EuRBPDB

Description

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000034947	-	892	-	ENSMUSP00000034947	216 (aa)	-	P24369
ENSMUST00000213785	-	3305	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000032383	Ppib	100	93.981	ENSG00000166794	PPIB	100	93.981	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000413	protein peptidyl-prolyl isomerization	-	ISO	Process
GO:0003755	peptidyl-prolyl cis-trans isomerase activity	21873635.	IBA	Function
GO:0003755	peptidyl-prolyl cis-trans isomerase activity	-	ISO	Function
GO:0005515	protein binding	27119146.	IPI	Function
GO:0005518	collagen binding	21873635.	IBA	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005783	endoplasmic reticulum	-	ISO	Component
GO:0005790	smooth endoplasmic reticulum	-	ISO	Component
GO:0006457	protein folding	-	IEA	Process
GO:0016018	cyclosporin A binding	21873635.	IBA	Function
GO:0016018	cyclosporin A binding	-	ISO	Function
GO:0016853	isomerase activity	-	IEA	Function
GO:0034663	endoplasmic reticulum chaperone complex	12475965.	IDA	Component
GO:0040018	positive regulation of multicellular organism growth	-	ISO	Process
GO:0042026	protein refolding	21873635.	IBA	Process
GO:0044794	positive regulation by host of viral process	-	ISO	Process
GO:0044829	positive regulation by host of viral genome replication	-	ISO	Process
GO:0048471	perinuclear region of cytoplasm	-	ISO	Component
GO:0050821	protein stabilization	-	ISO	Process
GO:0051082	unfolded protein binding	21873635.	IBA	Function
GO:0060348	bone development	-	ISO	Process
GO:0070063	RNA polymerase binding	-	ISO	Function