EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • RBPome
  • Expression
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSMUSG00000032480 (Gene tree)
Gene ID
72831
Gene Symbol
Dhx30
Alias
2810477H02Rik|C130058C04Rik|Ddx30|helG
Full Name
DEAH (Asp-Glu-Ala-His) box polypeptide 30
Gene Type
protein_coding
Species
Mus_musculus
Status
confidence
Strand
Minus strand
Length
33511 bases
Position
chr9:110084320-110117830
Accession
1920081
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMUSP00000143616DEADPF00270.296.5e-0611
ENSMUSP00000107622DEADPF00270.296.6e-0611
ENSMUSP00000142489DEADPF00270.296.6e-0611
ENSMUSP00000142549DEADPF00270.296.6e-0611
ENSMUSP00000143371DEADPF00270.296.6e-0611
ENSMUSP00000129174DEADPF00270.296.8e-0611
ENSMUSP00000142659DEADPF00270.296.8e-0611
ENSMUSP00000062622DEADPF00270.296.9e-0611
ENSMUSP00000143616HA2PF04408.231.6e-1211
ENSMUSP00000107622HA2PF04408.231.6e-1211
ENSMUSP00000142489HA2PF04408.231.6e-1211
ENSMUSP00000142549HA2PF04408.231.6e-1211
ENSMUSP00000143371HA2PF04408.231.6e-1211
ENSMUSP00000129174HA2PF04408.231.7e-1211
ENSMUSP00000142659HA2PF04408.231.7e-1211
ENSMUSP00000062622HA2PF04408.231.7e-1211
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
25993413Label-Free Protein RNA Interactome Analysis Identifies Khsrp Signaling Downstream of the p38/Mk2 Kinase Complex as a Critical Modulator of Cell Cycle ProgressionIC & MEF2015Boucas JDOI: 10.1371/journal.pone.0125745
27281784Identification of RNA binding Proteins in Macrophages by Interactome CaptureIC & RAW264.72016 Jun 8Liepelt ADOI: 10.1074/mcp.M115.056564
27452465The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart DiseaseIC & HL_12016 Jul 21Liao YDOI: 10.1016/j.celrep.2016.06.084
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMUST00000200593-716-ENSMUSP00000143607239 (aa)-A0A0G2JGL1
ENSMUST00000198843-431--- (aa)--
ENSMUST00000199529-4373-ENSMUSP000001424891194 (aa)-Q99PU8
ENSMUST00000199835-810-ENSMUSP00000142636175 (aa)-A0A0G2JE53
ENSMUST00000200476-706-ENSMUSP0000014370049 (aa)-A0A0G2JGU3
ENSMUST00000197785-420--- (aa)--
ENSMUST00000196171-3885XM_006512310ENSMUSP000001436161186 (aa)XP_006512373A0A0G2JGL8
ENSMUST00000196497-533-ENSMUSP00000143529101 (aa)-A0A0G2JGD9
ENSMUST00000196455-404-ENSMUSP00000143751134 (aa)-A0A0G2JGY7
ENSMUST00000197182-458-ENSMUSP0000014284612 (aa)-A0A0G2JEN9
ENSMUST00000196788-1424--- (aa)--
ENSMUST00000198443-659-ENSMUSP0000014283673 (aa)-A0A0G2JEN0
ENSMUST00000165596-3726-ENSMUSP000001291741217 (aa)-Q99PU8
ENSMUST00000200029-4241--- (aa)--
ENSMUST00000062368-3806-ENSMUSP000000626221223 (aa)-Q99PU8
ENSMUST00000200066-4623XM_006512303ENSMUSP000001433711194 (aa)XP_006512366Q99PU8
ENSMUST00000199693-515-ENSMUSP0000014327272 (aa)-A0A0G2JFR1
ENSMUST00000199801-614--- (aa)--
ENSMUST00000197979-198--- (aa)--
ENSMUST00000198425-3968XM_006512298ENSMUSP000001426591217 (aa)XP_006512361Q99PU8
ENSMUST00000196182-816--- (aa)--
ENSMUST00000197928-4441XM_006512305ENSMUSP000001425491194 (aa)XP_006512368Q99PU8
ENSMUST00000111991-3829-ENSMUSP000001076221194 (aa)-Q99PU8
ENSMUST00000198026-4574--- (aa)--
ENSMUST00000199332-368-ENSMUSP0000014295298 (aa)-A0A0G2JEY7
ENSMUST00000196914-473--- (aa)--
Gene Model
Click here to download ENSMUSG00000032480's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000032480's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMUSG00000032480Dhx306436.330ENSMUSG00000027770Dhx368136.330
ENSMUSG00000032480Dhx306232.861ENSMUSG00000042699Dhx95240.153
ENSMUSG00000032480Dhx305132.248ENSMUSG00000054003Tdrd99533.843
ENSMUSG00000032480Dhx306433.820ENSMUSG00000042426Dhx295535.000
ENSMUSG00000032480Dhx306233.492ENSMUSG00000035051Dhx576932.051
ENSMUSG00000032480Dhx305647.236ENSMUSG00000034653Ythdc27035.392
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMUSG00000032480Dhx3010097.655ENSG00000132153DHX3010097.835Homo_sapiens
ENSMUSG00000032480Dhx308853.389ENSAPOG00000023675dhx309449.690Acanthochromis_polyacanthus
ENSMUSG00000032480Dhx3010096.569ENSAMEG00000013112DHX3010095.649Ailuropoda_melanoleuca
ENSMUSG00000032480Dhx308456.250ENSACIG00000017560dhx309156.250Amphilophus_citrinellus
ENSMUSG00000032480Dhx309153.408ENSAOCG00000021534-9253.686Amphiprion_ocellaris
ENSMUSG00000032480Dhx309152.989ENSAOCG00000017807dhx309248.722Amphiprion_ocellaris
ENSMUSG00000032480Dhx309152.632ENSAPEG00000004418dhx309251.090Amphiprion_percula
ENSMUSG00000032480Dhx309749.563ENSATEG00000008254dhx309150.000Anabas_testudineus
ENSMUSG00000032480Dhx309677.528ENSAPLG00000015682DHX309977.528Anas_platyrhynchos
ENSMUSG00000032480Dhx309875.729ENSACAG00000017696DHX309975.533Anolis_carolinensis
ENSMUSG00000032480Dhx3010097.906ENSANAG00000024810DHX3010097.906Aotus_nancymaae
ENSMUSG00000032480Dhx308952.995ENSACLG00000020306dhx309153.646Astatotilapia_calliptera
ENSMUSG00000032480Dhx309650.131ENSAMXG00000014791dhx309054.767Astyanax_mexicanus
ENSMUSG00000032480Dhx309997.099ENSBTAG00000015833DHX309997.658Bos_taurus
ENSMUSG00000032480Dhx3010097.655ENSCJAG00000002635DHX3010097.655Callithrix_jacchus
ENSMUSG00000032480Dhx309898.012ENSCAFG00000013038DHX309998.319Canis_familiaris
ENSMUSG00000032480Dhx309898.012ENSCAFG00020020245DHX3010098.268Canis_lupus_dingo
ENSMUSG00000032480Dhx3010095.585ENSCHIG00000017619DHX3010095.306Capra_hircus
ENSMUSG00000032480Dhx3010098.074ENSTSYG00000005093DHX3010098.182Carlito_syrichta
ENSMUSG00000032480Dhx3010093.129ENSCAPG00000011764DHX309993.129Cavia_aperea
ENSMUSG00000032480Dhx3010097.322ENSCPOG00000000699DHX3010097.322Cavia_porcellus
ENSMUSG00000032480Dhx3010097.822ENSCCAG00000032718DHX3010097.922Cebus_capucinus
ENSMUSG00000032480Dhx3010097.822ENSCATG00000043684DHX3010097.922Cercocebus_atys
ENSMUSG00000032480Dhx3010097.571ENSCLAG00000014660DHX3010096.796Chinchilla_lanigera
ENSMUSG00000032480Dhx309997.355ENSCSAG00000015968DHX309997.918Chlorocebus_sabaeus
ENSMUSG00000032480Dhx3010092.630ENSCHOG00000002900DHX3010092.630Choloepus_hoffmanni
ENSMUSG00000032480Dhx309876.166ENSCPBG00000015231DHX309977.273Chrysemys_picta_bellii
ENSMUSG00000032480Dhx3010094.724ENSCANG00000007441DHX3010094.724Colobus_angolensis_palliatus
ENSMUSG00000032480Dhx3010099.414ENSCGRG00001014229Dhx3010099.241Cricetulus_griseus_chok1gshd
ENSMUSG00000032480Dhx3010099.414ENSCGRG00000017808Dhx3010099.241Cricetulus_griseus_crigri
ENSMUSG00000032480Dhx309647.906ENSCSEG00000009744dhx309148.125Cynoglossus_semilaevis
ENSMUSG00000032480Dhx308853.396ENSCVAG00000006410dhx309653.912Cyprinodon_variegatus
ENSMUSG00000032480Dhx309649.055ENSDARG00000077839dhx309054.237Danio_rerio
ENSMUSG00000032480Dhx3010091.152ENSDNOG00000018833DHX3010090.433Dasypus_novemcinctus
ENSMUSG00000032480Dhx3010098.325ENSDORG00000028764Dhx3010097.976Dipodomys_ordii
ENSMUSG00000032480Dhx307950.333ENSEBUG00000016505dhx308750.333Eptatretus_burgeri
ENSMUSG00000032480Dhx3010096.293ENSEASG00005008553DHX3010098.270Equus_asinus_asinus
ENSMUSG00000032480Dhx3010097.056ENSECAG00000015670DHX309998.612Equus_caballus
ENSMUSG00000032480Dhx307996.517ENSEEUG00000010045DHX308596.517Erinaceus_europaeus
ENSMUSG00000032480Dhx309849.535ENSELUG00000020943dhx309350.437Esox_lucius
ENSMUSG00000032480Dhx3010098.074ENSFCAG00000000438DHX3010098.182Felis_catus
ENSMUSG00000032480Dhx309776.661ENSFALG00000002009DHX309977.207Ficedula_albicollis
ENSMUSG00000032480Dhx3010096.985ENSFDAG00000007132DHX3010096.902Fukomys_damarensis
ENSMUSG00000032480Dhx309051.263ENSFHEG00000014172dhx309149.682Fundulus_heteroclitus
ENSMUSG00000032480Dhx307655.360ENSGMOG00000008538dhx308356.641Gadus_morhua
ENSMUSG00000032480Dhx309776.491ENSGALG00000039830DHX309977.035Gallus_gallus
ENSMUSG00000032480Dhx309749.481ENSGAFG00000021403dhx308954.243Gambusia_affinis
ENSMUSG00000032480Dhx309650.131ENSGACG00000017828dhx309750.133Gasterosteus_aculeatus
ENSMUSG00000032480Dhx309877.962ENSGAGG00000008495DHX309977.633Gopherus_agassizii
ENSMUSG00000032480Dhx3010097.655ENSGGOG00000004307DHX3010097.749Gorilla_gorilla
ENSMUSG00000032480Dhx308953.096ENSHBUG00000006060dhx309453.646Haplochromis_burtoni
ENSMUSG00000032480Dhx3010096.241ENSHGLG00000012643DHX309996.296Heterocephalus_glaber_female
ENSMUSG00000032480Dhx3010095.900ENSHGLG00100011194DHX3010095.114Heterocephalus_glaber_male
ENSMUSG00000032480Dhx308854.668ENSHCOG00000018612dhx308855.628Hippocampus_comes
ENSMUSG00000032480Dhx309650.524ENSIPUG00000012285dhx309250.576Ictalurus_punctatus
ENSMUSG00000032480Dhx3010098.576ENSSTOG00000022367DHX3010098.576Ictidomys_tridecemlineatus
ENSMUSG00000032480Dhx309797.745ENSJJAG00000007025-9897.745Jaculus_jaculus
ENSMUSG00000032480Dhx309847.894ENSKMAG00000015124dhx309352.960Kryptolebias_marmoratus
ENSMUSG00000032480Dhx309649.172ENSLBEG00000016705dhx308654.221Labrus_bergylta
ENSMUSG00000032480Dhx306664.015ENSLACG00000009404DHX309664.112Latimeria_chalumnae
ENSMUSG00000032480Dhx309755.293ENSLOCG00000010283dhx309855.340Lepisosteus_oculatus
ENSMUSG00000032480Dhx3010095.094ENSLAFG00000028880DHX3010096.184Loxodonta_africana
ENSMUSG00000032480Dhx3010097.822ENSMFAG00000033894DHX3010097.922Macaca_fascicularis
ENSMUSG00000032480Dhx3010097.822ENSMMUG00000003820DHX3010097.639Macaca_mulatta
ENSMUSG00000032480Dhx3010097.822ENSMNEG00000035478DHX3010097.922Macaca_nemestrina
ENSMUSG00000032480Dhx3010097.655ENSMLEG00000023203DHX3010097.749Mandrillus_leucophaeus
ENSMUSG00000032480Dhx309749.743ENSMAMG00000014611dhx308954.777Mastacembelus_armatus
ENSMUSG00000032480Dhx308952.995ENSMZEG00005025092dhx309248.940Maylandia_zebra
ENSMUSG00000032480Dhx309675.457ENSMGAG00000001216DHX3010075.457Meleagris_gallopavo
ENSMUSG00000032480Dhx3010099.157ENSMAUG00000021404Dhx3010099.157Mesocricetus_auratus
ENSMUSG00000032480Dhx3010098.074ENSMICG00000008784DHX3010098.182Microcebus_murinus
ENSMUSG00000032480Dhx3010099.330ENSMOCG00000009984Dhx3010099.073Microtus_ochrogaster
ENSMUSG00000032480Dhx308654.887ENSMMOG00000016828dhx309554.095Mola_mola
ENSMUSG00000032480Dhx309894.564ENSMODG00000014285DHX309992.062Monodelphis_domestica
ENSMUSG00000032480Dhx309052.675ENSMALG00000020479dhx309252.941Monopterus_albus
ENSMUSG00000032480Dhx3010099.509MGP_CAROLIEiJ_G0032725Dhx3010099.509Mus_caroli
ENSMUSG00000032480Dhx3010099.749MGP_PahariEiJ_G0015592Dhx3010099.749Mus_pahari
ENSMUSG00000032480Dhx3010099.749MGP_SPRETEiJ_G0033873Dhx3010099.749Mus_spretus
ENSMUSG00000032480Dhx3010098.074ENSMPUG00000015013DHX3010098.074Mustela_putorius_furo
ENSMUSG00000032480Dhx3010098.820ENSNGAG00000023148Dhx3010098.820Nannospalax_galili
ENSMUSG00000032480Dhx308854.079ENSNBRG00000012539dhx309154.672Neolamprologus_brichardi
ENSMUSG00000032480Dhx309395.581ENSNLEG00000006367DHX3010095.581Nomascus_leucogenys
ENSMUSG00000032480Dhx3010094.807ENSMEUG00000002926DHX3010094.807Notamacropus_eugenii
ENSMUSG00000032480Dhx3010097.822ENSOPRG00000017190DHX3010097.822Ochotona_princeps
ENSMUSG00000032480Dhx3010096.817ENSODEG00000012770-10096.037Octodon_degus
ENSMUSG00000032480Dhx309275.137ENSODEG00000007220-9674.205Octodon_degus
ENSMUSG00000032480Dhx309650.087ENSONIG00000009631dhx309750.623Oreochromis_niloticus
ENSMUSG00000032480Dhx309781.385ENSOANG00000010513-9981.385Ornithorhynchus_anatinus
ENSMUSG00000032480Dhx309897.926ENSOCUG00000006515DHX309996.532Oryctolagus_cuniculus
ENSMUSG00000032480Dhx309749.432ENSORLG00000017276dhx308953.879Oryzias_latipes
ENSMUSG00000032480Dhx309749.258ENSORLG00020010224dhx308953.936Oryzias_latipes_hni
ENSMUSG00000032480Dhx309848.417ENSORLG00015010148dhx309153.530Oryzias_latipes_hsok
ENSMUSG00000032480Dhx309648.395ENSOMEG00000005351dhx308954.316Oryzias_melastigma
ENSMUSG00000032480Dhx3010096.484ENSOGAG00000012526DHX309996.532Otolemur_garnettii
ENSMUSG00000032480Dhx308198.295ENSOARG00000002897DHX309998.295Ovis_aries
ENSMUSG00000032480Dhx3010094.640ENSPPAG00000034330DHX3010095.246Pan_paniscus
ENSMUSG00000032480Dhx3010098.074ENSPPRG00000022811DHX3010098.182Panthera_pardus
ENSMUSG00000032480Dhx309395.524ENSPTIG00000015582DHX309595.524Panthera_tigris_altaica
ENSMUSG00000032480Dhx3010097.739ENSPTRG00000014877DHX3010097.835Pan_troglodytes
ENSMUSG00000032480Dhx309996.809ENSPANG00000014291DHX3010096.809Papio_anubis
ENSMUSG00000032480Dhx309055.992ENSPKIG00000000741dhx309156.739Paramormyrops_kingsleyae
ENSMUSG00000032480Dhx309666.413ENSPSIG00000011740DHX309966.163Pelodiscus_sinensis
ENSMUSG00000032480Dhx3010099.330ENSPEMG00000014177Dhx3010098.988Peromyscus_maniculatus_bairdii
ENSMUSG00000032480Dhx309645.830ENSPMAG00000001958dhx3010045.830Petromyzon_marinus
ENSMUSG00000032480Dhx309894.737ENSPCIG00000013492DHX309592.150Phascolarctos_cinereus
ENSMUSG00000032480Dhx305956.281ENSPFOG00000015329dhx308956.281Poecilia_formosa
ENSMUSG00000032480Dhx308853.903ENSPMEG00000022750dhx308954.329Poecilia_mexicana
ENSMUSG00000032480Dhx308853.702ENSPREG00000010021dhx309254.332Poecilia_reticulata
ENSMUSG00000032480Dhx3010097.571ENSPPYG00000013914DHX3010097.571Pongo_abelii
ENSMUSG00000032480Dhx307797.822ENSPCAG00000002209DHX307497.822Procavia_capensis
ENSMUSG00000032480Dhx3010098.157ENSPCOG00000025552DHX3010098.268Propithecus_coquereli
ENSMUSG00000032480Dhx309997.540ENSPVAG00000010183DHX3010097.540Pteropus_vampyrus
ENSMUSG00000032480Dhx308053.975ENSPNYG00000014217dhx308454.672Pundamilia_nyererei
ENSMUSG00000032480Dhx309650.217ENSPNAG00000002192dhx309254.107Pygocentrus_nattereri
ENSMUSG00000032480Dhx3010099.414ENSRNOG00000029194Dhx3010099.414Rattus_norvegicus
ENSMUSG00000032480Dhx3010094.724ENSRBIG00000034012DHX3010094.724Rhinopithecus_bieti
ENSMUSG00000032480Dhx3010097.822ENSRROG00000039143DHX3010097.922Rhinopithecus_roxellana
ENSMUSG00000032480Dhx3010094.640ENSSBOG00000035810DHX3010094.640Saimiri_boliviensis_boliviensis
ENSMUSG00000032480Dhx3010094.975ENSSHAG00000006980DHX3010094.975Sarcophilus_harrisii
ENSMUSG00000032480Dhx309749.782ENSSFOG00015018714dhx308955.060Scleropages_formosus
ENSMUSG00000032480Dhx308853.396ENSSMAG00000020068dhx308953.552Scophthalmus_maximus
ENSMUSG00000032480Dhx309650.174ENSSDUG00000019188dhx309249.824Seriola_dumerili
ENSMUSG00000032480Dhx309150.733ENSSLDG00000008176dhx309950.227Seriola_lalandi_dorsalis
ENSMUSG00000032480Dhx309875.508ENSSPUG00000019160DHX309776.244Sphenodon_punctatus
ENSMUSG00000032480Dhx309649.440ENSSPAG00000022184dhx308853.568Stegastes_partitus
ENSMUSG00000032480Dhx309997.355ENSSSCG00000011342DHX3010097.681Sus_scrofa
ENSMUSG00000032480Dhx309677.913ENSTGUG00000000112-9978.000Taeniopygia_guttata
ENSMUSG00000032480Dhx308562.626ENSTRUG00000020111DHX309162.626Takifugu_rubripes
ENSMUSG00000032480Dhx308950.840ENSTRUG00000011263dhx309550.853Takifugu_rubripes
ENSMUSG00000032480Dhx309849.697ENSTNIG00000008523dhx309749.562Tetraodon_nigroviridis
ENSMUSG00000032480Dhx3010097.822ENSTTRG00000002314DHX3010097.822Tursiops_truncatus
ENSMUSG00000032480Dhx309098.240ENSUAMG00000017241DHX3010098.240Ursus_americanus
ENSMUSG00000032480Dhx309085.848ENSUMAG00000001274DHX309386.084Ursus_maritimus
ENSMUSG00000032480Dhx309297.711ENSVVUG00000029792DHX308896.422Vulpes_vulpes
ENSMUSG00000032480Dhx309857.483ENSXETG00000004213dhx309857.732Xenopus_tropicalis
ENSMUSG00000032480Dhx309152.722ENSXCOG00000015021dhx309453.389Xiphophorus_couchianus
ENSMUSG00000032480Dhx309848.225ENSXMAG00000016336dhx309054.329Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000166nucleotide binding-IEAFunction
GO:0002151G-quadruplex RNA binding21873635.IBAFunction
GO:0003676nucleic acid binding-IEAFunction
GO:0003682chromatin binding-ISOFunction
GO:0003723RNA binding21873635.IBAFunction
GO:0003723RNA binding-ISOFunction
GO:0003725double-stranded RNA binding21266579.ISOFunction
GO:0004003ATP-dependent DNA helicase activity21873635.IBAFunction
GO:0004004ATP-dependent RNA helicase activity25219788.IDAFunction
GO:0004004ATP-dependent RNA helicase activity-ISOFunction
GO:0004386helicase activity-IEAFunction
GO:0005524ATP binding-IEAFunction
GO:0005634nucleus21873635.IBAComponent
GO:0005737cytoplasm25219788.IDAComponent
GO:0005737cytoplasm-ISOComponent
GO:0005739mitochondrion-ISOComponent
GO:0005829cytosol-ISOComponent
GO:0007417central nervous system development25219788.IDAProcess
GO:0016787hydrolase activity-IEAFunction
GO:0034459ATP-dependent 3'-5' RNA helicase activity21873635.IBAFunction
GO:0035770ribonucleoprotein granule-ISOComponent
GO:0042254ribosome biogenesis-IEAProcess
GO:0042645mitochondrial nucleoid-ISOComponent
GO:1902775mitochondrial large ribosomal subunit assembly-ISOProcess

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us