EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000032514 (Gene tree)
Gene ID: 74052
Gene Symbol: Ttc21a
Alias: 4921538N17Rik|Thm2
Full Name: tetratricopeptide repeat domain 21A
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 30188 bases
Position: chr9:119937606-119967793
Accession: 1921302
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000035100	PPR	PF01535.20	1.5e-05	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000159128	-	4041	-	-	- (aa)	-	-
ENSMUST00000035100	-	4182	XM_006512321	ENSMUSP00000035100	1314 (aa)	XP_006512384	Q8C0S4
ENSMUST00000161967	-	827	-	-	- (aa)	-	-
ENSMUST00000160790	-	3326	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000032514's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000032514's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000032514	Ttc21a	55	82.069	ENSBTAG00000010477	TTC21A	100	82.069	Bos_taurus
ENSMUSG00000032514	Ttc21a	55	82.483	ENSCHIG00000018055	TTC21A	100	82.483	Capra_hircus
ENSMUSG00000032514	Ttc21a	99	89.510	ENSCGRG00001020151	Ttc21a	100	89.510	Cricetulus_griseus_chok1gshd
ENSMUSG00000032514	Ttc21a	99	89.510	ENSCGRG00000012945	Ttc21a	95	89.510	Cricetulus_griseus_crigri
ENSMUSG00000032514	Ttc21a	99	69.290	ENSDORG00000027538	Ttc21a	99	69.290	Dipodomys_ordii
ENSMUSG00000032514	Ttc21a	87	75.894	ENSETEG00000018753	TTC21A	87	75.894	Echinops_telfairi
ENSMUSG00000032514	Ttc21a	100	82.738	ENSJJAG00000005140	Ttc21a	100	82.738	Jaculus_jaculus
ENSMUSG00000032514	Ttc21a	100	96.347	MGP_PahariEiJ_G0015676	Ttc21a	100	96.347	Mus_pahari
ENSMUSG00000032514	Ttc21a	100	99.163	MGP_SPRETEiJ_G0033957	Ttc21a	100	99.163	Mus_spretus
ENSMUSG00000032514	Ttc21a	100	75.342	ENSPPRG00000012924	TTC21A	100	75.342	Panthera_pardus
ENSMUSG00000032514	Ttc21a	99	91.318	ENSPEMG00000010809	Ttc21a	99	91.318	Peromyscus_maniculatus_bairdii
ENSMUSG00000032514	Ttc21a	100	95.205	ENSRNOG00000034089	Ttc21a	100	95.205	Rattus_norvegicus
ENSMUSG00000032514	Ttc21a	100	77.338	ENSUAMG00000020073	TTC21A	99	84.256	Ursus_americanus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003674	molecular_function	-	ND	Function
GO:0030991	intraciliary transport particle A	21873635.	IBA	Component
GO:0035721	intraciliary retrograde transport	21873635.	IBA	Process
GO:0061512	protein localization to cilium	21873635.	IBA	Process