EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Expression
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSMUSG00000032580 (Gene tree)
Gene ID
83486
Gene Symbol
Rbm5
Alias
D030069N10Rik
Full Name
RNA binding motif protein 5
Gene Type
protein_coding
Species
Mus_musculus
Status
confidence
Strand
Minus strand
Length
30626 bases
Position
chr9:107740371-107770996
Accession
1933204
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMUSP00000138380zf-RanBPPF00641.185.9e-1011
ENSMUSP00000035199zf-RanBPPF00641.182.1e-0911
ENSMUSP00000138379zf-RanBPPF00641.182.1e-0911
ENSMUSP00000035199RRM_1PF00076.223.4e-1411
ENSMUSP00000138379RRM_1PF00076.223.4e-1411
ENSMUSP00000138380RRM_1PF00076.223.7e-0811
ENSMUSP00000035199G-patchPF01585.231.1e-1811
ENSMUSP00000138379G-patchPF01585.231.2e-1811
ENSMUSP00000138526G-patchPF01585.231.9e-1611
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
27281784Identification of RNA binding Proteins in Macrophages by Interactome CaptureIC & RAW264.72016 Jun 8Liepelt ADOI: 10.1074/mcp.M115.056564
23912277The RNA binding protein repertoire of embryonic stem cellsIC & mESC2013 Aug 4Kwon SCDOI: 10.1038/nsmb.2638
27452465The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart DiseaseIC & HL_12016 Jul 21Liao YDOI: 10.1016/j.celrep.2016.06.084
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMUST00000182659-3205XM_006511870ENSMUSP00000138379815 (aa)XP_006511933Q91YE7
ENSMUST00000192130-784-ENSMUSP00000142194150 (aa)-S4R184
ENSMUST00000035199-3064XM_011242921ENSMUSP00000035199814 (aa)XP_011241223Q91YE7
ENSMUST00000194801-2691--- (aa)--
ENSMUST00000181993-1775--- (aa)--
ENSMUST00000182332-793--- (aa)--
ENSMUST00000182026-835-ENSMUSP00000138526154 (aa)-S4R273
ENSMUST00000182792-4718--- (aa)--
ENSMUST00000182007-1939--- (aa)--
ENSMUST00000182022-869-ENSMUSP00000138390137 (aa)-S4R1V5
ENSMUST00000182371-2986-ENSMUSP00000138119150 (aa)-S4R184
ENSMUST00000193342-896-ENSMUSP00000141829175 (aa)-A0A0A6YX44
ENSMUST00000182518-1272--- (aa)--
ENSMUST00000194400-322-ENSMUSP00000142324101 (aa)-A0A0A6YY86
ENSMUST00000182856-539--- (aa)--
ENSMUST00000194682-502--- (aa)--
ENSMUST00000182836-500--- (aa)--
ENSMUST00000182304-850-ENSMUSP00000138380251 (aa)-S4R1U7
ENSMUST00000183307-6321--- (aa)--
ENSMUST00000182421-1704-ENSMUSP00000138778115 (aa)-S4R2T4
ENSMUST00000182422-600--- (aa)--
ENSMUST00000183248-781-ENSMUSP00000138294115 (aa)-S4R1N4
ENSMUST00000182215-631--- (aa)--
ENSMUST00000182073-897--- (aa)--
Gene Model
Click here to download ENSMUSG00000032580's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000032580's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMUSG00000032580Rbm57434.783ENSMUSG00000039210Gpatch25437.600
ENSMUSG00000032580Rbm58869.784ENSMUSG00000031060Rbm109851.294
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMUSG00000032580Rbm510099.602ENSG00000003756RBM5100100.000Homo_sapiens
ENSMUSG00000032580Rbm510062.500ENSAPOG00000016625rbm510061.628Acanthochromis_polyacanthus
ENSMUSG00000032580Rbm59570.270ENSAPOG00000006011-10060.263Acanthochromis_polyacanthus
ENSMUSG00000032580Rbm510099.602ENSAMEG00000012005RBM510098.160Ailuropoda_melanoleuca
ENSMUSG00000032580Rbm59566.892ENSACIG00000021310-9957.298Amphilophus_citrinellus
ENSMUSG00000032580Rbm59069.286ENSACIG00000007571rbm59869.312Amphilophus_citrinellus
ENSMUSG00000032580Rbm510062.500ENSAOCG00000002880rbm510060.995Amphiprion_ocellaris
ENSMUSG00000032580Rbm59569.595ENSAOCG00000017312-9959.829Amphiprion_ocellaris
ENSMUSG00000032580Rbm59569.595ENSAPEG00000018222RBM510060.570Amphiprion_percula
ENSMUSG00000032580Rbm59069.504ENSAPEG00000011862rbm59260.513Amphiprion_percula
ENSMUSG00000032580Rbm59568.919ENSATEG00000003838-10057.944Anabas_testudineus
ENSMUSG00000032580Rbm510062.891ENSATEG00000024663rbm510061.098Anabas_testudineus
ENSMUSG00000032580Rbm59092.029ENSAPLG00000011176RBM59986.412Anas_platyrhynchos
ENSMUSG00000032580Rbm510084.772ENSACAG00000008580RBM510085.234Anolis_carolinensis
ENSMUSG00000032580Rbm510099.602ENSANAG00000025199RBM510098.160Aotus_nancymaae
ENSMUSG00000032580Rbm58975.610ENSACLG00000024198RBM510056.874Astatotilapia_calliptera
ENSMUSG00000032580Rbm510063.035ENSACLG00000012748rbm510061.144Astatotilapia_calliptera
ENSMUSG00000032580Rbm59074.286ENSAMXG00000008146rbm59962.204Astyanax_mexicanus
ENSMUSG00000032580Rbm510099.602ENSBTAG00000006330RBM510097.669Bos_taurus
ENSMUSG00000032580Rbm510099.602ENSCJAG00000004740RBM510098.160Callithrix_jacchus
ENSMUSG00000032580Rbm510099.602ENSCAFG00000010866RBM510098.282Canis_familiaris
ENSMUSG00000032580Rbm510099.602ENSCAFG00020022126RBM510098.282Canis_lupus_dingo
ENSMUSG00000032580Rbm510099.602ENSCHIG00000018435RBM510097.914Capra_hircus
ENSMUSG00000032580Rbm510097.610ENSTSYG00000004158RBM510096.991Carlito_syrichta
ENSMUSG00000032580Rbm510091.235ENSCAPG00000013495RBM510079.853Cavia_aperea
ENSMUSG00000032580Rbm510099.602ENSCPOG00000008151RBM510097.791Cavia_porcellus
ENSMUSG00000032580Rbm59899.593ENSCCAG00000026401RBM59998.272Cebus_capucinus
ENSMUSG00000032580Rbm510099.602ENSCATG00000041038RBM510098.160Cercocebus_atys
ENSMUSG00000032580Rbm510099.602ENSCLAG00000007873RBM510097.791Chinchilla_lanigera
ENSMUSG00000032580Rbm510099.602ENSCSAG00000014401RBM510098.160Chlorocebus_sabaeus
ENSMUSG00000032580Rbm58186.082ENSCHOG00000009429RBM58586.082Choloepus_hoffmanni
ENSMUSG00000032580Rbm510086.610ENSCPBG00000002406RBM510087.455Chrysemys_picta_bellii
ENSMUSG00000032580Rbm510095.828ENSCANG00000031250RBM510095.828Colobus_angolensis_palliatus
ENSMUSG00000032580Rbm510099.602ENSCGRG00001010543Rbm510098.282Cricetulus_griseus_chok1gshd
ENSMUSG00000032580Rbm510099.602ENSCGRG00000008475Rbm510098.282Cricetulus_griseus_crigri
ENSMUSG00000032580Rbm510064.062ENSCSEG00000000596rbm59759.579Cynoglossus_semilaevis
ENSMUSG00000032580Rbm510062.353ENSCVAG00000005655rbm510060.859Cyprinodon_variegatus
ENSMUSG00000032580Rbm59072.857ENSDARG00000098280rbm510063.245Danio_rerio
ENSMUSG00000032580Rbm510099.602ENSDNOG00000011756RBM510097.914Dasypus_novemcinctus
ENSMUSG00000032580Rbm510099.602ENSDORG00000007692Rbm510098.405Dipodomys_ordii
ENSMUSG00000032580Rbm59093.478ENSETEG00000012773RBM59391.138Echinops_telfairi
ENSMUSG00000032580Rbm58868.613ENSEBUG00000017034rbm57963.361Eptatretus_burgeri
ENSMUSG00000032580Rbm510099.602ENSEASG00005011835RBM510098.405Equus_asinus_asinus
ENSMUSG00000032580Rbm510099.602ENSECAG00000020447RBM510098.405Equus_caballus
ENSMUSG00000032580Rbm59099.010ENSEEUG00000005943RBM59199.010Erinaceus_europaeus
ENSMUSG00000032580Rbm510067.054ENSELUG00000022467rbm510060.698Esox_lucius
ENSMUSG00000032580Rbm510099.602ENSFCAG00000014639RBM510098.160Felis_catus
ENSMUSG00000032580Rbm59092.029ENSFALG00000008828RBM58386.675Ficedula_albicollis
ENSMUSG00000032580Rbm510099.203ENSFDAG00000001897RBM510094.853Fukomys_damarensis
ENSMUSG00000032580Rbm510063.320ENSFHEG00000015954rbm510076.190Fundulus_heteroclitus
ENSMUSG00000032580Rbm59567.568ENSGMOG00000007810-8759.172Gadus_morhua
ENSMUSG00000032580Rbm59962.031ENSGMOG00000016224rbm59262.353Gadus_morhua
ENSMUSG00000032580Rbm59092.029ENSGALG00000039288RBM58386.675Gallus_gallus
ENSMUSG00000032580Rbm510062.353ENSGAFG00000010690rbm59667.826Gambusia_affinis
ENSMUSG00000032580Rbm59567.568ENSGACG00000000858-10057.143Gasterosteus_aculeatus
ENSMUSG00000032580Rbm510062.950ENSGACG00000010469rbm510061.814Gasterosteus_aculeatus
ENSMUSG00000032580Rbm59096.377ENSGAGG00000007935RBM59987.231Gopherus_agassizii
ENSMUSG00000032580Rbm510099.602ENSGGOG00000014490RBM510098.037Gorilla_gorilla
ENSMUSG00000032580Rbm510063.424ENSHBUG00000001941rbm510060.648Haplochromis_burtoni
ENSMUSG00000032580Rbm58975.610ENSHBUG00000011901-10057.227Haplochromis_burtoni
ENSMUSG00000032580Rbm510099.602ENSHGLG00000014844RBM510097.794Heterocephalus_glaber_female
ENSMUSG00000032580Rbm510099.602ENSHGLG00100010739RBM510097.914Heterocephalus_glaber_male
ENSMUSG00000032580Rbm510060.465ENSHCOG00000017110rbm59958.714Hippocampus_comes
ENSMUSG00000032580Rbm58970.803ENSHCOG00000004536-10052.218Hippocampus_comes
ENSMUSG00000032580Rbm510066.409ENSIPUG00000000640rbm510063.020Ictalurus_punctatus
ENSMUSG00000032580Rbm510099.602ENSSTOG00000013856RBM510098.037Ictidomys_tridecemlineatus
ENSMUSG00000032580Rbm510099.602ENSJJAG00000008844Rbm510098.160Jaculus_jaculus
ENSMUSG00000032580Rbm510062.595ENSKMAG00000006663rbm510061.332Kryptolebias_marmoratus
ENSMUSG00000032580Rbm59565.541ENSLBEG00000010877-9458.392Labrus_bergylta
ENSMUSG00000032580Rbm59566.216ENSLBEG00000002522-9450.253Labrus_bergylta
ENSMUSG00000032580Rbm59974.696ENSLACG00000016572RBM510075.939Latimeria_chalumnae
ENSMUSG00000032580Rbm59077.536ENSLOCG00000010774rbm510062.557Lepisosteus_oculatus
ENSMUSG00000032580Rbm5100100.000ENSLAFG00000006733RBM510098.162Loxodonta_africana
ENSMUSG00000032580Rbm510099.602ENSMFAG00000031609RBM510098.160Macaca_fascicularis
ENSMUSG00000032580Rbm59899.593ENSMMUG00000004921RBM59998.148Macaca_mulatta
ENSMUSG00000032580Rbm510099.602ENSMNEG00000044394RBM510098.037Macaca_nemestrina
ENSMUSG00000032580Rbm510099.602ENSMLEG00000034689RBM510094.356Mandrillus_leucophaeus
ENSMUSG00000032580Rbm59571.622ENSMAMG00000023948-10059.250Mastacembelus_armatus
ENSMUSG00000032580Rbm59176.190ENSMAMG00000017277rbm59976.190Mastacembelus_armatus
ENSMUSG00000032580Rbm510063.035ENSMZEG00005015328rbm510061.144Maylandia_zebra
ENSMUSG00000032580Rbm59564.865ENSMZEG00005010035-10056.639Maylandia_zebra
ENSMUSG00000032580Rbm59092.029ENSMGAG00000003972RBM510086.772Meleagris_gallopavo
ENSMUSG00000032580Rbm59899.593ENSMAUG00000020572Rbm59898.519Mesocricetus_auratus
ENSMUSG00000032580Rbm510099.203ENSMICG00000016179RBM510098.160Microcebus_murinus
ENSMUSG00000032580Rbm510099.203ENSMOCG00000017479Rbm510098.405Microtus_ochrogaster
ENSMUSG00000032580Rbm59070.000ENSMMOG00000021804-9352.399Mola_mola
ENSMUSG00000032580Rbm59069.286ENSMMOG00000015342rbm510054.662Mola_mola
ENSMUSG00000032580Rbm510096.414ENSMODG00000012301RBM510094.247Monodelphis_domestica
ENSMUSG00000032580Rbm59071.942ENSMALG00000016769-10057.381Monopterus_albus
ENSMUSG00000032580Rbm5100100.000MGP_CAROLIEiJ_G0032660Rbm5100100.000Mus_caroli
ENSMUSG00000032580Rbm510099.755MGP_PahariEiJ_G0015528Rbm510099.755Mus_pahari
ENSMUSG00000032580Rbm510099.877MGP_SPRETEiJ_G0033805Rbm510099.877Mus_spretus
ENSMUSG00000032580Rbm510098.406ENSMLUG00000007875RBM510096.810Myotis_lucifugus
ENSMUSG00000032580Rbm510099.602ENSNGAG00000011777Rbm510098.282Nannospalax_galili
ENSMUSG00000032580Rbm59566.216ENSNBRG00000004400RBM59557.360Neolamprologus_brichardi
ENSMUSG00000032580Rbm510063.035ENSNBRG00000018097rbm510060.532Neolamprologus_brichardi
ENSMUSG00000032580Rbm510099.602ENSNLEG00000006943RBM510098.037Nomascus_leucogenys
ENSMUSG00000032580Rbm59987.546ENSMEUG00000012994RBM510087.793Notamacropus_eugenii
ENSMUSG00000032580Rbm59393.767ENSOPRG00000015154RBM59393.767Ochotona_princeps
ENSMUSG00000032580Rbm510090.552ENSODEG00000019111-10089.816Octodon_degus
ENSMUSG00000032580Rbm510099.602ENSODEG00000016254-10097.791Octodon_degus
ENSMUSG00000032580Rbm59566.892ENSONIG00000019007RBM510057.957Oreochromis_niloticus
ENSMUSG00000032580Rbm510063.813ENSONIG00000004107rbm510060.995Oreochromis_niloticus
ENSMUSG00000032580Rbm59096.377ENSOANG00000006557RBM510092.867Ornithorhynchus_anatinus
ENSMUSG00000032580Rbm510096.813ENSOCUG00000011652RBM510096.810Oryctolagus_cuniculus
ENSMUSG00000032580Rbm59071.942ENSORLG00000001053-10054.578Oryzias_latipes
ENSMUSG00000032580Rbm510062.500ENSORLG00000003369rbm59959.951Oryzias_latipes
ENSMUSG00000032580Rbm510062.109ENSORLG00020021744rbm510060.023Oryzias_latipes_hni
ENSMUSG00000032580Rbm58972.464ENSORLG00020006782-9853.234Oryzias_latipes_hni
ENSMUSG00000032580Rbm58973.188ENSORLG00015002854-9853.779Oryzias_latipes_hsok
ENSMUSG00000032580Rbm59176.190ENSORLG00015018379rbm59976.190Oryzias_latipes_hsok
ENSMUSG00000032580Rbm59057.447ENSOMEG00000010653-8962.500Oryzias_melastigma
ENSMUSG00000032580Rbm59072.857ENSOMEG00000002219rbm510061.182Oryzias_melastigma
ENSMUSG00000032580Rbm59394.172ENSOGAG00000004205RBM510094.172Otolemur_garnettii
ENSMUSG00000032580Rbm510099.602ENSOARG00000010923RBM510097.914Ovis_aries
ENSMUSG00000032580Rbm510099.602ENSPPAG00000043010RBM510098.160Pan_paniscus
ENSMUSG00000032580Rbm510099.602ENSPPRG00000005404RBM510098.160Panthera_pardus
ENSMUSG00000032580Rbm510099.602ENSPTIG00000000962RBM510098.160Panthera_tigris_altaica
ENSMUSG00000032580Rbm510099.602ENSPTRG00000014946RBM510098.160Pan_troglodytes
ENSMUSG00000032580Rbm510099.602ENSPANG00000018507RBM510098.160Papio_anubis
ENSMUSG00000032580Rbm510065.354ENSPKIG00000024837RBM510060.209Paramormyrops_kingsleyae
ENSMUSG00000032580Rbm56263.462ENSPKIG00000022215-8463.462Paramormyrops_kingsleyae
ENSMUSG00000032580Rbm59059.420ENSPKIG00000019187-10057.528Paramormyrops_kingsleyae
ENSMUSG00000032580Rbm59094.928ENSPSIG00000016073RBM510088.392Pelodiscus_sinensis
ENSMUSG00000032580Rbm59859.109ENSPMGG00000004719-9973.810Periophthalmus_magnuspinnatus
ENSMUSG00000032580Rbm59560.403ENSPMGG00000017347rbm510055.215Periophthalmus_magnuspinnatus
ENSMUSG00000032580Rbm58867.143ENSPMAG00000001998rbm59245.981Petromyzon_marinus
ENSMUSG00000032580Rbm510096.414ENSPCIG00000021531RBM510094.247Phascolarctos_cinereus
ENSMUSG00000032580Rbm510063.281ENSPLAG00000006318rbm510061.486Poecilia_latipinna
ENSMUSG00000032580Rbm59070.714ENSPMEG00000008651rbm59962.131Poecilia_mexicana
ENSMUSG00000032580Rbm510064.822ENSPMEG00000004295rbm510062.041Poecilia_mexicana
ENSMUSG00000032580Rbm510063.137ENSPREG00000003795rbm510060.481Poecilia_reticulata
ENSMUSG00000032580Rbm59889.388ENSPCAG00000005459RBM58487.162Procavia_capensis
ENSMUSG00000032580Rbm510099.602ENSPCOG00000025840RBM510098.160Propithecus_coquereli
ENSMUSG00000032580Rbm510099.602ENSPVAG00000006812RBM510095.460Pteropus_vampyrus
ENSMUSG00000032580Rbm510063.035ENSPNYG00000014787rbm510060.532Pundamilia_nyererei
ENSMUSG00000032580Rbm59566.216ENSPNYG00000006361RBM59957.703Pundamilia_nyererei
ENSMUSG00000032580Rbm510065.637ENSPNAG00000012070rbm510061.944Pygocentrus_nattereri
ENSMUSG00000032580Rbm510099.602ENSRNOG00000018153Rbm510099.141Rattus_norvegicus
ENSMUSG00000032580Rbm510099.602ENSRBIG00000012679RBM510097.914Rhinopithecus_bieti
ENSMUSG00000032580Rbm510099.602ENSRROG00000041331RBM510097.914Rhinopithecus_roxellana
ENSMUSG00000032580Rbm510099.602ENSSBOG00000006324RBM510098.282Saimiri_boliviensis_boliviensis
ENSMUSG00000032580Rbm510096.414ENSSHAG00000018260RBM510094.601Sarcophilus_harrisii
ENSMUSG00000032580Rbm510067.589ENSSFOG00015019645-10063.349Scleropages_formosus
ENSMUSG00000032580Rbm59076.812ENSSFOG00015019052rbm59462.295Scleropages_formosus
ENSMUSG00000032580Rbm510062.500ENSSMAG00000017106rbm510060.844Scophthalmus_maximus
ENSMUSG00000032580Rbm510064.202ENSSDUG00000019775rbm510062.181Seriola_dumerili
ENSMUSG00000032580Rbm510064.202ENSSLDG00000002329rbm510062.153Seriola_lalandi_dorsalis
ENSMUSG00000032580Rbm59569.595ENSSLDG00000015996-10059.604Seriola_lalandi_dorsalis
ENSMUSG00000032580Rbm59888.980ENSSARG00000009724-67100.000Sorex_araneus
ENSMUSG00000032580Rbm59093.478ENSSPUG00000001876RBM58585.733Sphenodon_punctatus
ENSMUSG00000032580Rbm59569.595ENSSPAG00000020011-10060.259Stegastes_partitus
ENSMUSG00000032580Rbm510061.440ENSSPAG00000019638rbm510061.520Stegastes_partitus
ENSMUSG00000032580Rbm510099.602ENSSSCG00000011395RBM510097.914Sus_scrofa
ENSMUSG00000032580Rbm59092.029ENSTGUG00000006417RBM59880.369Taeniopygia_guttata
ENSMUSG00000032580Rbm510063.386ENSTRUG00000008292rbm59867.429Takifugu_rubripes
ENSMUSG00000032580Rbm59066.438ENSTNIG00000014742rbm57863.603Tetraodon_nigroviridis
ENSMUSG00000032580Rbm510093.227ENSTBEG00000005424RBM510089.816Tupaia_belangeri
ENSMUSG00000032580Rbm510089.693ENSTTRG00000007717RBM510091.043Tursiops_truncatus
ENSMUSG00000032580Rbm510099.602ENSUAMG00000028347RBM510098.160Ursus_americanus
ENSMUSG00000032580Rbm510099.602ENSUMAG00000022027RBM510098.160Ursus_maritimus
ENSMUSG00000032580Rbm510098.805ENSVPAG00000009388RBM510097.135Vicugna_pacos
ENSMUSG00000032580Rbm510099.602ENSVVUG00000028647RBM510098.282Vulpes_vulpes
ENSMUSG00000032580Rbm510063.137ENSXMAG00000016369rbm510060.775Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000245spliceosomal complex assembly-ISOProcess
GO:0000381regulation of alternative mRNA splicing, via spliceosome-ISOProcess
GO:0003676nucleic acid binding-IEAFunction
GO:0003723RNA binding-IEAFunction
GO:0003729mRNA binding-ISOFunction
GO:0005634nucleus-ISOComponent
GO:0005654nucleoplasm-ISOComponent
GO:0005681spliceosomal complex-IEAComponent
GO:0006397mRNA processing-IEAProcess
GO:0006915apoptotic process-IEAProcess
GO:0008380RNA splicing-IEAProcess
GO:0042981regulation of apoptotic process-IEAProcess
GO:0043065positive regulation of apoptotic process-ISOProcess
GO:0046872metal ion binding-IEAFunction

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