EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Expression
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSMUSG00000032637 (Gene tree)
Gene ID
233871
Gene Symbol
Atxn2l
Alias
A2D|A2LG|A2RP|A2lp
Full Name
ataxin 2-like
Gene Type
protein_coding
Species
Mus_musculus
Status
confidence
Strand
Minus strand
Length
11730 bases
Position
chr7:126491708-126503437
Accession
2446242
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMUSP00000125881PAM2PF07145.153e-0511
ENSMUSP00000132959PAM2PF07145.153.6e-0511
ENSMUSP00000035415PAM2PF07145.153.8e-0511
ENSMUSP00000146023PAM2PF07145.154e-0511
ENSMUSP00000125881LsmADPF06741.133.2e-1711
ENSMUSP00000132959LsmADPF06741.134.1e-1711
ENSMUSP00000035415LsmADPF06741.134.4e-1711
ENSMUSP00000146023LsmADPF06741.134.8e-1711
ENSMUSP00000137108SM-ATXPF14438.67.2e-2011
ENSMUSP00000132959SM-ATXPF14438.66.9e-1911
ENSMUSP00000035415SM-ATXPF14438.67.4e-1911
ENSMUSP00000146023SM-ATXPF14438.67.9e-1911
ENSMUSP00000125881SM-ATXPF14438.62.5e-1711
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
25993413Label-Free Protein RNA Interactome Analysis Identifies Khsrp Signaling Downstream of the p38/Mk2 Kinase Complex as a Critical Modulator of Cell Cycle ProgressionIC & MEF2015Boucas JDOI: 10.1371/journal.pone.0125745
27281784Identification of RNA binding Proteins in Macrophages by Interactome CaptureIC & RAW264.72016 Jun 8Liepelt ADOI: 10.1074/mcp.M115.056564
27452465The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart DiseaseIC & HL_12016 Jul 21Liao YDOI: 10.1016/j.celrep.2016.06.084
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMUST00000167759-4023XM_006507726ENSMUSP00000132959994 (aa)XP_006507789Q3TGG2
ENSMUST00000206577-3894XM_006507720ENSMUSP000001460231096 (aa)XP_006507783A0A0U1RPL0
ENSMUST00000166682-2745XM_017322209ENSMUSP00000125881863 (aa)XP_017177698E9Q5Q0
ENSMUST00000179818-682-ENSMUSP00000137108218 (aa)-J3QP59
ENSMUST00000206265-503-ENSMUSP00000145768144 (aa)-A0A0U1RNZ9
ENSMUST00000040202-3853XM_006507725ENSMUSP000000354151049 (aa)XP_006507788Q7TQH0
Gene Model
Click here to download ENSMUSG00000032637's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000032637's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMUSG00000032637Atxn2l8055.682ENSMUSG00000042605Atxn28452.841
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMUSG00000032637Atxn2l9995.111ENSG00000168488ATXN2L10098.901Homo_sapiens
ENSMUSG00000032637Atxn2l7768.824ENSAPOG00000021412-9642.665Acanthochromis_polyacanthus
ENSMUSG00000032637Atxn2l7763.277ENSAPOG00000010103atxn2l9841.813Acanthochromis_polyacanthus
ENSMUSG00000032637Atxn2l9993.516ENSAMEG00000015502ATXN2L9690.398Ailuropoda_melanoleuca
ENSMUSG00000032637Atxn2l8559.848ENSACIG00000024435atxn2l9939.837Amphilophus_citrinellus
ENSMUSG00000032637Atxn2l7760.588ENSAOCG00000002581-10040.102Amphiprion_ocellaris
ENSMUSG00000032637Atxn2l7661.932ENSAOCG00000011378atxn2l9741.800Amphiprion_ocellaris
ENSMUSG00000032637Atxn2l7661.932ENSAPEG00000005810atxn2l9741.806Amphiprion_percula
ENSMUSG00000032637Atxn2l7768.824ENSAPEG00000011038-9742.464Amphiprion_percula
ENSMUSG00000032637Atxn2l8361.856ENSATEG00000017689atxn2l9641.563Anabas_testudineus
ENSMUSG00000032637Atxn2l7770.588ENSATEG00000019382-9543.780Anabas_testudineus
ENSMUSG00000032637Atxn2l9975.858ENSACAG00000005425ATXN2L10073.548Anolis_carolinensis
ENSMUSG00000032637Atxn2l9994.780ENSANAG00000026257ATXN2L9894.712Aotus_nancymaae
ENSMUSG00000032637Atxn2l7167.500ENSACLG00000016900atxn2l9539.434Astatotilapia_calliptera
ENSMUSG00000032637Atxn2l7770.588ENSACLG00000009975-9542.803Astatotilapia_calliptera
ENSMUSG00000032637Atxn2l7671.429ENSAMXG00000020362-9543.992Astyanax_mexicanus
ENSMUSG00000032637Atxn2l5945.283ENSAMXG00000003332atxn2l9643.478Astyanax_mexicanus
ENSMUSG00000032637Atxn2l9993.946ENSBTAG00000032087ATXN2L9893.976Bos_taurus
ENSMUSG00000032637Atxn2l9995.111ENSCJAG00000006251ATXN2L9894.254Callithrix_jacchus
ENSMUSG00000032637Atxn2l9993.612ENSCAFG00000017174ATXN2L9893.525Canis_familiaris
ENSMUSG00000032637Atxn2l9993.612ENSCAFG00020017576ATXN2L9892.747Canis_lupus_dingo
ENSMUSG00000032637Atxn2l9993.830ENSCHIG00000009907ATXN2L9893.217Capra_hircus
ENSMUSG00000032637Atxn2l9995.360ENSTSYG00000013854ATXN2L9795.244Carlito_syrichta
ENSMUSG00000032637Atxn2l10093.866ENSCPOG00000010521ATXN2L10094.329Cavia_porcellus
ENSMUSG00000032637Atxn2l9994.838ENSCCAG00000033928ATXN2L10094.485Cebus_capucinus
ENSMUSG00000032637Atxn2l9994.296ENSCATG00000021354ATXN2L9697.935Cercocebus_atys
ENSMUSG00000032637Atxn2l10093.287ENSCLAG00000016117ATXN2L10094.294Chinchilla_lanigera
ENSMUSG00000032637Atxn2l10094.037ENSCSAG00000006306ATXN2L9694.340Chlorocebus_sabaeus
ENSMUSG00000032637Atxn2l9673.460ENSCPBG00000003859ATXN2L8672.393Chrysemys_picta_bellii
ENSMUSG00000032637Atxn2l9991.036ENSCANG00000043625ATXN2L10091.992Colobus_angolensis_palliatus
ENSMUSG00000032637Atxn2l10097.887ENSCGRG00001017114Atxn2l10097.887Cricetulus_griseus_chok1gshd
ENSMUSG00000032637Atxn2l10097.798ENSCGRG00000001500Atxn2l10097.798Cricetulus_griseus_crigri
ENSMUSG00000032637Atxn2l7769.412ENSCVAG00000015825-9742.762Cyprinodon_variegatus
ENSMUSG00000032637Atxn2l7965.934ENSDARG00000011597atxn2l9941.410Danio_rerio
ENSMUSG00000032637Atxn2l9993.830ENSDNOG00000009821ATXN2L8093.175Dasypus_novemcinctus
ENSMUSG00000032637Atxn2l8684.962ENSETEG00000012782ATXN2L8880.025Echinops_telfairi
ENSMUSG00000032637Atxn2l10093.533ENSEASG00005014992ATXN2L9993.858Equus_asinus_asinus
ENSMUSG00000032637Atxn2l9993.364ENSECAG00000007301ATXN2L9892.733Equus_caballus
ENSMUSG00000032637Atxn2l9691.162ENSEEUG00000008940ATXN2L10092.479Erinaceus_europaeus
ENSMUSG00000032637Atxn2l7670.833ENSELUG00000022915-8742.408Esox_lucius
ENSMUSG00000032637Atxn2l8362.500ENSELUG00000023740atxn2l9942.275Esox_lucius
ENSMUSG00000032637Atxn2l9994.535ENSFCAG00000027807ATXN2L9893.883Felis_catus
ENSMUSG00000032637Atxn2l8596.216ENSFDAG00000020667ATXN2L9583.523Fukomys_damarensis
ENSMUSG00000032637Atxn2l5459.585ENSFHEG00000004491-8839.365Fundulus_heteroclitus
ENSMUSG00000032637Atxn2l8863.306ENSGMOG00000006016-9743.719Gadus_morhua
ENSMUSG00000032637Atxn2l7767.059ENSGAFG00000019364-7764.419Gambusia_affinis
ENSMUSG00000032637Atxn2l7669.822ENSGACG00000007446-9642.689Gasterosteus_aculeatus
ENSMUSG00000032637Atxn2l9975.029ENSGAGG00000006078ATXN2L9575.448Gopherus_agassizii
ENSMUSG00000032637Atxn2l10074.104ENSGGOG00000036669-9874.270Gorilla_gorilla
ENSMUSG00000032637Atxn2l9993.852ENSGGOG00000014112ATXN2L9993.776Gorilla_gorilla
ENSMUSG00000032637Atxn2l7770.588ENSHBUG00000007997-8663.889Haplochromis_burtoni
ENSMUSG00000032637Atxn2l8563.636ENSHBUG00000013425atxn2l9840.971Haplochromis_burtoni
ENSMUSG00000032637Atxn2l9992.433ENSHGLG00000010957ATXN2L9893.401Heterocephalus_glaber_female
ENSMUSG00000032637Atxn2l9988.721ENSHGLG00100000705ATXN2L10090.390Heterocephalus_glaber_male
ENSMUSG00000032637Atxn2l7668.263ENSHCOG00000017587-9941.477Hippocampus_comes
ENSMUSG00000032637Atxn2l7966.851ENSIPUG00000001761atxn2l9644.171Ictalurus_punctatus
ENSMUSG00000032637Atxn2l9094.231ENSSTOG00000011807ATXN2L10094.103Ictidomys_tridecemlineatus
ENSMUSG00000032637Atxn2l10094.822ENSJJAG00000005629Atxn2l10094.937Jaculus_jaculus
ENSMUSG00000032637Atxn2l8265.091ENSKMAG00000021450-9943.607Kryptolebias_marmoratus
ENSMUSG00000032637Atxn2l7565.896ENSLBEG00000022720-9542.105Labrus_bergylta
ENSMUSG00000032637Atxn2l7159.538ENSLBEG00000006525atxn2l7849.114Labrus_bergylta
ENSMUSG00000032637Atxn2l8183.616ENSLACG00000006023ATXN2L10061.994Latimeria_chalumnae
ENSMUSG00000032637Atxn2l9993.852ENSLAFG00000018143ATXN2L9993.380Loxodonta_africana
ENSMUSG00000032637Atxn2l9994.412ENSMFAG00000030590ATXN2L9894.074Macaca_fascicularis
ENSMUSG00000032637Atxn2l9994.412ENSMMUG00000003298ATXN2L9894.074Macaca_mulatta
ENSMUSG00000032637Atxn2l10093.578ENSMNEG00000032716ATXN2L9894.074Macaca_nemestrina
ENSMUSG00000032637Atxn2l10093.578ENSMLEG00000034087ATXN2L10095.395Mandrillus_leucophaeus
ENSMUSG00000032637Atxn2l7664.607ENSMAMG00000017977atxn2l9741.683Mastacembelus_armatus
ENSMUSG00000032637Atxn2l7768.824ENSMAMG00000013005-9942.296Mastacembelus_armatus
ENSMUSG00000032637Atxn2l7167.500ENSMZEG00005001258atxn2l9440.151Maylandia_zebra
ENSMUSG00000032637Atxn2l7770.588ENSMZEG00005013869-9542.803Maylandia_zebra
ENSMUSG00000032637Atxn2l10097.354ENSMAUG00000011753Atxn2l10097.354Mesocricetus_auratus
ENSMUSG00000032637Atxn2l9994.200ENSMICG00000010608ATXN2L9794.084Microcebus_murinus
ENSMUSG00000032637Atxn2l10098.089ENSMOCG00000020882Atxn2l10098.089Microtus_ochrogaster
ENSMUSG00000032637Atxn2l7167.089ENSMMOG00000001440-9840.837Mola_mola
ENSMUSG00000032637Atxn2l9987.141ENSMODG00000015570ATXN2L9885.125Monodelphis_domestica
ENSMUSG00000032637Atxn2l10099.195MGP_CAROLIEiJ_G0030450Atxn2l10099.195Mus_caroli
ENSMUSG00000032637Atxn2l10099.296MGP_PahariEiJ_G0013660Atxn2l10099.296Mus_pahari
ENSMUSG00000032637Atxn2l100100.000MGP_SPRETEiJ_G0031564Atxn2l100100.000Mus_spretus
ENSMUSG00000032637Atxn2l9991.512ENSMPUG00000012807ATXN2L10091.729Mustela_putorius_furo
ENSMUSG00000032637Atxn2l9993.597ENSMLUG00000009877ATXN2L9593.191Myotis_lucifugus
ENSMUSG00000032637Atxn2l10096.524ENSNGAG00000021446Atxn2l10096.524Nannospalax_galili
ENSMUSG00000032637Atxn2l7669.048ENSNBRG00000012039-9244.361Neolamprologus_brichardi
ENSMUSG00000032637Atxn2l7165.432ENSNBRG00000020833-9440.283Neolamprologus_brichardi
ENSMUSG00000032637Atxn2l9994.432ENSNLEG00000011004ATXN2L9993.656Nomascus_leucogenys
ENSMUSG00000032637Atxn2l10069.560ENSNLEG00000033414-9668.410Nomascus_leucogenys
ENSMUSG00000032637Atxn2l9984.722ENSMEUG00000011098ATXN2L9682.431Notamacropus_eugenii
ENSMUSG00000032637Atxn2l9988.966ENSOPRG00000002270-10090.891Ochotona_princeps
ENSMUSG00000032637Atxn2l7770.588ENSONIG00000011478-10045.584Oreochromis_niloticus
ENSMUSG00000032637Atxn2l8164.211ENSONIG00000009388atxn2l10042.427Oreochromis_niloticus
ENSMUSG00000032637Atxn2l8196.610ENSOANG00000013115ATXN2L9177.339Ornithorhynchus_anatinus
ENSMUSG00000032637Atxn2l9993.946ENSOCUG00000002677ATXN2L9994.499Oryctolagus_cuniculus
ENSMUSG00000032637Atxn2l7767.836ENSORLG00000006059-9642.336Oryzias_latipes
ENSMUSG00000032637Atxn2l7767.836ENSORLG00020000991-9642.239Oryzias_latipes_hni
ENSMUSG00000032637Atxn2l7767.836ENSORLG00015014174-9642.075Oryzias_latipes_hsok
ENSMUSG00000032637Atxn2l7769.006ENSOMEG00000021118-9641.792Oryzias_melastigma
ENSMUSG00000032637Atxn2l9994.179ENSOGAG00000012596ATXN2L9893.715Otolemur_garnettii
ENSMUSG00000032637Atxn2l9992.907ENSOARG00000002503ATXN2L9993.066Ovis_aries
ENSMUSG00000032637Atxn2l9974.419ENSPPAG00000036236-9873.556Pan_paniscus
ENSMUSG00000032637Atxn2l10094.444ENSPPAG00000039107ATXN2L10094.409Pan_paniscus
ENSMUSG00000032637Atxn2l9994.535ENSPPRG00000013690ATXN2L9893.883Panthera_pardus
ENSMUSG00000032637Atxn2l9994.419ENSPTIG00000015041ATXN2L9494.158Panthera_tigris_altaica
ENSMUSG00000032637Atxn2l9994.412ENSPTRG00000007938ATXN2L9993.776Pan_troglodytes
ENSMUSG00000032637Atxn2l9993.056ENSPANG00000018770ATXN2L9891.967Papio_anubis
ENSMUSG00000032637Atxn2l9466.406ENSPKIG00000018462-7862.454Paramormyrops_kingsleyae
ENSMUSG00000032637Atxn2l8193.220ENSPSIG00000004866ATXN2L10074.421Pelodiscus_sinensis
ENSMUSG00000032637Atxn2l7667.456ENSPMGG00000014821-9454.795Periophthalmus_magnuspinnatus
ENSMUSG00000032637Atxn2l10097.887ENSPEMG00000019231Atxn2l10097.887Peromyscus_maniculatus_bairdii
ENSMUSG00000032637Atxn2l9987.616ENSPCIG00000025207ATXN2L9885.328Phascolarctos_cinereus
ENSMUSG00000032637Atxn2l7767.647ENSPFOG00000005935-8364.419Poecilia_formosa
ENSMUSG00000032637Atxn2l7767.059ENSPLAG00000017094-8463.296Poecilia_latipinna
ENSMUSG00000032637Atxn2l7767.647ENSPMEG00000017227-8464.419Poecilia_mexicana
ENSMUSG00000032637Atxn2l7767.647ENSPREG00000023090-8264.419Poecilia_reticulata
ENSMUSG00000032637Atxn2l9994.296ENSPPYG00000025917ATXN2L9893.495Pongo_abelii
ENSMUSG00000032637Atxn2l9975.349ENSPPYG00000017765-9575.599Pongo_abelii
ENSMUSG00000032637Atxn2l64100.000ENSPCAG00000015179ATXN2L64100.000Procavia_capensis
ENSMUSG00000032637Atxn2l9994.529ENSPCOG00000024791ATXN2L9893.883Propithecus_coquereli
ENSMUSG00000032637Atxn2l9885.993ENSPVAG00000003958ATXN2L9885.993Pteropus_vampyrus
ENSMUSG00000032637Atxn2l7770.588ENSPNYG00000017058-9542.803Pundamilia_nyererei
ENSMUSG00000032637Atxn2l7167.500ENSPNYG00000012482atxn2l9448.268Pundamilia_nyererei
ENSMUSG00000032637Atxn2l7967.403ENSPNAG00000014538atxn2l9945.164Pygocentrus_nattereri
ENSMUSG00000032637Atxn2l7668.862ENSPNAG00000023685-9542.366Pygocentrus_nattereri
ENSMUSG00000032637Atxn2l10097.683ENSRNOG00000018686Atxn2l10096.442Rattus_norvegicus
ENSMUSG00000032637Atxn2l9983.400ENSRBIG00000036712ATXN2L9983.300Rhinopithecus_bieti
ENSMUSG00000032637Atxn2l9994.715ENSRROG00000028547ATXN2L9894.614Rhinopithecus_roxellana
ENSMUSG00000032637Atxn2l9994.529ENSSBOG00000025782ATXN2L10095.542Saimiri_boliviensis_boliviensis
ENSMUSG00000032637Atxn2l9987.616ENSSHAG00000012015ATXN2L9887.842Sarcophilus_harrisii
ENSMUSG00000032637Atxn2l7172.152ENSSFOG00015021588-9744.444Scleropages_formosus
ENSMUSG00000032637Atxn2l7770.930ENSSFOG00015001018atxn2l9841.885Scleropages_formosus
ENSMUSG00000032637Atxn2l8557.500ENSSMAG00000016365atxn2l9741.733Scophthalmus_maximus
ENSMUSG00000032637Atxn2l7770.760ENSSMAG00000016932-9542.683Scophthalmus_maximus
ENSMUSG00000032637Atxn2l8858.095ENSSDUG00000005833atxn2l9841.731Seriola_dumerili
ENSMUSG00000032637Atxn2l9462.454ENSSDUG00000023014-9742.978Seriola_dumerili
ENSMUSG00000032637Atxn2l7167.722ENSSLDG00000017701-8645.187Seriola_lalandi_dorsalis
ENSMUSG00000032637Atxn2l9892.353ENSSARG00000009732ATXN2L10093.492Sorex_araneus
ENSMUSG00000032637Atxn2l8193.750ENSSPUG00000016297ATXN2L9476.735Sphenodon_punctatus
ENSMUSG00000032637Atxn2l7662.570ENSSPAG00000015698atxn2l9542.549Stegastes_partitus
ENSMUSG00000032637Atxn2l7770.000ENSSPAG00000008174-9542.402Stegastes_partitus
ENSMUSG00000032637Atxn2l9993.714ENSSSCG00000021845ATXN2L10093.861Sus_scrofa
ENSMUSG00000032637Atxn2l7768.235ENSTRUG00000007132-9543.726Takifugu_rubripes
ENSMUSG00000032637Atxn2l9163.566ENSTNIG00000018942-9742.655Tetraodon_nigroviridis
ENSMUSG00000032637Atxn2l6895.302ENSTBEG00000014435-6493.262Tupaia_belangeri
ENSMUSG00000032637Atxn2l9890.344ENSTTRG00000005913ATXN2L9890.529Tursiops_truncatus
ENSMUSG00000032637Atxn2l9993.488ENSUAMG00000001462ATXN2L9892.829Ursus_americanus
ENSMUSG00000032637Atxn2l10090.773ENSUMAG00000009437ATXN2L10091.607Ursus_maritimus
ENSMUSG00000032637Atxn2l8198.870ENSVPAG00000009539-6397.537Vicugna_pacos
ENSMUSG00000032637Atxn2l10093.894ENSVVUG00000024239ATXN2L10093.884Vulpes_vulpes
ENSMUSG00000032637Atxn2l9961.060ENSXETG00000014990atxn2l9660.326Xenopus_tropicalis
ENSMUSG00000032637Atxn2l7164.557ENSXCOG00000001128-8062.745Xiphophorus_couchianus
ENSMUSG00000032637Atxn2l7765.896ENSXMAG00000010133-9742.505Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0005634nucleus-IEAComponent
GO:0005737cytoplasm-IEAComponent
GO:0005829cytosol-ISOComponent
GO:0010494cytoplasmic stress granule21873635.IBAComponent
GO:0010494cytoplasmic stress granule-ISOComponent
GO:0010603regulation of cytoplasmic mRNA processing body assembly21873635.IBAProcess
GO:0010603regulation of cytoplasmic mRNA processing body assembly-ISOProcess
GO:0016020membrane-ISOComponent
GO:0016607nuclear speck-ISOComponent
GO:0034063stress granule assembly21873635.IBAProcess
GO:0034063stress granule assembly-ISOProcess

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