EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000032705 (Gene tree)
Gene ID: 97827
Gene Symbol: Exd2
Alias: 4930539P14Rik|Exdl2
Full Name: exonuclease 3'-5' domain containing 2
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Plus strand
Length: 37133 bases
Position: chr12:80463095-80500227
Accession: 1922485
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000043049	DNA_pol_A_exo1	PF01612.20	3.2e-15	1	1
ENSMUSP00000151717	DNA_pol_A_exo1	PF01612.20	2.7e-06	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000219477	-	951	-	-	- (aa)	-	-
ENSMUST00000219757	-	5245	-	-	- (aa)	-	-
ENSMUST00000219272	-	441	-	ENSMUSP00000151717	112 (aa)	-	A0A1W2P7Q1
ENSMUST00000038185	-	3310	XM_006516414	ENSMUSP00000043049	650 (aa)	XP_006516477	Q8VEG4
ENSMUST00000218565	-	777	-	-	- (aa)	-	-
ENSMUST00000219039	-	787	-	ENSMUSP00000151990	20 (aa)	-	A0A1W2P895
ENSMUST00000220239	-	801	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000032705's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000032705's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000032705	Exd2	100	88.393	ENSG00000081177	EXD2	100	88.596	Homo_sapiens
ENSMUSG00000032705	Exd2	100	52.959	ENSAPOG00000004053	exd2	100	52.656	Acanthochromis_polyacanthus
ENSMUSG00000032705	Exd2	100	82.143	ENSAMEG00000014467	EXD2	100	80.000	Ailuropoda_melanoleuca
ENSMUSG00000032705	Exd2	100	51.813	ENSACIG00000012036	exd2	100	50.906	Amphilophus_citrinellus
ENSMUSG00000032705	Exd2	100	53.125	ENSAOCG00000008005	exd2	100	52.782	Amphiprion_ocellaris
ENSMUSG00000032705	Exd2	100	53.383	ENSAPEG00000006784	exd2	100	53.040	Amphiprion_percula
ENSMUSG00000032705	Exd2	100	53.811	ENSATEG00000019834	exd2	86	59.712	Anabas_testudineus
ENSMUSG00000032705	Exd2	100	69.643	ENSAPLG00000003322	EXD2	99	70.654	Anas_platyrhynchos
ENSMUSG00000032705	Exd2	100	63.393	ENSACAG00000005306	EXD2	99	61.598	Anolis_carolinensis
ENSMUSG00000032705	Exd2	100	86.607	ENSANAG00000024026	EXD2	100	81.260	Aotus_nancymaae
ENSMUSG00000032705	Exd2	100	50.452	ENSACLG00000000445	exd2	86	58.018	Astatotilapia_calliptera
ENSMUSG00000032705	Exd2	100	54.464	ENSAMXG00000043700	exd2	100	52.167	Astyanax_mexicanus
ENSMUSG00000032705	Exd2	100	86.607	ENSBTAG00000010052	EXD2	99	82.071	Bos_taurus
ENSMUSG00000032705	Exd2	100	83.929	ENSCJAG00000014987	EXD2	100	81.567	Callithrix_jacchus
ENSMUSG00000032705	Exd2	100	87.500	ENSCAFG00000016557	EXD2	100	80.000	Canis_familiaris
ENSMUSG00000032705	Exd2	100	87.500	ENSCAFG00020005886	EXD2	100	80.000	Canis_lupus_dingo
ENSMUSG00000032705	Exd2	100	85.714	ENSCHIG00000021919	EXD2	99	81.298	Capra_hircus
ENSMUSG00000032705	Exd2	100	84.821	ENSTSYG00000002206	EXD2	100	77.692	Carlito_syrichta
ENSMUSG00000032705	Exd2	100	87.500	ENSCAPG00000011298	EXD2	100	79.231	Cavia_aperea
ENSMUSG00000032705	Exd2	100	87.500	ENSCPOG00000010018	EXD2	100	79.231	Cavia_porcellus
ENSMUSG00000032705	Exd2	100	84.821	ENSCCAG00000032107	EXD2	100	81.260	Cebus_capucinus
ENSMUSG00000032705	Exd2	100	85.714	ENSCATG00000030404	EXD2	100	81.567	Cercocebus_atys
ENSMUSG00000032705	Exd2	100	84.821	ENSCLAG00000005648	EXD2	99	79.844	Chinchilla_lanigera
ENSMUSG00000032705	Exd2	100	86.607	ENSCSAG00000013084	EXD2	100	79.460	Chlorocebus_sabaeus
ENSMUSG00000032705	Exd2	100	73.214	ENSCPBG00000021585	EXD2	100	65.231	Chrysemys_picta_bellii
ENSMUSG00000032705	Exd2	100	46.429	ENSCING00000016481	-	87	43.691	Ciona_intestinalis
ENSMUSG00000032705	Exd2	100	86.607	ENSCANG00000036359	EXD2	100	81.874	Colobus_angolensis_palliatus
ENSMUSG00000032705	Exd2	100	95.536	ENSCGRG00001022081	Exd2	100	92.802	Cricetulus_griseus_chok1gshd
ENSMUSG00000032705	Exd2	100	95.536	ENSCGRG00000010700	Exd2	100	89.077	Cricetulus_griseus_crigri
ENSMUSG00000032705	Exd2	99	53.153	ENSCSEG00000009761	exd2	74	56.373	Cynoglossus_semilaevis
ENSMUSG00000032705	Exd2	99	53.506	ENSCVAG00000016150	exd2	82	58.645	Cyprinodon_variegatus
ENSMUSG00000032705	Exd2	100	51.976	ENSDARG00000016117	exd2	100	51.064	Danio_rerio
ENSMUSG00000032705	Exd2	100	80.531	ENSDNOG00000046970	EXD2	99	79.231	Dasypus_novemcinctus
ENSMUSG00000032705	Exd2	100	85.714	ENSDORG00000015087	Exd2	100	81.385	Dipodomys_ordii
ENSMUSG00000032705	Exd2	98	40.909	FBgn0037901	CG6744	87	39.665	Drosophila_melanogaster
ENSMUSG00000032705	Exd2	100	85.714	ENSETEG00000013803	EXD2	100	83.669	Echinops_telfairi
ENSMUSG00000032705	Exd2	99	40.441	ENSEBUG00000013264	exd2	87	44.466	Eptatretus_burgeri
ENSMUSG00000032705	Exd2	100	86.607	ENSEASG00005016586	EXD2	100	80.769	Equus_asinus_asinus
ENSMUSG00000032705	Exd2	100	86.607	ENSECAG00000019103	EXD2	85	81.094	Equus_caballus
ENSMUSG00000032705	Exd2	100	87.500	ENSEEUG00000007011	EXD2	100	86.895	Erinaceus_europaeus
ENSMUSG00000032705	Exd2	99	54.955	ENSELUG00000022318	exd2	99	52.824	Esox_lucius
ENSMUSG00000032705	Exd2	100	86.607	ENSFCAG00000014350	EXD2	99	80.310	Felis_catus
ENSMUSG00000032705	Exd2	100	66.964	ENSFALG00000005050	EXD2	100	63.692	Ficedula_albicollis
ENSMUSG00000032705	Exd2	100	87.500	ENSFDAG00000009719	EXD2	100	80.000	Fukomys_damarensis
ENSMUSG00000032705	Exd2	100	52.757	ENSFHEG00000010499	exd2	100	52.530	Fundulus_heteroclitus
ENSMUSG00000032705	Exd2	99	53.571	ENSGMOG00000005937	exd2	99	50.218	Gadus_morhua
ENSMUSG00000032705	Exd2	100	67.857	ENSGALG00000009456	EXD2	100	64.000	Gallus_gallus
ENSMUSG00000032705	Exd2	100	50.969	ENSGAFG00000017943	exd2	100	51.506	Gambusia_affinis
ENSMUSG00000032705	Exd2	99	53.153	ENSGACG00000005358	exd2	99	60.156	Gasterosteus_aculeatus
ENSMUSG00000032705	Exd2	100	70.536	ENSGAGG00000023895	EXD2	100	64.154	Gopherus_agassizii
ENSMUSG00000032705	Exd2	100	88.393	ENSGGOG00000001258	EXD2	100	82.642	Gorilla_gorilla
ENSMUSG00000032705	Exd2	100	51.054	ENSHBUG00000019366	exd2	86	58.559	Haplochromis_burtoni
ENSMUSG00000032705	Exd2	100	86.607	ENSHGLG00000008157	EXD2	100	79.692	Heterocephalus_glaber_female
ENSMUSG00000032705	Exd2	100	86.607	ENSHGLG00100003936	EXD2	100	79.538	Heterocephalus_glaber_male
ENSMUSG00000032705	Exd2	100	51.286	ENSHCOG00000018905	exd2	88	56.607	Hippocampus_comes
ENSMUSG00000032705	Exd2	99	55.856	ENSIPUG00000000560	exd2	100	54.148	Ictalurus_punctatus
ENSMUSG00000032705	Exd2	100	86.607	ENSSTOG00000000175	EXD2	100	82.615	Ictidomys_tridecemlineatus
ENSMUSG00000032705	Exd2	100	88.393	ENSJJAG00000021417	-	100	77.996	Jaculus_jaculus
ENSMUSG00000032705	Exd2	100	53.464	ENSKMAG00000016785	exd2	100	53.263	Kryptolebias_marmoratus
ENSMUSG00000032705	Exd2	100	52.410	ENSLBEG00000028400	exd2	86	58.007	Labrus_bergylta
ENSMUSG00000032705	Exd2	96	62.037	ENSLACG00000018609	EXD2	100	54.769	Latimeria_chalumnae
ENSMUSG00000032705	Exd2	100	59.821	ENSLOCG00000013376	exd2	100	55.607	Lepisosteus_oculatus
ENSMUSG00000032705	Exd2	100	84.821	ENSLAFG00000018508	EXD2	100	84.902	Loxodonta_africana
ENSMUSG00000032705	Exd2	100	86.607	ENSMFAG00000041413	EXD2	100	81.413	Macaca_fascicularis
ENSMUSG00000032705	Exd2	100	86.607	ENSMMUG00000020514	EXD2	100	81.260	Macaca_mulatta
ENSMUSG00000032705	Exd2	100	86.607	ENSMNEG00000038561	EXD2	100	81.567	Macaca_nemestrina
ENSMUSG00000032705	Exd2	100	86.607	ENSMLEG00000044130	EXD2	100	81.720	Mandrillus_leucophaeus
ENSMUSG00000032705	Exd2	100	53.323	ENSMAMG00000000136	exd2	86	58.571	Mastacembelus_armatus
ENSMUSG00000032705	Exd2	100	50.374	ENSMZEG00005011274	exd2	86	57.857	Maylandia_zebra
ENSMUSG00000032705	Exd2	100	67.857	ENSMGAG00000011874	EXD2	100	63.231	Meleagris_gallopavo
ENSMUSG00000032705	Exd2	100	71.927	ENSMICG00000009606	EXD2	100	71.775	Microcebus_murinus
ENSMUSG00000032705	Exd2	100	91.071	ENSMOCG00000019497	Exd2	100	88.308	Microtus_ochrogaster
ENSMUSG00000032705	Exd2	100	51.958	ENSMMOG00000000384	exd2	100	51.135	Mola_mola
ENSMUSG00000032705	Exd2	100	68.750	ENSMODG00000010228	EXD2	99	63.217	Monodelphis_domestica
ENSMUSG00000032705	Exd2	100	52.489	ENSMALG00000022371	exd2	100	52.656	Monopterus_albus
ENSMUSG00000032705	Exd2	100	98.214	MGP_PahariEiJ_G0029652	Exd2	100	93.538	Mus_pahari
ENSMUSG00000032705	Exd2	100	99.107	MGP_SPRETEiJ_G0018741	Exd2	100	98.769	Mus_spretus
ENSMUSG00000032705	Exd2	100	86.607	ENSMPUG00000007368	EXD2	100	80.154	Mustela_putorius_furo
ENSMUSG00000032705	Exd2	100	83.929	ENSMLUG00000011848	EXD2	100	87.059	Myotis_lucifugus
ENSMUSG00000032705	Exd2	100	51.579	ENSNBRG00000004615	exd2	100	50.827	Neolamprologus_brichardi
ENSMUSG00000032705	Exd2	100	87.500	ENSNLEG00000001275	EXD2	100	82.488	Nomascus_leucogenys
ENSMUSG00000032705	Exd2	100	86.607	ENSOPRG00000000078	EXD2	100	86.492	Ochotona_princeps
ENSMUSG00000032705	Exd2	100	83.036	ENSODEG00000014245	EXD2	100	79.231	Octodon_degus
ENSMUSG00000032705	Exd2	100	50.374	ENSONIG00000000385	exd2	100	50.376	Oreochromis_niloticus
ENSMUSG00000032705	Exd2	99	73.874	ENSOANG00000012621	EXD2	100	60.700	Ornithorhynchus_anatinus
ENSMUSG00000032705	Exd2	100	85.714	ENSOCUG00000006626	EXD2	100	81.538	Oryctolagus_cuniculus
ENSMUSG00000032705	Exd2	100	52.200	ENSORLG00000019790	exd2	88	57.624	Oryzias_latipes
ENSMUSG00000032705	Exd2	99	53.153	ENSORLG00020004434	exd2	100	51.750	Oryzias_latipes_hni
ENSMUSG00000032705	Exd2	100	51.897	ENSORLG00015001003	exd2	100	51.598	Oryzias_latipes_hsok
ENSMUSG00000032705	Exd2	100	52.439	ENSOMEG00000023552	exd2	100	51.988	Oryzias_melastigma
ENSMUSG00000032705	Exd2	100	85.714	ENSOGAG00000012059	EXD2	99	79.385	Otolemur_garnettii
ENSMUSG00000032705	Exd2	100	86.607	ENSOARG00000021181	EXD2	99	81.607	Ovis_aries
ENSMUSG00000032705	Exd2	100	89.286	ENSPPAG00000042293	EXD2	100	82.949	Pan_paniscus
ENSMUSG00000032705	Exd2	100	85.714	ENSPPRG00000002946	EXD2	99	80.155	Panthera_pardus
ENSMUSG00000032705	Exd2	100	85.714	ENSPTIG00000018876	EXD2	99	80.155	Panthera_tigris_altaica
ENSMUSG00000032705	Exd2	100	88.393	ENSPTRG00000006480	EXD2	100	87.903	Pan_troglodytes
ENSMUSG00000032705	Exd2	100	86.607	ENSPANG00000025013	EXD2	100	81.720	Papio_anubis
ENSMUSG00000032705	Exd2	99	56.757	ENSPKIG00000007907	exd2	99	52.329	Paramormyrops_kingsleyae
ENSMUSG00000032705	Exd2	100	70.536	ENSPSIG00000010111	EXD2	100	61.846	Pelodiscus_sinensis
ENSMUSG00000032705	Exd2	100	52.648	ENSPMGG00000021023	exd2	88	58.393	Periophthalmus_magnuspinnatus
ENSMUSG00000032705	Exd2	100	75.893	ENSPCIG00000012390	-	100	71.242	Phascolarctos_cinereus
ENSMUSG00000032705	Exd2	100	52.287	ENSPFOG00000004789	exd2	100	51.524	Poecilia_formosa
ENSMUSG00000032705	Exd2	100	52.439	ENSPLAG00000020798	exd2	100	51.677	Poecilia_latipinna
ENSMUSG00000032705	Exd2	100	51.891	ENSPMEG00000006063	exd2	100	50.983	Poecilia_mexicana
ENSMUSG00000032705	Exd2	100	51.940	ENSPREG00000008479	exd2	100	51.205	Poecilia_reticulata
ENSMUSG00000032705	Exd2	100	88.393	ENSPPYG00000005937	EXD2	100	82.181	Pongo_abelii
ENSMUSG00000032705	Exd2	100	87.500	ENSPCAG00000007242	EXD2	100	85.484	Procavia_capensis
ENSMUSG00000032705	Exd2	100	86.607	ENSPCOG00000028702	EXD2	99	81.720	Propithecus_coquereli
ENSMUSG00000032705	Exd2	100	85.714	ENSPVAG00000016901	EXD2	100	86.694	Pteropus_vampyrus
ENSMUSG00000032705	Exd2	100	51.054	ENSPNYG00000010343	exd2	86	58.739	Pundamilia_nyererei
ENSMUSG00000032705	Exd2	100	53.571	ENSPNAG00000009476	exd2	100	52.345	Pygocentrus_nattereri
ENSMUSG00000032705	Exd2	100	95.536	ENSRNOG00000027707	Exd2	100	92.923	Rattus_norvegicus
ENSMUSG00000032705	Exd2	100	86.607	ENSRBIG00000031108	EXD2	100	81.720	Rhinopithecus_bieti
ENSMUSG00000032705	Exd2	100	86.607	ENSRROG00000033249	EXD2	100	81.720	Rhinopithecus_roxellana
ENSMUSG00000032705	Exd2	100	86.607	ENSSBOG00000035171	EXD2	100	82.181	Saimiri_boliviensis_boliviensis
ENSMUSG00000032705	Exd2	100	77.679	ENSSHAG00000005008	EXD2	100	65.745	Sarcophilus_harrisii
ENSMUSG00000032705	Exd2	99	57.658	ENSSFOG00015006470	exd2	100	53.997	Scleropages_formosus
ENSMUSG00000032705	Exd2	99	54.054	ENSSMAG00000009321	exd2	100	49.088	Scophthalmus_maximus
ENSMUSG00000032705	Exd2	100	53.506	ENSSDUG00000001321	exd2	100	53.425	Seriola_dumerili
ENSMUSG00000032705	Exd2	100	54.421	ENSSLDG00000011348	exd2	100	53.333	Seriola_lalandi_dorsalis
ENSMUSG00000032705	Exd2	100	84.821	ENSSARG00000012747	EXD2	87	84.677	Sorex_araneus
ENSMUSG00000032705	Exd2	99	68.468	ENSSPUG00000002120	EXD2	100	69.608	Sphenodon_punctatus
ENSMUSG00000032705	Exd2	99	54.955	ENSSPAG00000002512	exd2	100	53.323	Stegastes_partitus
ENSMUSG00000032705	Exd2	100	87.500	ENSSSCG00000002305	EXD2	95	85.882	Sus_scrofa
ENSMUSG00000032705	Exd2	100	70.536	ENSTGUG00000011469	EXD2	100	64.308	Taeniopygia_guttata
ENSMUSG00000032705	Exd2	100	53.354	ENSTRUG00000003672	exd2	100	52.432	Takifugu_rubripes
ENSMUSG00000032705	Exd2	99	49.550	ENSTNIG00000003046	exd2	100	57.143	Tetraodon_nigroviridis
ENSMUSG00000032705	Exd2	100	86.607	ENSTTRG00000013954	EXD2	100	87.903	Tursiops_truncatus
ENSMUSG00000032705	Exd2	100	85.714	ENSUAMG00000010774	EXD2	100	81.077	Ursus_americanus
ENSMUSG00000032705	Exd2	100	85.714	ENSUMAG00000010083	EXD2	99	81.048	Ursus_maritimus
ENSMUSG00000032705	Exd2	65	88.679	ENSVPAG00000005658	EXD2	100	88.679	Vicugna_pacos
ENSMUSG00000032705	Exd2	100	87.500	ENSVVUG00000003704	EXD2	99	79.846	Vulpes_vulpes
ENSMUSG00000032705	Exd2	100	66.964	ENSXETG00000017930	exd2	87	66.849	Xenopus_tropicalis
ENSMUSG00000032705	Exd2	99	50.450	ENSXCOG00000014338	exd2	63	55.236	Xiphophorus_couchianus
ENSMUSG00000032705	Exd2	100	53.182	ENSXMAG00000003565	exd2	100	52.439	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000724	double-strand break repair via homologous recombination	-	ISO	Process
GO:0000729	DNA double-strand break processing	-	ISO	Process
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0004518	nuclease activity	-	IEA	Function
GO:0004527	exonuclease activity	-	IEA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0006139	nucleobase-containing compound metabolic process	-	IEA	Process
GO:0006302	double-strand break repair	-	ISO	Process
GO:0008310	single-stranded DNA 3'-5' exodeoxyribonuclease activity	-	ISO	Function
GO:0008408	3'-5' exonuclease activity	21873635.	IBA	Function
GO:0008408	3'-5' exonuclease activity	-	ISO	Function
GO:0008852	exodeoxyribonuclease I activity	-	IEA	Function
GO:0016787	hydrolase activity	-	IEA	Function
GO:0090305	nucleic acid phosphodiester bond hydrolysis	-	ISO	Process