EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000032803 (Gene tree)
Gene ID: 321022
Gene Symbol: Cdv3
Alias: 2510010F10Rik|C230084J24Rik|TPP36
Full Name: carnitine deficiency-associated gene expressed in ventricle 3
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 12747
Position: chr9: 103353094-103365840
Accession: 2448759
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000072249	-	3787	-	ENSMUSP00000072101	236 (aa)	-	Q4VAA2
ENSMUST00000116517	-	3741	-	ENSMUSP00000112216	109 (aa)	-	F8WGL9
ENSMUST00000190226	-	3107	XM_006511758	ENSMUSP00000140900	154 (aa)	XP_006511821	A0A087WS49
ENSMUST00000035484	-	3387	XM_006511756	ENSMUSP00000044420	281 (aa)	XP_006511819	Q4VAA2
ENSMUST00000189875	-	554	-	ENSMUSP00000140690	154 (aa)	-	A0A087WRM0
ENSMUST00000189896	-	1023	-	ENSMUSP00000139440	235 (aa)	-	A0A087WNP6
ENSMUST00000190127	-	3377	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000032803's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000032803's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000032803	Cdv3	100	92.793	ENSG00000091527	CDV3	100	92.391	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003674	molecular_function	-	ND	Function
GO:0005634	nucleus	12606058.	IDA	Component
GO:0005737	cytoplasm	12606058.	IDA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0005886	plasma membrane	-	ISO	Component
GO:0008150	biological_process	-	ND	Process