EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000032834 (Gene tree)
Gene ID: 110816
Gene Symbol: Pwp2
Alias: 6530411D08Rik|Pwp2|Pwp2h
Full Name: PWP2 periodic tryptophan protein homolog (yeast)
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Minus strand
Length: 14241 bases
Position: chr10:78170909-78185149
Accession: 1341200
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000045812	Utp12	PF04003.12	4.4e-22	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
25993413	Label-Free Protein RNA Interactome Analysis Identifies Khsrp Signaling Downstream of the p38/Mk2 Kinase Complex as a Critical Modulator of Cell Cycle Progression	IC & MEF	2015	Boucas J	DOI: 10.1371/journal.pone.0125745
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000042556	-	3872	-	ENSMUSP00000045812	919 (aa)	-	Q8BU03

Gene Model

Click here to download ENSMUSG00000032834's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000032834's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000032834	Pwp2	99	89.434	ENSG00000241945	PWP2	99	89.434	Homo_sapiens
ENSMUSG00000032834	Pwp2	96	71.783	ENSAPOG00000021522	pwp2h	99	70.796	Acanthochromis_polyacanthus
ENSMUSG00000032834	Pwp2	98	86.394	ENSAMEG00000010907	-	99	86.394	Ailuropoda_melanoleuca
ENSMUSG00000032834	Pwp2	96	72.584	ENSACIG00000024109	pwp2h	98	71.460	Amphilophus_citrinellus
ENSMUSG00000032834	Pwp2	96	71.783	ENSAOCG00000014853	pwp2h	99	70.989	Amphiprion_ocellaris
ENSMUSG00000032834	Pwp2	96	71.558	ENSAPEG00000008152	pwp2h	99	71.096	Amphiprion_percula
ENSMUSG00000032834	Pwp2	96	72.153	ENSATEG00000015493	pwp2h	100	72.538	Anabas_testudineus
ENSMUSG00000032834	Pwp2	96	76.497	ENSAPLG00000010371	-	98	75.250	Anas_platyrhynchos
ENSMUSG00000032834	Pwp2	98	74.311	ENSACAG00000017861	-	99	74.311	Anolis_carolinensis
ENSMUSG00000032834	Pwp2	99	88.671	ENSANAG00000034845	-	99	88.671	Aotus_nancymaae
ENSMUSG00000032834	Pwp2	96	72.103	ENSACLG00000011425	pwp2h	100	70.531	Astatotilapia_calliptera
ENSMUSG00000032834	Pwp2	97	68.525	ENSAMXG00000007988	pwp2h	97	68.427	Astyanax_mexicanus
ENSMUSG00000032834	Pwp2	99	88.889	ENSBTAG00000007105	-	99	88.889	Bos_taurus
ENSMUSG00000032834	Pwp2	96	38.239	WBGene00018891	F55F8.3	97	37.758	Caenorhabditis_elegans
ENSMUSG00000032834	Pwp2	99	88.139	ENSCJAG00000005570	-	99	87.813	Callithrix_jacchus
ENSMUSG00000032834	Pwp2	98	87.058	ENSCAFG00000010687	-	99	86.976	Canis_familiaris
ENSMUSG00000032834	Pwp2	82	85.867	ENSCAFG00020019199	-	89	85.771	Canis_lupus_dingo
ENSMUSG00000032834	Pwp2	97	85.554	ENSCHIG00000026362	-	99	84.995	Capra_hircus
ENSMUSG00000032834	Pwp2	100	88.466	ENSTSYG00000009022	-	98	89.294	Carlito_syrichta
ENSMUSG00000032834	Pwp2	99	89.583	ENSCAPG00000017934	-	100	88.889	Cavia_aperea
ENSMUSG00000032834	Pwp2	99	89.069	ENSCPOG00000023616	-	99	88.853	Cavia_porcellus
ENSMUSG00000032834	Pwp2	99	88.683	ENSCCAG00000034616	-	99	88.357	Cebus_capucinus
ENSMUSG00000032834	Pwp2	99	89.760	ENSCATG00000032550	-	99	89.760	Cercocebus_atys
ENSMUSG00000032834	Pwp2	99	89.651	ENSCLAG00000009503	-	99	89.989	Chinchilla_lanigera
ENSMUSG00000032834	Pwp2	99	89.542	ENSCSAG00000007903	-	99	89.542	Chlorocebus_sabaeus
ENSMUSG00000032834	Pwp2	96	77.941	ENSCPBG00000018335	-	99	76.744	Chrysemys_picta_bellii
ENSMUSG00000032834	Pwp2	97	56.076	ENSCSAVG00000004186	-	99	56.076	Ciona_savignyi
ENSMUSG00000032834	Pwp2	99	89.869	ENSCANG00000028013	-	99	89.542	Colobus_angolensis_palliatus
ENSMUSG00000032834	Pwp2	100	95.459	ENSCGRG00001020074	Pwp2	100	95.459	Cricetulus_griseus_chok1gshd
ENSMUSG00000032834	Pwp2	100	95.459	ENSCGRG00000003750	Pwp2	100	95.459	Cricetulus_griseus_crigri
ENSMUSG00000032834	Pwp2	96	72.172	ENSCSEG00000000861	pwp2h	98	71.763	Cynoglossus_semilaevis
ENSMUSG00000032834	Pwp2	96	71.977	ENSCVAG00000000996	pwp2h	100	70.879	Cyprinodon_variegatus
ENSMUSG00000032834	Pwp2	99	66.272	ENSDARG00000037109	pwp2h	97	66.557	Danio_rerio
ENSMUSG00000032834	Pwp2	86	86.185	ENSDNOG00000012128	-	99	86.185	Dasypus_novemcinctus
ENSMUSG00000032834	Pwp2	95	86.743	ENSDORG00000003015	Pwp2	95	86.743	Dipodomys_ordii
ENSMUSG00000032834	Pwp2	99	46.858	FBgn0033557	CG12325	97	47.397	Drosophila_melanogaster
ENSMUSG00000032834	Pwp2	85	63.462	ENSEBUG00000003140	pwp2h	96	62.594	Eptatretus_burgeri
ENSMUSG00000032834	Pwp2	98	89.433	ENSEASG00005001651	-	98	89.157	Equus_asinus_asinus
ENSMUSG00000032834	Pwp2	98	89.655	ENSECAG00000006090	-	98	89.266	Equus_caballus
ENSMUSG00000032834	Pwp2	100	69.772	ENSELUG00000001878	pwp2h	99	70.452	Esox_lucius
ENSMUSG00000032834	Pwp2	97	87.627	ENSFCAG00000004487	-	99	86.880	Felis_catus
ENSMUSG00000032834	Pwp2	99	74.232	ENSFALG00000012300	-	99	74.367	Ficedula_albicollis
ENSMUSG00000032834	Pwp2	98	90.000	ENSFDAG00000016140	-	99	89.778	Fukomys_damarensis
ENSMUSG00000032834	Pwp2	94	72.190	ENSFHEG00000009078	pwp2h	100	72.190	Fundulus_heteroclitus
ENSMUSG00000032834	Pwp2	96	70.535	ENSGMOG00000016522	pwp2h	98	69.556	Gadus_morhua
ENSMUSG00000032834	Pwp2	98	75.748	ENSGALG00000045726	-	99	75.748	Gallus_gallus
ENSMUSG00000032834	Pwp2	99	71.041	ENSGAFG00000011340	pwp2h	98	72.204	Gambusia_affinis
ENSMUSG00000032834	Pwp2	96	70.621	ENSGACG00000014928	pwp2h	99	69.654	Gasterosteus_aculeatus
ENSMUSG00000032834	Pwp2	98	77.409	ENSGAGG00000005377	-	99	77.076	Gopherus_agassizii
ENSMUSG00000032834	Pwp2	99	88.792	ENSGGOG00000041875	-	99	89.119	Gorilla_gorilla
ENSMUSG00000032834	Pwp2	96	72.328	ENSHBUG00000005530	pwp2h	100	70.748	Haplochromis_burtoni
ENSMUSG00000032834	Pwp2	99	88.235	ENSHGLG00000017401	-	99	88.235	Heterocephalus_glaber_female
ENSMUSG00000032834	Pwp2	99	87.555	ENSHGLG00100013888	-	99	87.555	Heterocephalus_glaber_male
ENSMUSG00000032834	Pwp2	99	67.756	ENSHCOG00000018121	pwp2h	97	68.584	Hippocampus_comes
ENSMUSG00000032834	Pwp2	100	67.273	ENSIPUG00000014074	pwp2h	98	67.978	Ictalurus_punctatus
ENSMUSG00000032834	Pwp2	99	90.132	ENSSTOG00000014194	-	99	90.220	Ictidomys_tridecemlineatus
ENSMUSG00000032834	Pwp2	99	92.266	ENSJJAG00000013039	Pwp2	99	93.069	Jaculus_jaculus
ENSMUSG00000032834	Pwp2	96	71.638	ENSKMAG00000003143	pwp2h	99	70.986	Kryptolebias_marmoratus
ENSMUSG00000032834	Pwp2	96	71.186	ENSLBEG00000006388	pwp2h	98	70.510	Labrus_bergylta
ENSMUSG00000032834	Pwp2	93	72.125	ENSLACG00000006084	pwp2h	98	71.842	Latimeria_chalumnae
ENSMUSG00000032834	Pwp2	97	71.253	ENSLOCG00000003663	pwp2h	97	70.457	Lepisosteus_oculatus
ENSMUSG00000032834	Pwp2	94	88.051	ENSLAFG00000003871	-	100	87.935	Loxodonta_africana
ENSMUSG00000032834	Pwp2	99	89.542	ENSMFAG00000044448	-	99	89.542	Macaca_fascicularis
ENSMUSG00000032834	Pwp2	99	89.542	ENSMMUG00000005271	PWP2	99	89.542	Macaca_mulatta
ENSMUSG00000032834	Pwp2	99	89.542	ENSMNEG00000030782	-	99	89.542	Macaca_nemestrina
ENSMUSG00000032834	Pwp2	99	89.542	ENSMLEG00000039860	-	99	89.542	Mandrillus_leucophaeus
ENSMUSG00000032834	Pwp2	96	72.090	ENSMAMG00000022327	pwp2h	98	71.350	Mastacembelus_armatus
ENSMUSG00000032834	Pwp2	96	71.991	ENSMZEG00005015448	pwp2h	98	71.302	Maylandia_zebra
ENSMUSG00000032834	Pwp2	99	67.943	ENSMGAG00000014596	-	99	67.943	Meleagris_gallopavo
ENSMUSG00000032834	Pwp2	92	57.009	ENSMAUG00000020265	Pwp2	92	70.773	Mesocricetus_auratus
ENSMUSG00000032834	Pwp2	99	88.792	ENSMICG00000001002	-	99	89.109	Microcebus_murinus
ENSMUSG00000032834	Pwp2	100	94.245	ENSMOCG00000003844	Pwp2	99	94.846	Microtus_ochrogaster
ENSMUSG00000032834	Pwp2	95	69.467	ENSMMOG00000000882	pwp2h	100	69.467	Mola_mola
ENSMUSG00000032834	Pwp2	99	82.359	ENSMODG00000021081	-	99	82.359	Monodelphis_domestica
ENSMUSG00000032834	Pwp2	99	70.915	ENSMALG00000000821	pwp2h	98	71.906	Monopterus_albus
ENSMUSG00000032834	Pwp2	100	99.674	MGP_CAROLIEiJ_G0015505	Pwp2	100	99.674	Mus_caroli
ENSMUSG00000032834	Pwp2	100	98.477	MGP_PahariEiJ_G0030918	Pwp2	100	98.477	Mus_pahari
ENSMUSG00000032834	Pwp2	100	99.565	MGP_SPRETEiJ_G0016318	Pwp2	100	99.565	Mus_spretus
ENSMUSG00000032834	Pwp2	86	85.242	ENSMPUG00000009936	-	98	85.115	Mustela_putorius_furo
ENSMUSG00000032834	Pwp2	98	83.832	ENSMLUG00000004823	-	98	83.682	Myotis_lucifugus
ENSMUSG00000032834	Pwp2	99	93.457	ENSNGAG00000021106	Pwp2	99	93.516	Nannospalax_galili
ENSMUSG00000032834	Pwp2	99	69.765	ENSNBRG00000016527	pwp2h	100	69.829	Neolamprologus_brichardi
ENSMUSG00000032834	Pwp2	97	89.977	ENSNLEG00000001928	-	100	89.977	Nomascus_leucogenys
ENSMUSG00000032834	Pwp2	99	90.220	ENSODEG00000013073	-	99	90.408	Octodon_degus
ENSMUSG00000032834	Pwp2	96	71.991	ENSONIG00000007136	pwp2h	100	70.423	Oreochromis_niloticus
ENSMUSG00000032834	Pwp2	96	78.716	ENSOANG00000006477	-	99	76.990	Ornithorhynchus_anatinus
ENSMUSG00000032834	Pwp2	98	70.653	ENSORLG00000000066	pwp2h	99	70.764	Oryzias_latipes
ENSMUSG00000032834	Pwp2	98	70.875	ENSORLG00020000321	pwp2h	99	70.986	Oryzias_latipes_hni
ENSMUSG00000032834	Pwp2	98	66.999	ENSORLG00015014731	pwp2h	99	66.888	Oryzias_latipes_hsok
ENSMUSG00000032834	Pwp2	97	55.866	ENSOMEG00000020671	pwp2h	99	76.768	Oryzias_melastigma
ENSMUSG00000032834	Pwp2	99	89.474	ENSOGAG00000012473	-	99	89.121	Otolemur_garnettii
ENSMUSG00000032834	Pwp2	97	87.318	ENSOARG00000011672	-	98	88.452	Ovis_aries
ENSMUSG00000032834	Pwp2	99	89.434	ENSPPAG00000037874	-	99	89.434	Pan_paniscus
ENSMUSG00000032834	Pwp2	97	87.852	ENSPPRG00000011088	-	99	87.211	Panthera_pardus
ENSMUSG00000032834	Pwp2	99	78.020	ENSPTIG00000020872	-	98	79.029	Panthera_tigris_altaica
ENSMUSG00000032834	Pwp2	99	89.542	ENSPTRG00000013969	-	99	89.542	Pan_troglodytes
ENSMUSG00000032834	Pwp2	99	89.542	ENSPANG00000006267	-	99	89.542	Papio_anubis
ENSMUSG00000032834	Pwp2	99	68.804	ENSPKIG00000002693	pwp2h	100	72.912	Paramormyrops_kingsleyae
ENSMUSG00000032834	Pwp2	96	77.036	ENSPSIG00000009783	-	99	76.117	Pelodiscus_sinensis
ENSMUSG00000032834	Pwp2	96	71.847	ENSPMGG00000022349	pwp2h	100	70.217	Periophthalmus_magnuspinnatus
ENSMUSG00000032834	Pwp2	99	94.956	ENSPEMG00000009968	Pwp2	99	94.846	Peromyscus_maniculatus_bairdii
ENSMUSG00000032834	Pwp2	99	81.243	ENSPCIG00000014548	-	99	81.588	Phascolarctos_cinereus
ENSMUSG00000032834	Pwp2	97	71.749	ENSPFOG00000014764	pwp2h	100	70.992	Poecilia_formosa
ENSMUSG00000032834	Pwp2	97	71.637	ENSPLAG00000011559	pwp2h	100	70.883	Poecilia_latipinna
ENSMUSG00000032834	Pwp2	97	71.973	ENSPMEG00000021347	pwp2h	100	71.210	Poecilia_mexicana
ENSMUSG00000032834	Pwp2	97	71.700	ENSPREG00000015887	pwp2h	100	71.273	Poecilia_reticulata
ENSMUSG00000032834	Pwp2	99	89.434	ENSPPYG00000011478	-	99	88.889	Pongo_abelii
ENSMUSG00000032834	Pwp2	99	82.295	ENSPCAG00000004676	-	99	82.108	Procavia_capensis
ENSMUSG00000032834	Pwp2	99	88.671	ENSPCOG00000012856	-	99	89.329	Propithecus_coquereli
ENSMUSG00000032834	Pwp2	99	80.418	ENSPVAG00000002312	-	99	80.638	Pteropus_vampyrus
ENSMUSG00000032834	Pwp2	74	70.015	ENSPNYG00000008379	pwp2h	99	68.100	Pundamilia_nyererei
ENSMUSG00000032834	Pwp2	96	68.923	ENSPNAG00000017876	pwp2h	98	67.978	Pygocentrus_nattereri
ENSMUSG00000032834	Pwp2	100	96.634	ENSRNOG00000001210	Pwp2	100	96.634	Rattus_norvegicus
ENSMUSG00000032834	Pwp2	99	89.325	ENSRBIG00000034365	-	99	88.780	Rhinopithecus_bieti
ENSMUSG00000032834	Pwp2	99	89.434	ENSRROG00000031946	-	99	88.889	Rhinopithecus_roxellana
ENSMUSG00000032834	Pwp2	95	44.470	YCR057C	PWP2	96	43.634	Saccharomyces_cerevisiae
ENSMUSG00000032834	Pwp2	99	88.306	ENSSBOG00000034554	-	99	87.978	Saimiri_boliviensis_boliviensis
ENSMUSG00000032834	Pwp2	99	69.913	ENSSFOG00015003316	pwp2	99	70.338	Scleropages_formosus
ENSMUSG00000032834	Pwp2	96	72.624	ENSSMAG00000011839	pwp2h	98	70.893	Scophthalmus_maximus
ENSMUSG00000032834	Pwp2	96	72.624	ENSSDUG00000011462	pwp2h	98	71.809	Seriola_dumerili
ENSMUSG00000032834	Pwp2	96	72.738	ENSSLDG00000008651	pwp2h	97	71.698	Seriola_lalandi_dorsalis
ENSMUSG00000032834	Pwp2	98	76.863	ENSSPUG00000002980	-	100	76.752	Sphenodon_punctatus
ENSMUSG00000032834	Pwp2	96	71.654	ENSSPAG00000023368	pwp2h	99	71.099	Stegastes_partitus
ENSMUSG00000032834	Pwp2	99	85.291	ENSSSCG00000029627	-	99	85.840	Sus_scrofa
ENSMUSG00000032834	Pwp2	96	75.000	ENSTGUG00000005996	-	100	74.887	Taeniopygia_guttata
ENSMUSG00000032834	Pwp2	61	70.714	ENSTGUG00000018216	-	100	70.714	Taeniopygia_guttata
ENSMUSG00000032834	Pwp2	98	69.724	ENSTRUG00000013258	pwp2h	99	69.392	Takifugu_rubripes
ENSMUSG00000032834	Pwp2	98	68.729	ENSTNIG00000010613	pwp2h	99	68.398	Tetraodon_nigroviridis
ENSMUSG00000032834	Pwp2	82	91.871	ENSTBEG00000015597	-	88	91.682	Tupaia_belangeri
ENSMUSG00000032834	Pwp2	94	87.340	ENSTTRG00000006728	-	100	87.224	Tursiops_truncatus
ENSMUSG00000032834	Pwp2	99	87.239	ENSUAMG00000019031	-	99	87.239	Ursus_americanus
ENSMUSG00000032834	Pwp2	98	84.513	ENSUMAG00000025481	-	98	84.513	Ursus_maritimus
ENSMUSG00000032834	Pwp2	98	87.222	ENSVVUG00000024125	-	99	86.093	Vulpes_vulpes
ENSMUSG00000032834	Pwp2	77	57.647	ENSXETG00000018002	pwp2	88	57.647	Xenopus_tropicalis
ENSMUSG00000032834	Pwp2	96	68.095	ENSXCOG00000020474	pwp2h	100	67.065	Xiphophorus_couchianus
ENSMUSG00000032834	Pwp2	99	71.116	ENSXMAG00000008124	pwp2h	100	71.055	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000028	ribosomal small subunit assembly	21873635.	IBA	Process
GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	21873635.	IBA	Process
GO:0005634	nucleus	-	IEA	Component
GO:0032040	small-subunit processome	21873635.	IBA	Component
GO:0034388	Pwp2p-containing subcomplex of 90S preribosome	21873635.	IBA	Component