EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000032940 (Gene tree)
Gene ID: 224344
Gene Symbol: Rbm11
Alias: -
Full Name: RNA binding motif protein 11
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 9986 bases
Position: chr16:75592844-75602829
Accession: 2447622
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000109887	RRM_1	PF00076.22	1.2e-14	1	1
ENSMUSP00000038956	RRM_1	PF00076.22	1.2e-14	1	1
ENSMUSP00000109891	RRM_1	PF00076.22	1.2e-14	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000114253	-	2699	-	ENSMUSP00000109891	238 (aa)	-	Q80YT9
ENSMUST00000114249	-	2750	-	ENSMUSP00000109887	238 (aa)	-	H9KUZ7
ENSMUST00000046378	-	1400	-	ENSMUSP00000038956	238 (aa)	-	Q80YT9

Gene Model

Click here to download ENSMUSG00000032940's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000032940's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000032940	Rbm11	95	67.778	ENSG00000185272	RBM11	96	67.037	Homo_sapiens
ENSMUSG00000032940	Rbm11	95	78.723	ENSAMEG00000014371	RBM11	96	78.723	Ailuropoda_melanoleuca
ENSMUSG00000032940	Rbm11	63	45.395	ENSAPEG00000021981	rbm7	62	43.210	Amphiprion_percula
ENSMUSG00000032940	Rbm11	95	78.855	ENSANAG00000034350	RBM11	95	78.855	Aotus_nancymaae
ENSMUSG00000032940	Rbm11	61	44.595	ENSACLG00000001203	rbm7	56	44.595	Astatotilapia_calliptera
ENSMUSG00000032940	Rbm11	99	74.286	ENSBTAG00000034347	RBM11	67	75.107	Bos_taurus
ENSMUSG00000032940	Rbm11	95	78.414	ENSCJAG00000003218	RBM11	95	78.414	Callithrix_jacchus
ENSMUSG00000032940	Rbm11	95	80.176	ENSCAFG00000030228	RBM11	95	80.176	Canis_familiaris
ENSMUSG00000032940	Rbm11	95	80.176	ENSCAFG00020026541	RBM11	95	80.176	Canis_lupus_dingo
ENSMUSG00000032940	Rbm11	99	73.469	ENSCHIG00000019134	RBM11	96	74.043	Capra_hircus
ENSMUSG00000032940	Rbm11	95	79.295	ENSTSYG00000003871	RBM11	95	79.295	Carlito_syrichta
ENSMUSG00000032940	Rbm11	82	69.231	ENSCAPG00000013590	RBM11	94	69.231	Cavia_aperea
ENSMUSG00000032940	Rbm11	95	71.806	ENSCPOG00000005309	RBM11	95	71.806	Cavia_porcellus
ENSMUSG00000032940	Rbm11	95	78.855	ENSCCAG00000030608	RBM11	95	78.855	Cebus_capucinus
ENSMUSG00000032940	Rbm11	95	66.667	ENSCATG00000043433	RBM11	96	66.667	Cercocebus_atys
ENSMUSG00000032940	Rbm11	95	80.617	ENSCLAG00000005374	RBM11	95	80.617	Chinchilla_lanigera
ENSMUSG00000032940	Rbm11	89	75.943	ENSCHOG00000007826	RBM11	98	76.442	Choloepus_hoffmanni
ENSMUSG00000032940	Rbm11	90	55.895	ENSCPBG00000028340	RBM11	92	55.172	Chrysemys_picta_bellii
ENSMUSG00000032940	Rbm11	80	73.575	ENSCANG00000027287	-	95	73.575	Colobus_angolensis_palliatus
ENSMUSG00000032940	Rbm11	95	65.926	ENSCANG00000017645	RBM11	96	65.926	Colobus_angolensis_palliatus
ENSMUSG00000032940	Rbm11	95	84.581	ENSCGRG00001013426	Rbm11	95	84.581	Cricetulus_griseus_chok1gshd
ENSMUSG00000032940	Rbm11	83	82.323	ENSCGRG00000011040	Rbm11	80	82.323	Cricetulus_griseus_crigri
ENSMUSG00000032940	Rbm11	86	37.727	ENSDARG00000020841	rbm7	85	37.615	Danio_rerio
ENSMUSG00000032940	Rbm11	95	73.246	ENSDNOG00000044590	RBM11	87	77.033	Dasypus_novemcinctus
ENSMUSG00000032940	Rbm11	60	87.413	ENSDORG00000000801	Rbm11	100	87.413	Dipodomys_ordii
ENSMUSG00000032940	Rbm11	95	81.498	ENSEASG00005013619	RBM11	95	81.498	Equus_asinus_asinus
ENSMUSG00000032940	Rbm11	92	81.279	ENSECAG00000015417	RBM11	69	81.279	Equus_caballus
ENSMUSG00000032940	Rbm11	95	79.736	ENSFCAG00000018199	RBM11	95	79.736	Felis_catus
ENSMUSG00000032940	Rbm11	82	78.462	ENSFDAG00000012193	RBM11	95	78.462	Fukomys_damarensis
ENSMUSG00000032940	Rbm11	90	55.895	ENSGALG00000044391	RBM11	89	55.895	Gallus_gallus
ENSMUSG00000032940	Rbm11	90	56.332	ENSGAGG00000010715	RBM11	90	55.603	Gopherus_agassizii
ENSMUSG00000032940	Rbm11	95	67.407	ENSGGOG00000025603	RBM11	96	66.667	Gorilla_gorilla
ENSMUSG00000032940	Rbm11	61	45.270	ENSHBUG00000004319	rbm7	56	45.270	Haplochromis_burtoni
ENSMUSG00000032940	Rbm11	95	78.855	ENSHGLG00000013951	RBM11	95	78.855	Heterocephalus_glaber_female
ENSMUSG00000032940	Rbm11	95	78.855	ENSHGLG00100007848	RBM11	95	78.855	Heterocephalus_glaber_male
ENSMUSG00000032940	Rbm11	95	78.414	ENSSTOG00000034273	RBM11	95	78.414	Ictidomys_tridecemlineatus
ENSMUSG00000032940	Rbm11	95	78.761	ENSJJAG00000019251	Rbm11	95	78.855	Jaculus_jaculus
ENSMUSG00000032940	Rbm11	67	40.116	ENSLBEG00000024902	rbm7	62	42.331	Labrus_bergylta
ENSMUSG00000032940	Rbm11	92	51.121	ENSLACG00000008381	-	79	56.150	Latimeria_chalumnae
ENSMUSG00000032940	Rbm11	95	76.211	ENSLAFG00000007082	RBM11	95	76.211	Loxodonta_africana
ENSMUSG00000032940	Rbm11	84	80.500	ENSMFAG00000039455	RBM11	96	66.296	Macaca_fascicularis
ENSMUSG00000032940	Rbm11	95	66.667	ENSMMUG00000020089	RBM11	96	66.296	Macaca_mulatta
ENSMUSG00000032940	Rbm11	95	66.667	ENSMNEG00000030940	RBM11	96	66.296	Macaca_nemestrina
ENSMUSG00000032940	Rbm11	95	66.667	ENSMLEG00000028823	RBM11	96	66.667	Mandrillus_leucophaeus
ENSMUSG00000032940	Rbm11	95	34.800	ENSMAMG00000014145	rbm7	71	40.217	Mastacembelus_armatus
ENSMUSG00000032940	Rbm11	61	45.270	ENSMZEG00005013295	rbm7	56	45.270	Maylandia_zebra
ENSMUSG00000032940	Rbm11	95	86.283	ENSMAUG00000008588	Rbm11	95	86.344	Mesocricetus_auratus
ENSMUSG00000032940	Rbm11	95	81.498	ENSMICG00000037489	RBM11	95	81.498	Microcebus_murinus
ENSMUSG00000032940	Rbm11	95	83.260	ENSMOCG00000004302	Rbm11	95	83.260	Microtus_ochrogaster
ENSMUSG00000032940	Rbm11	73	41.081	ENSMALG00000010901	rbm7	68	41.081	Monopterus_albus
ENSMUSG00000032940	Rbm11	99	98.734	MGP_CAROLIEiJ_G0020874	Rbm11	99	98.734	Mus_caroli
ENSMUSG00000032940	Rbm11	95	94.273	MGP_PahariEiJ_G0016578	Rbm11	95	94.273	Mus_pahari
ENSMUSG00000032940	Rbm11	100	99.160	MGP_SPRETEiJ_G0021780	Rbm11	100	99.160	Mus_spretus
ENSMUSG00000032940	Rbm11	97	81.385	ENSMPUG00000010691	RBM11	98	81.498	Mustela_putorius_furo
ENSMUSG00000032940	Rbm11	87	77.209	ENSMLUG00000005721	RBM11	87	77.209	Myotis_lucifugus
ENSMUSG00000032940	Rbm11	95	77.093	ENSNGAG00000011146	Rbm11	95	77.093	Nannospalax_galili
ENSMUSG00000032940	Rbm11	61	45.946	ENSNBRG00000017104	rbm7	56	45.946	Neolamprologus_brichardi
ENSMUSG00000032940	Rbm11	95	66.296	ENSNLEG00000001741	RBM11	96	65.556	Nomascus_leucogenys
ENSMUSG00000032940	Rbm11	75	59.677	ENSOANG00000008231	-	89	60.000	Ornithorhynchus_anatinus
ENSMUSG00000032940	Rbm11	95	81.498	ENSOCUG00000010409	RBM11	95	81.498	Oryctolagus_cuniculus
ENSMUSG00000032940	Rbm11	74	37.696	ENSORLG00000028880	rbm7	70	37.696	Oryzias_latipes
ENSMUSG00000032940	Rbm11	74	37.696	ENSORLG00020010841	rbm7	69	37.696	Oryzias_latipes_hni
ENSMUSG00000032940	Rbm11	84	81.910	ENSOGAG00000005760	RBM11	99	81.910	Otolemur_garnettii
ENSMUSG00000032940	Rbm11	99	74.286	ENSOARG00000016446	RBM11	96	74.894	Ovis_aries
ENSMUSG00000032940	Rbm11	95	67.778	ENSPPAG00000037461	RBM11	96	67.037	Pan_paniscus
ENSMUSG00000032940	Rbm11	95	80.176	ENSPPRG00000002935	RBM11	95	80.176	Panthera_pardus
ENSMUSG00000032940	Rbm11	95	79.736	ENSPTIG00000016278	RBM11	95	79.736	Panthera_tigris_altaica
ENSMUSG00000032940	Rbm11	95	67.778	ENSPTRG00000013786	RBM11	96	67.037	Pan_troglodytes
ENSMUSG00000032940	Rbm11	95	66.296	ENSPANG00000024393	RBM11	96	66.296	Papio_anubis
ENSMUSG00000032940	Rbm11	50	50.781	ENSPKIG00000016648	rbm7	51	50.781	Paramormyrops_kingsleyae
ENSMUSG00000032940	Rbm11	74	38.462	ENSPMGG00000001523	rbm7	91	55.556	Periophthalmus_magnuspinnatus
ENSMUSG00000032940	Rbm11	95	85.463	ENSPEMG00000016731	Rbm11	95	85.463	Peromyscus_maniculatus_bairdii
ENSMUSG00000032940	Rbm11	96	54.148	ENSPCIG00000013003	-	85	55.665	Phascolarctos_cinereus
ENSMUSG00000032940	Rbm11	95	67.407	ENSPPYG00000011285	RBM11	96	66.667	Pongo_abelii
ENSMUSG00000032940	Rbm11	60	86.014	ENSPCAG00000008368	-	100	86.014	Procavia_capensis
ENSMUSG00000032940	Rbm11	95	81.057	ENSPCOG00000024136	RBM11	95	81.057	Propithecus_coquereli
ENSMUSG00000032940	Rbm11	87	77.184	ENSPVAG00000013858	RBM11	95	76.923	Pteropus_vampyrus
ENSMUSG00000032940	Rbm11	61	45.270	ENSPNYG00000012084	rbm7	56	45.270	Pundamilia_nyererei
ENSMUSG00000032940	Rbm11	100	92.017	ENSRNOG00000029147	Rbm11	95	92.070	Rattus_norvegicus
ENSMUSG00000032940	Rbm11	95	65.926	ENSRBIG00000036380	RBM11	96	65.926	Rhinopithecus_bieti
ENSMUSG00000032940	Rbm11	95	65.926	ENSRROG00000029863	RBM11	96	65.556	Rhinopithecus_roxellana
ENSMUSG00000032940	Rbm11	95	79.295	ENSSBOG00000029034	RBM11	95	77.533	Saimiri_boliviensis_boliviensis
ENSMUSG00000032940	Rbm11	97	47.955	ENSSHAG00000013296	-	89	48.760	Sarcophilus_harrisii
ENSMUSG00000032940	Rbm11	95	34.538	ENSSMAG00000003040	rbm7	70	40.782	Scophthalmus_maximus
ENSMUSG00000032940	Rbm11	95	74.890	ENSSARG00000001717	RBM11	95	74.890	Sorex_araneus
ENSMUSG00000032940	Rbm11	97	52.632	ENSSPUG00000011684	RBM11	87	54.585	Sphenodon_punctatus
ENSMUSG00000032940	Rbm11	99	77.966	ENSSSCG00000037517	RBM11	96	78.855	Sus_scrofa
ENSMUSG00000032940	Rbm11	86	76.471	ENSTBEG00000004121	RBM11	94	78.125	Tupaia_belangeri
ENSMUSG00000032940	Rbm11	99	78.814	ENSTTRG00000007410	RBM11	96	79.295	Tursiops_truncatus
ENSMUSG00000032940	Rbm11	95	80.617	ENSUAMG00000027022	RBM11	95	80.617	Ursus_americanus
ENSMUSG00000032940	Rbm11	88	76.555	ENSVPAG00000000673	RBM11	95	76.500	Vicugna_pacos
ENSMUSG00000032940	Rbm11	95	80.617	ENSVVUG00000023818	RBM11	69	80.617	Vulpes_vulpes
ENSMUSG00000032940	Rbm11	95	45.455	ENSXETG00000005847	rbm11	87	45.946	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000381	regulation of alternative mRNA splicing, via spliceosome	21873635.	IBA	Process
GO:0000381	regulation of alternative mRNA splicing, via spliceosome	21984414.	ISO	Process
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0003727	single-stranded RNA binding	21873635.	IBA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	21984414.	ISO	Component
GO:0005654	nucleoplasm	21984414.	ISO	Component
GO:0006397	mRNA processing	-	IEA	Process
GO:0007275	multicellular organism development	-	IEA	Process
GO:0008266	poly(U) RNA binding	21984414.	IDA	Function
GO:0008266	poly(U) RNA binding	21984414.	ISO	Function
GO:0008380	RNA splicing	-	IEA	Process
GO:0016607	nuclear speck	21984414.	ISO	Component
GO:0030154	cell differentiation	-	IEA	Process
GO:0034599	cellular response to oxidative stress	21984414.	ISO	Process
GO:0042803	protein homodimerization activity	21984414.	ISO	Function