EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000033059 (Gene tree)
Gene ID: 110078
Gene Symbol: Pygb
Alias: -
Full Name: brain glycogen phosphorylase
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 45024
Position: chr2: 150786735-150831758
Accession: 97828
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000129610	-	808	-	-	- (aa)	-	-
ENSMUST00000154366	-	659	-	-	- (aa)	-	-
ENSMUST00000135717	-	531	-	-	- (aa)	-	-
ENSMUST00000139938	-	789	-	-	- (aa)	-	-
ENSMUST00000045441	-	3909	-	ENSMUSP00000035743	843 (aa)	-	Q8CI94

Gene Model

Click here to download ENSMUSG00000033059's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu00500	Starch and sucrose metabolism	KEGG
mmu01100	Metabolic pathways	KEGG
mmu04217	Necroptosis	KEGG
mmu04910	Insulin signaling pathway	KEGG
mmu04922	Glucagon signaling pathway	KEGG
mmu04931	Insulin resistance	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000033059's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000033059	Pygb	99	72.076	FBgn0004507	GlyP	99	72.076	Drosophila_melanogaster
ENSMUSG00000033059	Pygb	100	95.611	ENSG00000100994	PYGB	100	95.611	Homo_sapiens
ENSMUSG00000033059	Pygb	99	81.049	ENSG00000100504	PYGL	99	81.049	Homo_sapiens
ENSMUSG00000033059	Pygb	99	84.267	ENSMUSG00000032648	Pygm	99	84.267	Mus_musculus
ENSMUSG00000033059	Pygb	95	48.633	YPR160W		92	48.157	Saccharomyces_cerevisiae

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003824	catalytic activity	-	IEA	Function
GO:0004645	phosphorylase activity	-	IEA	Function
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0005975	carbohydrate metabolic process	-	IEA	Process
GO:0005977	glycogen metabolic process	-	ISO	Process
GO:0005980	glycogen catabolic process	21873635.	IBA	Process
GO:0005980	glycogen catabolic process	-	ISO	Process
GO:0008144	drug binding	-	ISO	Function
GO:0008152	metabolic process	-	IEA	Process
GO:0008184	glycogen phosphorylase activity	21873635.	IBA	Function
GO:0008184	glycogen phosphorylase activity	-	ISO	Function
GO:0016740	transferase activity	-	IEA	Function
GO:0016757	transferase activity, transferring glycosyl groups	-	IEA	Function
GO:0030170	pyridoxal phosphate binding	21873635.	IBA	Function
GO:0030246	carbohydrate binding	-	ISO	Function
GO:0030424	axon	-	ISO	Component
GO:0042803	protein homodimerization activity	-	ISO	Function