EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000033216 (Gene tree)
Gene ID: 65967
Gene Symbol: Eefsec
Alias: -
Full Name: eukaryotic elongation factor%2C selenocysteine-tRNA-specific
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 189206 bases
Position: chr6:88257334-88446539
Accession: 2137092
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000144824	GTP_EFTU	PF00009.27	4e-26	1	1
ENSMUSP00000144839	GTP_EFTU	PF00009.27	1.8e-25	1	1
ENSMUSP00000131207	GTP_EFTU	PF00009.27	2.2e-25	1	1
ENSMUSP00000145017	GTP_EFTU	PF00009.27	4.6e-06	1	1
ENSMUSP00000145480	GTP_EFTU	PF00009.27	5.8e-06	1	1
ENSMUSP00000144824	MMR_HSR1	PF01926.23	1.2e-05	1	1
ENSMUSP00000144839	MMR_HSR1	PF01926.23	6e-05	1	1
ENSMUSP00000131207	MMR_HSR1	PF01926.23	6.8e-05	1	1
ENSMUSP00000145017	GTP_EFTU_D2	PF03144.25	2.1e-07	1	1
ENSMUSP00000144839	GTP_EFTU_D2	PF03144.25	6e-07	1	1
ENSMUSP00000131207	GTP_EFTU_D2	PF03144.25	6.8e-07	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000205179	-	2208	-	ENSMUSP00000144839	534 (aa)	-	A0A0N4SUV6
ENSMUST00000203886	-	826	-	ENSMUSP00000145017	254 (aa)	-	A0A0N4SVA4
ENSMUST00000203213	-	796	-	ENSMUSP00000145480	242 (aa)	-	A0A0N4SWD9
ENSMUST00000205014	-	672	-	ENSMUSP00000145448	125 (aa)	-	A0A0N4SWB3
ENSMUST00000165242	-	2679	XM_006506464	ENSMUSP00000131207	583 (aa)	XP_006506528	Q9JHW4
ENSMUST00000204459	-	821	-	ENSMUSP00000144824	266 (aa)	-	A0A0N4SUU3

Gene Model

Click here to download ENSMUSG00000033216's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000033216's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000033216	Eefsec	100	96.711	ENSG00000132394	EEFSEC	100	87.940	Homo_sapiens
ENSMUSG00000033216	Eefsec	96	67.755	ENSAPOG00000015931	eefsec	98	63.559	Acanthochromis_polyacanthus
ENSMUSG00000033216	Eefsec	100	96.457	ENSAMEG00000015165	EEFSEC	98	83.811	Ailuropoda_melanoleuca
ENSMUSG00000033216	Eefsec	99	71.481	ENSACIG00000022407	eefsec	99	66.423	Amphilophus_citrinellus
ENSMUSG00000033216	Eefsec	96	68.163	ENSAOCG00000008603	eefsec	98	63.729	Amphiprion_ocellaris
ENSMUSG00000033216	Eefsec	100	66.535	ENSAPEG00000017090	eefsec	98	62.458	Amphiprion_percula
ENSMUSG00000033216	Eefsec	98	67.547	ENSATEG00000002753	eefsec	99	62.312	Anabas_testudineus
ENSMUSG00000033216	Eefsec	98	84.739	ENSAPLG00000006745	EEFSEC	100	79.908	Anas_platyrhynchos
ENSMUSG00000033216	Eefsec	62	81.333	ENSACAG00000028177	-	100	82.166	Anolis_carolinensis
ENSMUSG00000033216	Eefsec	100	96.053	ENSANAG00000032691	EEFSEC	100	87.270	Aotus_nancymaae
ENSMUSG00000033216	Eefsec	99	71.481	ENSACLG00000024565	eefsec	98	66.423	Astatotilapia_calliptera
ENSMUSG00000033216	Eefsec	99	68.874	ENSAMXG00000002260	eefsec	97	62.963	Astyanax_mexicanus
ENSMUSG00000033216	Eefsec	100	92.520	ENSBTAG00000030962	EEFSEC	100	85.980	Bos_taurus
ENSMUSG00000033216	Eefsec	99	33.984	WBGene00008133	efsc-1	92	32.649	Caenorhabditis_elegans
ENSMUSG00000033216	Eefsec	100	96.053	ENSCJAG00000005387	EEFSEC	100	86.767	Callithrix_jacchus
ENSMUSG00000033216	Eefsec	100	95.276	ENSCAFG00000004135	EEFSEC	81	86.855	Canis_familiaris
ENSMUSG00000033216	Eefsec	100	96.711	ENSCAFG00020004811	EEFSEC	100	86.855	Canis_lupus_dingo
ENSMUSG00000033216	Eefsec	100	91.732	ENSCHIG00000021838	EEFSEC	100	86.473	Capra_hircus
ENSMUSG00000033216	Eefsec	100	96.711	ENSTSYG00000012922	EEFSEC	100	88.107	Carlito_syrichta
ENSMUSG00000033216	Eefsec	100	83.465	ENSCAPG00000000084	EEFSEC	98	81.263	Cavia_aperea
ENSMUSG00000033216	Eefsec	100	95.276	ENSCPOG00000024352	EEFSEC	100	94.757	Cavia_porcellus
ENSMUSG00000033216	Eefsec	100	96.053	ENSCCAG00000031336	EEFSEC	100	87.479	Cebus_capucinus
ENSMUSG00000033216	Eefsec	100	96.711	ENSCATG00000019414	EEFSEC	100	89.072	Cercocebus_atys
ENSMUSG00000033216	Eefsec	100	96.711	ENSCLAG00000006973	EEFSEC	100	95.880	Chinchilla_lanigera
ENSMUSG00000033216	Eefsec	100	96.053	ENSCSAG00000008599	EEFSEC	100	87.437	Chlorocebus_sabaeus
ENSMUSG00000033216	Eefsec	99	83.774	ENSCPBG00000014356	EEFSEC	82	82.937	Chrysemys_picta_bellii
ENSMUSG00000033216	Eefsec	98	63.740	ENSCSAVG00000002208	-	100	57.143	Ciona_savignyi
ENSMUSG00000033216	Eefsec	100	96.053	ENSCANG00000031492	EEFSEC	99	87.270	Colobus_angolensis_palliatus
ENSMUSG00000033216	Eefsec	100	98.684	ENSCGRG00001018089	Eefsec	100	96.055	Cricetulus_griseus_chok1gshd
ENSMUSG00000033216	Eefsec	100	98.684	ENSCGRG00000010063	Eefsec	100	96.992	Cricetulus_griseus_crigri
ENSMUSG00000033216	Eefsec	99	71.481	ENSCSEG00000003008	eefsec	99	66.788	Cynoglossus_semilaevis
ENSMUSG00000033216	Eefsec	96	69.136	ENSCVAG00000005381	eefsec	99	62.563	Cyprinodon_variegatus
ENSMUSG00000033216	Eefsec	98	69.170	ENSDARG00000004696	eefsec	99	63.529	Danio_rerio
ENSMUSG00000033216	Eefsec	100	88.583	ENSDNOG00000008925	EEFSEC	100	82.047	Dasypus_novemcinctus
ENSMUSG00000033216	Eefsec	100	66.667	ENSDORG00000000264	Eefsec	99	87.629	Dipodomys_ordii
ENSMUSG00000033216	Eefsec	91	54.733	FBgn0034627	eEFSec	95	45.507	Drosophila_melanogaster
ENSMUSG00000033216	Eefsec	100	92.126	ENSETEG00000007406	EEFSEC	99	77.066	Echinops_telfairi
ENSMUSG00000033216	Eefsec	78	68.817	ENSEBUG00000015029	eefsec	96	50.460	Eptatretus_burgeri
ENSMUSG00000033216	Eefsec	100	97.368	ENSEASG00005006786	EEFSEC	100	88.462	Equus_asinus_asinus
ENSMUSG00000033216	Eefsec	100	97.368	ENSECAG00000016565	EEFSEC	100	88.629	Equus_caballus
ENSMUSG00000033216	Eefsec	99	63.077	ENSELUG00000016632	eefsec	98	61.616	Esox_lucius
ENSMUSG00000033216	Eefsec	100	96.063	ENSFCAG00000006153	EEFSEC	100	87.813	Felis_catus
ENSMUSG00000033216	Eefsec	98	86.093	ENSFALG00000007901	EEFSEC	99	75.102	Ficedula_albicollis
ENSMUSG00000033216	Eefsec	100	96.053	ENSFDAG00000010243	EEFSEC	100	95.395	Fukomys_damarensis
ENSMUSG00000033216	Eefsec	98	67.790	ENSFHEG00000007155	eefsec	98	63.636	Fundulus_heteroclitus
ENSMUSG00000033216	Eefsec	97	62.786	ENSGMOG00000007705	eefsec	98	61.092	Gadus_morhua
ENSMUSG00000033216	Eefsec	98	84.768	ENSGALG00000038684	EEFSEC	99	75.430	Gallus_gallus
ENSMUSG00000033216	Eefsec	99	67.550	ENSGAFG00000021692	eefsec	99	62.331	Gambusia_affinis
ENSMUSG00000033216	Eefsec	98	66.792	ENSGACG00000000793	eefsec	99	63.361	Gasterosteus_aculeatus
ENSMUSG00000033216	Eefsec	98	85.430	ENSGAGG00000002059	EEFSEC	98	75.171	Gopherus_agassizii
ENSMUSG00000033216	Eefsec	100	97.368	ENSGGOG00000001445	EEFSEC	100	89.251	Gorilla_gorilla
ENSMUSG00000033216	Eefsec	98	67.194	ENSHBUG00000008917	eefsec	97	65.736	Haplochromis_burtoni
ENSMUSG00000033216	Eefsec	100	96.457	ENSHGLG00000000094	EEFSEC	100	95.395	Heterocephalus_glaber_female
ENSMUSG00000033216	Eefsec	100	96.457	ENSHGLG00100011393	EEFSEC	96	88.870	Heterocephalus_glaber_male
ENSMUSG00000033216	Eefsec	99	66.154	ENSHCOG00000004193	eefsec	99	62.649	Hippocampus_comes
ENSMUSG00000033216	Eefsec	98	68.821	ENSIPUG00000017291	eefsec	97	66.224	Ictalurus_punctatus
ENSMUSG00000033216	Eefsec	99	94.079	ENSSTOG00000019802	EEFSEC	99	90.417	Ictidomys_tridecemlineatus
ENSMUSG00000033216	Eefsec	100	96.241	ENSJJAG00000020703	-	100	96.711	Jaculus_jaculus
ENSMUSG00000033216	Eefsec	98	66.400	ENSKMAG00000019907	eefsec	98	63.032	Kryptolebias_marmoratus
ENSMUSG00000033216	Eefsec	96	67.901	ENSLBEG00000017908	eefsec	98	63.300	Labrus_bergylta
ENSMUSG00000033216	Eefsec	99	79.470	ENSLACG00000013137	EEFSEC	97	68.665	Latimeria_chalumnae
ENSMUSG00000033216	Eefsec	92	75.200	ENSLOCG00000014535	eefsec	98	65.417	Lepisosteus_oculatus
ENSMUSG00000033216	Eefsec	100	89.804	ENSLAFG00000001997	EEFSEC	100	85.616	Loxodonta_africana
ENSMUSG00000033216	Eefsec	100	96.711	ENSMFAG00000042128	EEFSEC	100	87.940	Macaca_fascicularis
ENSMUSG00000033216	Eefsec	100	96.053	ENSMMUG00000018663	EEFSEC	100	89.278	Macaca_mulatta
ENSMUSG00000033216	Eefsec	100	96.711	ENSMNEG00000028574	EEFSEC	100	88.107	Macaca_nemestrina
ENSMUSG00000033216	Eefsec	100	96.711	ENSMLEG00000041771	EEFSEC	93	88.911	Mandrillus_leucophaeus
ENSMUSG00000033216	Eefsec	98	72.453	ENSMAMG00000023964	eefsec	99	67.658	Mastacembelus_armatus
ENSMUSG00000033216	Eefsec	99	71.481	ENSMZEG00005009380	eefsec	98	66.423	Maylandia_zebra
ENSMUSG00000033216	Eefsec	98	83.936	ENSMGAG00000007243	EEFSEC	100	75.064	Meleagris_gallopavo
ENSMUSG00000033216	Eefsec	100	97.368	ENSMAUG00000011197	Eefsec	100	97.368	Mesocricetus_auratus
ENSMUSG00000033216	Eefsec	100	97.744	ENSMOCG00000017748	Eefsec	100	97.744	Microtus_ochrogaster
ENSMUSG00000033216	Eefsec	100	71.324	ENSMMOG00000021820	eefsec	99	66.667	Mola_mola
ENSMUSG00000033216	Eefsec	99	92.430	ENSMODG00000008034	EEFSEC	91	82.649	Monodelphis_domestica
ENSMUSG00000033216	Eefsec	99	67.578	ENSMALG00000016211	eefsec	99	65.736	Monopterus_albus
ENSMUSG00000033216	Eefsec	100	99.624	MGP_CAROLIEiJ_G0028627	Eefsec	100	99.624	Mus_caroli
ENSMUSG00000033216	Eefsec	100	99.624	MGP_PahariEiJ_G0022366	Eefsec	100	99.624	Mus_pahari
ENSMUSG00000033216	Eefsec	100	100.000	MGP_SPRETEiJ_G0029640	Eefsec	100	100.000	Mus_spretus
ENSMUSG00000033216	Eefsec	100	95.395	ENSMPUG00000017340	EEFSEC	96	87.395	Mustela_putorius_furo
ENSMUSG00000033216	Eefsec	100	95.395	ENSMLUG00000004261	EEFSEC	100	87.273	Myotis_lucifugus
ENSMUSG00000033216	Eefsec	100	96.992	ENSNGAG00000023278	-	100	96.992	Nannospalax_galili
ENSMUSG00000033216	Eefsec	99	71.852	ENSNBRG00000002387	eefsec	98	66.788	Neolamprologus_brichardi
ENSMUSG00000033216	Eefsec	100	96.053	ENSNLEG00000014303	EEFSEC	100	87.605	Nomascus_leucogenys
ENSMUSG00000033216	Eefsec	98	92.763	ENSMEUG00000005747	EEFSEC	100	79.430	Notamacropus_eugenii
ENSMUSG00000033216	Eefsec	100	96.063	ENSOPRG00000011276	EEFSEC	100	88.196	Ochotona_princeps
ENSMUSG00000033216	Eefsec	100	94.488	ENSODEG00000002928	EEFSEC	100	93.609	Octodon_degus
ENSMUSG00000033216	Eefsec	96	69.136	ENSONIG00000019038	eefsec	100	61.368	Oreochromis_niloticus
ENSMUSG00000033216	Eefsec	100	85.526	ENSOANG00000009108	EEFSEC	99	76.860	Ornithorhynchus_anatinus
ENSMUSG00000033216	Eefsec	100	97.368	ENSOCUG00000016517	EEFSEC	100	87.227	Oryctolagus_cuniculus
ENSMUSG00000033216	Eefsec	99	70.741	ENSORLG00000001377	eefsec	98	65.693	Oryzias_latipes
ENSMUSG00000033216	Eefsec	99	70.741	ENSORLG00020000729	eefsec	98	69.565	Oryzias_latipes_hni
ENSMUSG00000033216	Eefsec	96	67.480	ENSORLG00015001986	eefsec	98	63.283	Oryzias_latipes_hsok
ENSMUSG00000033216	Eefsec	100	64.706	ENSOMEG00000010071	eefsec	89	61.600	Oryzias_melastigma
ENSMUSG00000033216	Eefsec	78	67.925	ENSOMEG00000019307	-	86	67.925	Oryzias_melastigma
ENSMUSG00000033216	Eefsec	100	96.457	ENSOGAG00000014084	EEFSEC	100	88.641	Otolemur_garnettii
ENSMUSG00000033216	Eefsec	100	92.126	ENSOARG00000004600	EEFSEC	100	87.831	Ovis_aries
ENSMUSG00000033216	Eefsec	100	96.711	ENSPPAG00000030936	EEFSEC	100	88.107	Pan_paniscus
ENSMUSG00000033216	Eefsec	100	96.063	ENSPPRG00000002846	EEFSEC	100	88.610	Panthera_pardus
ENSMUSG00000033216	Eefsec	99	76.613	ENSPPRG00000002794	-	76	76.613	Panthera_pardus
ENSMUSG00000033216	Eefsec	100	96.063	ENSPTIG00000013855	EEFSEC	92	88.409	Panthera_tigris_altaica
ENSMUSG00000033216	Eefsec	100	96.711	ENSPTRG00000015353	EEFSEC	100	88.275	Pan_troglodytes
ENSMUSG00000033216	Eefsec	100	96.711	ENSPANG00000017041	EEFSEC	100	88.107	Papio_anubis
ENSMUSG00000033216	Eefsec	99	74.721	ENSPKIG00000005220	eefsec	98	69.963	Paramormyrops_kingsleyae
ENSMUSG00000033216	Eefsec	98	83.600	ENSPSIG00000015135	EEFSEC	97	78.846	Pelodiscus_sinensis
ENSMUSG00000033216	Eefsec	99	67.658	ENSPMGG00000020300	eefsec	99	63.283	Periophthalmus_magnuspinnatus
ENSMUSG00000033216	Eefsec	100	97.368	ENSPEMG00000013677	Eefsec	100	97.368	Peromyscus_maniculatus_bairdii
ENSMUSG00000033216	Eefsec	99	70.412	ENSPMAG00000006779	eefsec	99	65.356	Petromyzon_marinus
ENSMUSG00000033216	Eefsec	100	92.763	ENSPCIG00000020494	EEFSEC	100	79.835	Phascolarctos_cinereus
ENSMUSG00000033216	Eefsec	98	67.200	ENSPFOG00000003748	eefsec	99	62.712	Poecilia_formosa
ENSMUSG00000033216	Eefsec	98	67.200	ENSPLAG00000018012	eefsec	99	62.712	Poecilia_latipinna
ENSMUSG00000033216	Eefsec	98	67.200	ENSPMEG00000001202	eefsec	99	62.732	Poecilia_mexicana
ENSMUSG00000033216	Eefsec	98	67.200	ENSPREG00000012235	eefsec	99	62.881	Poecilia_reticulata
ENSMUSG00000033216	Eefsec	100	96.053	ENSPPYG00000013436	EEFSEC	100	87.437	Pongo_abelii
ENSMUSG00000033216	Eefsec	97	77.642	ENSPCAG00000005883	EEFSEC	100	77.170	Procavia_capensis
ENSMUSG00000033216	Eefsec	100	89.474	ENSPCOG00000023432	EEFSEC	100	81.176	Propithecus_coquereli
ENSMUSG00000033216	Eefsec	100	94.667	ENSPVAG00000007070	EEFSEC	65	87.405	Pteropus_vampyrus
ENSMUSG00000033216	Eefsec	99	71.481	ENSPNYG00000005726	eefsec	98	66.423	Pundamilia_nyererei
ENSMUSG00000033216	Eefsec	99	68.874	ENSPNAG00000016724	eefsec	99	62.857	Pygocentrus_nattereri
ENSMUSG00000033216	Eefsec	100	99.624	ENSRNOG00000012954	Eefsec	100	97.599	Rattus_norvegicus
ENSMUSG00000033216	Eefsec	100	96.053	ENSRBIG00000032635	EEFSEC	100	87.437	Rhinopithecus_bieti
ENSMUSG00000033216	Eefsec	94	95.181	ENSRROG00000030260	-	89	90.566	Rhinopithecus_roxellana
ENSMUSG00000033216	Eefsec	100	96.053	ENSSBOG00000031478	EEFSEC	100	88.866	Saimiri_boliviensis_boliviensis
ENSMUSG00000033216	Eefsec	100	92.763	ENSSHAG00000014760	EEFSEC	100	78.601	Sarcophilus_harrisii
ENSMUSG00000033216	Eefsec	98	69.565	ENSSFOG00015021109	eefsec	98	62.603	Scleropages_formosus
ENSMUSG00000033216	Eefsec	96	68.724	ENSSMAG00000001454	eefsec	99	63.591	Scophthalmus_maximus
ENSMUSG00000033216	Eefsec	96	73.152	ENSSDUG00000007924	eefsec	99	68.199	Seriola_dumerili
ENSMUSG00000033216	Eefsec	98	67.939	ENSSLDG00000024985	eefsec	98	62.371	Seriola_lalandi_dorsalis
ENSMUSG00000033216	Eefsec	73	86.813	ENSSARG00000003789	-	56	88.235	Sorex_araneus
ENSMUSG00000033216	Eefsec	97	84.146	ENSSPUG00000004191	EEFSEC	100	73.140	Sphenodon_punctatus
ENSMUSG00000033216	Eefsec	98	64.000	ENSSPUG00000004177	-	89	64.000	Sphenodon_punctatus
ENSMUSG00000033216	Eefsec	99	71.481	ENSSPAG00000001320	eefsec	99	66.058	Stegastes_partitus
ENSMUSG00000033216	Eefsec	100	92.913	ENSSSCG00000011619	EEFSEC	100	87.521	Sus_scrofa
ENSMUSG00000033216	Eefsec	98	86.755	ENSTGUG00000007895	EEFSEC	100	75.726	Taeniopygia_guttata
ENSMUSG00000033216	Eefsec	96	67.490	ENSTRUG00000010327	eefsec	98	62.162	Takifugu_rubripes
ENSMUSG00000033216	Eefsec	96	68.313	ENSTNIG00000003225	eefsec	99	63.131	Tetraodon_nigroviridis
ENSMUSG00000033216	Eefsec	100	92.913	ENSTTRG00000000994	EEFSEC	100	86.655	Tursiops_truncatus
ENSMUSG00000033216	Eefsec	100	96.850	ENSUAMG00000017283	EEFSEC	100	88.777	Ursus_americanus
ENSMUSG00000033216	Eefsec	100	95.276	ENSVVUG00000018372	EEFSEC	91	90.300	Vulpes_vulpes
ENSMUSG00000033216	Eefsec	98	81.526	ENSXETG00000002066	eefsec	99	75.267	Xenopus_tropicalis
ENSMUSG00000033216	Eefsec	98	67.164	ENSXCOG00000019916	eefsec	99	62.669	Xiphophorus_couchianus
ENSMUSG00000033216	Eefsec	98	66.791	ENSXMAG00000001839	eefsec	99	62.669	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000049	tRNA binding	10970870.11265756.16508009.22992746.	IDA	Function
GO:0000166	nucleotide binding	-	IEA	Function
GO:0001514	selenocysteine incorporation	21873635.	IBA	Process
GO:0001514	selenocysteine incorporation	10970870.11265756.	IDA	Process
GO:0001514	selenocysteine incorporation	10992298.11890935.22992746.	IMP	Process
GO:0003746	translation elongation factor activity	21873635.	IBA	Function
GO:0003746	translation elongation factor activity	22992746.	IDA	Function
GO:0003924	GTPase activity	22992746.	IDA	Function
GO:0005515	protein binding	22992746.	IPI	Function
GO:0005525	GTP binding	10970870.11265756.	IDA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0005739	mitochondrion	18614015.	HDA	Component
GO:0006412	translation	-	IEA	Process
GO:0006414	translational elongation	21873635.	IBA	Process
GO:0035368	selenocysteine insertion sequence binding	22992746.	IDA	Function
GO:0043021	ribonucleoprotein complex binding	22992746.	IDA	Function
GO:1990904	ribonucleoprotein complex	22992746.	IDA	Component