EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000033392 (Gene tree)
Gene ID: 76499
Gene Symbol: Clasp2
Alias: 1500004F14Rik|8030404L10Rik|CLASP2|CLASP2alpha|CLASP2beta|CLASP2gamma
Full Name: CLIP associating protein 2
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 178210
Position: chr9: 113741473-113919682
Accession: 1923749
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	RBDmap & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000166734	-	4108	XM_006512390	ENSMUSP00000130201	1287 (aa)	XP_006512453	Q08EB6
ENSMUST00000213663	-	2727	-	ENSMUSP00000150145	600 (aa)	-	A0A1L1ST22
ENSMUST00000213902	-	4655	-	-	- (aa)	-	-
ENSMUST00000111838	-	5609	XM_017313686	ENSMUSP00000107469	1286 (aa)	XP_017169175	E9Q8N5
ENSMUST00000213966	-	1487	-	-	- (aa)	-	-
ENSMUST00000163895	-	4112	-	ENSMUSP00000128460	1307 (aa)	-	F7DCH5
ENSMUST00000214522	-	4159	XM_006512384	ENSMUSP00000149670	1304 (aa)	XP_006512447	Q08EB5
ENSMUST00000214860	-	2773	-	-	- (aa)	-	-
ENSMUST00000216280	-	1927	-	-	- (aa)	-	-
ENSMUST00000215022	-	4125	-	ENSMUSP00000149685	103 (aa)	-	A0A1L1SRY3
ENSMUST00000216817	-	2234	-	ENSMUSP00000150741	400 (aa)	-	Q8BSE7

Gene Model

Click here to download ENSMUSG00000033392's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000033392's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000033392	Clasp2	100	97.425	ENSG00000163539	CLASP2	100	98.876	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000226	microtubule cytoskeleton organization	-	ISO	Process
GO:0000775	chromosome, centromeric region	-	IEA	Component
GO:0000776	kinetochore	-	ISO	Component
GO:0002162	dystroglycan binding	-	ISO	Function
GO:0005515	protein binding	11290329.18854161.24211587.	IPI	Function
GO:0005694	chromosome	-	IEA	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0005794	Golgi apparatus	11290329.	IDA	Component
GO:0005794	Golgi apparatus	-	ISO	Component
GO:0005802	trans-Golgi network	-	ISO	Component
GO:0005829	cytosol	-	ISO	Component
GO:0005856	cytoskeleton	-	IEA	Component
GO:0005874	microtubule	-	ISO	Component
GO:0005874	microtubule	-	ISO	Component
GO:0005881	cytoplasmic microtubule	11290329.17113391.	IDA	Component
GO:0005881	cytoplasmic microtubule	-	ISO	Component
GO:0005886	plasma membrane	-	ISO	Component
GO:0005925	focal adhesion	-	ISO	Component
GO:0005938	cell cortex	-	ISO	Component
GO:0006903	vesicle targeting	-	ISO	Process
GO:0007020	microtubule nucleation	-	ISO	Process
GO:0007026	negative regulation of microtubule depolymerization	11290329.	IDA	Process
GO:0007026	negative regulation of microtubule depolymerization	17113391.	IMP	Process
GO:0007026	negative regulation of microtubule depolymerization	-	ISO	Process
GO:0007030	Golgi organization	-	ISO	Process
GO:0007049	cell cycle	-	IEA	Process
GO:0007052	mitotic spindle organization	-	ISO	Process
GO:0007163	establishment or maintenance of cell polarity	17113391.	IMP	Process
GO:0008017	microtubule binding	11290329.	IDA	Function
GO:0008017	microtubule binding	-	ISO	Function
GO:0010458	exit from mitosis	-	ISO	Process
GO:0010470	regulation of gastrulation	-	ISO	Process
GO:0010634	positive regulation of epithelial cell migration	-	ISO	Process
GO:0010717	regulation of epithelial to mesenchymal transition	-	ISO	Process
GO:0016020	membrane	-	IEA	Component
GO:0016477	cell migration	17113391.	IMP	Process
GO:0030516	regulation of axon extension	-	ISO	Process
GO:0031023	microtubule organizing center organization	-	ISO	Process
GO:0031110	regulation of microtubule polymerization or depolymerization	-	ISO	Process
GO:0031113	regulation of microtubule polymerization	-	ISO	Process
GO:0031252	cell leading edge	24211587.	IDA	Component
GO:0031252	cell leading edge	-	ISO	Component
GO:0032587	ruffle membrane	-	ISO	Component
GO:0032886	regulation of microtubule-based process	-	ISO	Process
GO:0032956	regulation of actin cytoskeleton organization	-	ISO	Process
GO:0034453	microtubule anchoring	-	ISO	Process
GO:0035791	platelet-derived growth factor receptor-beta signaling pathway	-	ISO	Process
GO:0042995	cell projection	-	IEA	Component
GO:0044295	axonal growth cone	-	ISO	Component
GO:0045180	basal cortex	-	ISO	Component
GO:0045921	positive regulation of exocytosis	-	ISO	Process
GO:0051010	microtubule plus-end binding	-	ISO	Function
GO:0051015	actin filament binding	-	ISO	Function
GO:0051301	cell division	-	IEA	Process
GO:0051321	meiotic cell cycle	-	IEA	Process
GO:0051497	negative regulation of stress fiber assembly	-	ISO	Process
GO:0051895	negative regulation of focal adhesion assembly	-	ISO	Process
GO:0072659	protein localization to plasma membrane	-	ISO	Process
GO:0072686	mitotic spindle	-	ISO	Component
GO:0090091	positive regulation of extracellular matrix disassembly	-	ISO	Process
GO:1903690	negative regulation of wound healing, spreading of epidermal cells	-	ISO	Process
GO:1903754	cortical microtubule plus-end	-	ISO	Component
GO:1904261	positive regulation of basement membrane assembly involved in embryonic body morphogenesis	-	ISO	Process
GO:1990782	protein tyrosine kinase binding	-	ISO	Function