EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Expression
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSMUSG00000033760 (Gene tree)
Gene ID
66704
Gene Symbol
Rbm4b
Alias
4921506I22Rik|Lark2
Full Name
RNA binding motif protein 4B
Gene Type
protein_coding
Species
Mus_musculus
Status
confidence
Strand
Plus strand
Length
10523 bases
Position
chr19:4756543-4767065
Accession
1913954
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMUSP00000038256zf-CCHCPF00098.234.1e-0711
ENSMUSP00000038256RRM_5PF13893.64.5e-0812
ENSMUSP00000038256RRM_5PF13893.64.5e-0822
ENSMUSP00000038256RRM_1PF00076.221.7e-3412
ENSMUSP00000038256RRM_1PF00076.221.7e-3422
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
27281784Identification of RNA binding Proteins in Macrophages by Interactome CaptureIC & RAW264.72016 Jun 8Liepelt ADOI: 10.1074/mcp.M115.056564
23912277The RNA binding protein repertoire of embryonic stem cellsIC & mESC2013 Aug 4Kwon SCDOI: 10.1038/nsmb.2638
27452465The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart DiseaseIC & HL_12016 Jul 21Liao YDOI: 10.1016/j.celrep.2016.06.084
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMUST00000182821-1443--- (aa)--
ENSMUST00000183008-1211--- (aa)--
ENSMUST00000036744-1783XM_006531823ENSMUSP00000038256357 (aa)XP_006531886Q8VE92
ENSMUST00000182324-407--- (aa)--
ENSMUST00000183332-5670--- (aa)--
ENSMUST00000182200-3109-ENSMUSP00000138146152 (aa)-S4R1A6
ENSMUST00000182065-4194--- (aa)--
Gene Model
Click here to download ENSMUSG00000033760's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000033760's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMUSG00000033760Rbm4b9230.345ENSMUSG00000030846Tial18430.088
ENSMUSG00000033760Rbm4b9144.286ENSMUSG00000006456Rbm149441.964
ENSMUSG00000033760Rbm4b9199.281ENSMUSG00000096370Gm2199210085.873
ENSMUSG00000033760Rbm4b5032.911ENSMUSG00000024097Srsf78135.135
ENSMUSG00000033760Rbm4b5832.353ENSMUSG00000042396Rbm76532.353
ENSMUSG00000033760Rbm4b9530.488ENSMUSG00000071337Tia18530.488
ENSMUSG00000033760Rbm4b7233.036ENSMUSG00000021938Pspc19335.484
ENSMUSG00000033760Rbm4b9497.203ENSMUSG00000094936Rbm4100100.000
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMUSG00000033760Rbm4b9698.780ENSG00000173933RBM410095.804Homo_sapiens
ENSMUSG00000033760Rbm4b10096.379ENSG00000173914RBM4B9997.872Homo_sapiens
ENSMUSG00000033760Rbm4b9962.022ENSG00000248643RBM14-RBM410060.548Homo_sapiens
ENSMUSG00000033760Rbm4b9197.842ENSAMEG00000010914RBM410085.205Ailuropoda_melanoleuca
ENSMUSG00000033760Rbm4b10096.657ENSAMEG00000010906RBM4B10096.657Ailuropoda_melanoleuca
ENSMUSG00000033760Rbm4b9693.151ENSANAG00000033986-8893.151Aotus_nancymaae
ENSMUSG00000033760Rbm4b10096.100ENSANAG00000023478RBM4B9997.872Aotus_nancymaae
ENSMUSG00000033760Rbm4b10095.822ENSBTAG00000000423RBM4B10095.822Bos_taurus
ENSMUSG00000033760Rbm4b9197.842ENSBTAG00000031688RBM410085.912Bos_taurus
ENSMUSG00000033760Rbm4b10096.379ENSCJAG00000013666RBM4B9997.872Callithrix_jacchus
ENSMUSG00000033760Rbm4b9197.842ENSCAFG00000012388RBM410085.205Canis_familiaris
ENSMUSG00000033760Rbm4b10096.379ENSCAFG00000012378RBM4B10096.379Canis_familiaris
ENSMUSG00000033760Rbm4b9197.842ENSCAFG00020015515RBM410085.205Canis_lupus_dingo
ENSMUSG00000033760Rbm4b10096.379ENSCAFG00020015519RBM4B10096.379Canis_lupus_dingo
ENSMUSG00000033760Rbm4b10096.100ENSCHIG00000008907RBM4B10096.100Capra_hircus
ENSMUSG00000033760Rbm4b9197.842ENSCHIG00000020613RBM410085.912Capra_hircus
ENSMUSG00000033760Rbm4b9978.689ENSTSYG00000036168-9878.689Carlito_syrichta
ENSMUSG00000033760Rbm4b6588.085ENSTSYG00000009580RBM4B9687.234Carlito_syrichta
ENSMUSG00000033760Rbm4b10096.936ENSCAPG00000009570RBM4B10096.936Cavia_aperea
ENSMUSG00000033760Rbm4b9496.503ENSCAPG00000016600RBM410096.503Cavia_aperea
ENSMUSG00000033760Rbm4b9496.503ENSCPOG00000013194RBM410096.503Cavia_porcellus
ENSMUSG00000033760Rbm4b10096.936ENSCPOG00000013689RBM4B10096.936Cavia_porcellus
ENSMUSG00000033760Rbm4b9493.007ENSCCAG00000007508-10093.007Cebus_capucinus
ENSMUSG00000033760Rbm4b9172.464ENSCCAG00000023319-10071.642Cebus_capucinus
ENSMUSG00000033760Rbm4b10096.379ENSCCAG00000016501RBM4B9997.872Cebus_capucinus
ENSMUSG00000033760Rbm4b10096.379ENSCATG00000035353RBM4B9997.872Cercocebus_atys
ENSMUSG00000033760Rbm4b10097.207ENSCLAG00000015287RBM4B10097.207Chinchilla_lanigera
ENSMUSG00000033760Rbm4b9496.503ENSCLAG00000014756RBM410096.503Chinchilla_lanigera
ENSMUSG00000033760Rbm4b10096.379ENSCSAG00000008361RBM4B10096.379Chlorocebus_sabaeus
ENSMUSG00000033760Rbm4b6177.533ENSCHOG00000009753RBM14-RBM410076.652Choloepus_hoffmanni
ENSMUSG00000033760Rbm4b10096.100ENSCHOG00000002892RBM4B10096.100Choloepus_hoffmanni
ENSMUSG00000033760Rbm4b9992.053ENSCPBG00000023800-10072.895Chrysemys_picta_bellii
ENSMUSG00000033760Rbm4b10096.379ENSCANG00000021868RBM4B9997.872Colobus_angolensis_palliatus
ENSMUSG00000033760Rbm4b9497.203ENSCGRG00001016609-10097.203Cricetulus_griseus_chok1gshd
ENSMUSG00000033760Rbm4b10097.479ENSCGRG00001024693Rbm4b10097.479Cricetulus_griseus_chok1gshd
ENSMUSG00000033760Rbm4b9497.203ENSCGRG00000010183-10097.203Cricetulus_griseus_crigri
ENSMUSG00000033760Rbm4b10097.479ENSCGRG00000012112Rbm4b10097.479Cricetulus_griseus_crigri
ENSMUSG00000033760Rbm4b10094.972ENSDNOG00000045639-10093.296Dasypus_novemcinctus
ENSMUSG00000033760Rbm4b10096.089ENSDNOG00000019500-10096.089Dasypus_novemcinctus
ENSMUSG00000033760Rbm4b9197.122ENSDNOG00000032390RBM410084.658Dasypus_novemcinctus
ENSMUSG00000033760Rbm4b10096.919ENSDORG00000029108Rbm4b10096.919Dipodomys_ordii
ENSMUSG00000033760Rbm4b9495.105ENSDORG00000004538-10095.105Dipodomys_ordii
ENSMUSG00000033760Rbm4b6170.909ENSETEG00000018142-10070.909Echinops_telfairi
ENSMUSG00000033760Rbm4b9197.842ENSEASG00005005064RBM410086.150Equus_asinus_asinus
ENSMUSG00000033760Rbm4b10096.379ENSEASG00005005068RBM4B10096.379Equus_asinus_asinus
ENSMUSG00000033760Rbm4b9197.842ENSECAG00000022940RBM410086.150Equus_caballus
ENSMUSG00000033760Rbm4b10096.100ENSECAG00000022987RBM4B10096.100Equus_caballus
ENSMUSG00000033760Rbm4b10090.110ENSEEUG00000000058RBM4B10089.011Erinaceus_europaeus
ENSMUSG00000033760Rbm4b9495.804ENSFCAG00000029651RBM410095.804Felis_catus
ENSMUSG00000033760Rbm4b10096.936ENSFCAG00000007394RBM4B10096.936Felis_catus
ENSMUSG00000033760Rbm4b9197.122ENSFALG00000002073-10068.564Ficedula_albicollis
ENSMUSG00000033760Rbm4b9985.714ENSFDAG00000013661-10085.714Fukomys_damarensis
ENSMUSG00000033760Rbm4b10096.648ENSFDAG00000015530RBM4B10096.648Fukomys_damarensis
ENSMUSG00000033760Rbm4b9496.503ENSFDAG00000005447RBM410096.503Fukomys_damarensis
ENSMUSG00000033760Rbm4b9197.122ENSGALG00000040489-8597.122Gallus_gallus
ENSMUSG00000033760Rbm4b9197.122ENSGALG00000037946-10075.134Gallus_gallus
ENSMUSG00000033760Rbm4b9196.403ENSGAGG00000008553-10072.632Gopherus_agassizii
ENSMUSG00000033760Rbm4b10096.379ENSGGOG00000011698RBM4B9997.872Gorilla_gorilla
ENSMUSG00000033760Rbm4b9973.333ENSGGOG00000043023-9878.102Gorilla_gorilla
ENSMUSG00000033760Rbm4b10096.936ENSHGLG00000016412-10096.936Heterocephalus_glaber_female
ENSMUSG00000033760Rbm4b9165.468ENSHGLG00000000117-9569.638Heterocephalus_glaber_female
ENSMUSG00000033760Rbm4b9496.503ENSHGLG00000009991RBM410096.503Heterocephalus_glaber_female
ENSMUSG00000033760Rbm4b10082.073ENSHGLG00000002853-10081.513Heterocephalus_glaber_female
ENSMUSG00000033760Rbm4b9496.503ENSHGLG00100003854RBM410096.503Heterocephalus_glaber_male
ENSMUSG00000033760Rbm4b9387.324ENSHGLG00100020033-10082.991Heterocephalus_glaber_male
ENSMUSG00000033760Rbm4b10096.927ENSHGLG00100003978-10096.927Heterocephalus_glaber_male
ENSMUSG00000033760Rbm4b9495.804ENSSTOG00000022811RBM410095.804Ictidomys_tridecemlineatus
ENSMUSG00000033760Rbm4b10096.936ENSSTOG00000011226RBM4B10096.936Ictidomys_tridecemlineatus
ENSMUSG00000033760Rbm4b10095.238ENSJJAG00000020870Rbm4b10095.238Jaculus_jaculus
ENSMUSG00000033760Rbm4b9377.465ENSJJAG00000003168-9277.465Jaculus_jaculus
ENSMUSG00000033760Rbm4b9199.281ENSLAFG00000028147-10084.358Loxodonta_africana
ENSMUSG00000033760Rbm4b9399.281ENSLAFG00000002285RBM4B10090.251Loxodonta_africana
ENSMUSG00000033760Rbm4b10096.379ENSMFAG00000033927RBM4B97100.000Macaca_fascicularis
ENSMUSG00000033760Rbm4b10096.379ENSMNEG00000043371RBM4B9997.872Macaca_nemestrina
ENSMUSG00000033760Rbm4b10096.379ENSMLEG00000028563RBM4B97100.000Mandrillus_leucophaeus
ENSMUSG00000033760Rbm4b10098.319ENSMAUG00000017027Rbm4b10098.319Mesocricetus_auratus
ENSMUSG00000033760Rbm4b9491.608ENSMICG00000003817-10091.608Microcebus_murinus
ENSMUSG00000033760Rbm4b10095.822ENSMICG00000003820RBM4B9997.872Microcebus_murinus
ENSMUSG00000033760Rbm4b9197.101ENSMICG00000047975-9597.101Microcebus_murinus
ENSMUSG00000033760Rbm4b10098.319ENSMOCG00000001835Rbm4b10098.319Microtus_ochrogaster
ENSMUSG00000033760Rbm4b9196.403ENSMODG00000008056-10083.696Monodelphis_domestica
ENSMUSG00000033760Rbm4b10099.720MGP_CAROLIEiJ_G0022515Rbm4b10099.720Mus_caroli
ENSMUSG00000033760Rbm4b9497.203MGP_CAROLIEiJ_G0022516-10097.203Mus_caroli
ENSMUSG00000033760Rbm4b9961.878MGP_CAROLIEiJ_G0022514-10061.326Mus_caroli
ENSMUSG00000033760Rbm4b9199.281MGP_PahariEiJ_G0014011-10085.635Mus_pahari
ENSMUSG00000033760Rbm4b9497.203MGP_PahariEiJ_G0014013-10097.203Mus_pahari
ENSMUSG00000033760Rbm4b10099.720MGP_PahariEiJ_G0014012Rbm4b10099.720Mus_pahari
ENSMUSG00000033760Rbm4b10068.421MGP_SPRETEiJ_G0023430-10067.802Mus_spretus
ENSMUSG00000033760Rbm4b10068.421MGP_SPRETEiJ_G0023428-9467.802Mus_spretus
ENSMUSG00000033760Rbm4b10092.143MGP_SPRETEiJ_G0023429-10092.143Mus_spretus
ENSMUSG00000033760Rbm4b10096.379ENSMPUG00000003450RBM4B10096.379Mustela_putorius_furo
ENSMUSG00000033760Rbm4b9197.842ENSMPUG00000003443RBM410084.932Mustela_putorius_furo
ENSMUSG00000033760Rbm4b10093.838ENSMLUG00000001290RBM4B10093.277Myotis_lucifugus
ENSMUSG00000033760Rbm4b9197.122ENSMLUG00000004076RBM49583.425Myotis_lucifugus
ENSMUSG00000033760Rbm4b10097.479ENSNGAG00000016292Rbm4b10097.479Nannospalax_galili
ENSMUSG00000033760Rbm4b10094.150ENSNLEG00000006213RBM4B9997.872Nomascus_leucogenys
ENSMUSG00000033760Rbm4b10092.258ENSNLEG00000035021RBM410095.804Nomascus_leucogenys
ENSMUSG00000033760Rbm4b6178.855ENSMEUG00000005739-10077.974Notamacropus_eugenii
ENSMUSG00000033760Rbm4b9197.842ENSMEUG00000001445-10086.777Notamacropus_eugenii
ENSMUSG00000033760Rbm4b9197.842ENSOPRG00000009149RBM410085.479Ochotona_princeps
ENSMUSG00000033760Rbm4b10096.100ENSOPRG00000009158RBM4B10096.100Ochotona_princeps
ENSMUSG00000033760Rbm4b9086.861ENSODEG00000001866-10071.389Octodon_degus
ENSMUSG00000033760Rbm4b9493.007ENSODEG00000019143-10093.007Octodon_degus
ENSMUSG00000033760Rbm4b9474.825ENSODEG00000006635-10074.825Octodon_degus
ENSMUSG00000033760Rbm4b10096.379ENSODEG00000017696-10096.379Octodon_degus
ENSMUSG00000033760Rbm4b9494.406ENSODEG00000020039-10094.406Octodon_degus
ENSMUSG00000033760Rbm4b9198.561ENSOANG00000011036-10086.034Ornithorhynchus_anatinus
ENSMUSG00000033760Rbm4b9198.561ENSOANG00000003143-8477.933Ornithorhynchus_anatinus
ENSMUSG00000033760Rbm4b10096.936ENSOCUG00000006695LARK10096.936Oryctolagus_cuniculus
ENSMUSG00000033760Rbm4b9197.842ENSOCUG00000004731RBM410084.932Oryctolagus_cuniculus
ENSMUSG00000033760Rbm4b10096.657ENSOGAG00000015648RBM4B10096.657Otolemur_garnettii
ENSMUSG00000033760Rbm4b9197.842ENSOGAG00000015647RBM410084.384Otolemur_garnettii
ENSMUSG00000033760Rbm4b10093.113ENSOARG00000007759RBM4B10093.939Ovis_aries
ENSMUSG00000033760Rbm4b9197.842ENSOARG00000007700RBM410084.807Ovis_aries
ENSMUSG00000033760Rbm4b10096.379ENSPPAG00000015125RBM4B9997.872Pan_paniscus
ENSMUSG00000033760Rbm4b9495.804ENSPPRG00000003533RBM410095.804Panthera_pardus
ENSMUSG00000033760Rbm4b10096.657ENSPPRG00000003388RBM4B9997.872Panthera_pardus
ENSMUSG00000033760Rbm4b9496.503ENSPTIG00000016180RBM410096.503Panthera_tigris_altaica
ENSMUSG00000033760Rbm4b10096.657ENSPTIG00000015426RBM4B9997.872Panthera_tigris_altaica
ENSMUSG00000033760Rbm4b10096.379ENSPTRG00000003935RBM4B9997.872Pan_troglodytes
ENSMUSG00000033760Rbm4b10096.379ENSPANG00000020672RBM4B9997.872Papio_anubis
ENSMUSG00000033760Rbm4b9195.683ENSPSIG00000003430-10074.394Pelodiscus_sinensis
ENSMUSG00000033760Rbm4b9195.683ENSPSIG00000003477-9379.861Pelodiscus_sinensis
ENSMUSG00000033760Rbm4b10098.883ENSPEMG00000009144Rbm4b10098.883Peromyscus_maniculatus_bairdii
ENSMUSG00000033760Rbm4b10096.379ENSPPYG00000003010RBM4B10096.379Pongo_abelii
ENSMUSG00000033760Rbm4b9194.964ENSPPYG00000003012RBM410083.791Pongo_abelii
ENSMUSG00000033760Rbm4b9198.561ENSPCAG00000003393-10085.479Procavia_capensis
ENSMUSG00000033760Rbm4b10095.543ENSPCOG00000027885RBM4B9997.872Propithecus_coquereli
ENSMUSG00000033760Rbm4b9197.842ENSPVAG00000010486RBM410084.932Pteropus_vampyrus
ENSMUSG00000033760Rbm4b10096.100ENSPVAG00000010487RBM4B10096.100Pteropus_vampyrus
ENSMUSG00000033760Rbm4b10099.440ENSRNOG00000061795Rbm4b10099.440Rattus_norvegicus
ENSMUSG00000033760Rbm4b9497.203ENSRNOG00000050741Rbm410097.203Rattus_norvegicus
ENSMUSG00000033760Rbm4b10096.379ENSRBIG00000019394RBM4B9997.872Rhinopithecus_bieti
ENSMUSG00000033760Rbm4b10096.379ENSRROG00000032850RBM4B9997.872Rhinopithecus_roxellana
ENSMUSG00000033760Rbm4b9198.551ENSRROG00000032796-9098.592Rhinopithecus_roxellana
ENSMUSG00000033760Rbm4b10096.100ENSSBOG00000034474RBM4B9799.286Saimiri_boliviensis_boliviensis
ENSMUSG00000033760Rbm4b9198.561ENSSHAG00000008386-10087.151Sarcophilus_harrisii
ENSMUSG00000033760Rbm4b10094.134ENSSARG00000010710RBM4B10093.855Sorex_araneus
ENSMUSG00000033760Rbm4b9197.842ENSSSCG00000032437RBM410085.205Sus_scrofa
ENSMUSG00000033760Rbm4b9196.403ENSTGUG00000016779-9279.861Taeniopygia_guttata
ENSMUSG00000033760Rbm4b9197.619ENSTBEG00000003727-6894.393Tupaia_belangeri
ENSMUSG00000033760Rbm4b10096.078ENSTBEG00000003748RBM4B10096.078Tupaia_belangeri
ENSMUSG00000033760Rbm4b10096.379ENSTTRG00000011166RBM4B10096.379Tursiops_truncatus
ENSMUSG00000033760Rbm4b9197.842ENSTTRG00000011164RBM410084.658Tursiops_truncatus
ENSMUSG00000033760Rbm4b9495.804ENSUAMG00000014882RBM410095.804Ursus_americanus
ENSMUSG00000033760Rbm4b10096.379ENSUAMG00000004745RBM4B10096.379Ursus_americanus
ENSMUSG00000033760Rbm4b9496.503ENSUMAG00000011738-10096.503Ursus_maritimus
ENSMUSG00000033760Rbm4b10096.100ENSVPAG00000001950RBM4B10096.100Vicugna_pacos
ENSMUSG00000033760Rbm4b9197.842ENSVPAG00000001949RBM410084.932Vicugna_pacos
ENSMUSG00000033760Rbm4b10096.379ENSVVUG00000010619RBM4B10096.379Vulpes_vulpes
ENSMUSG00000033760Rbm4b9196.403ENSVVUG00000010622RBM410084.658Vulpes_vulpes
ENSMUSG00000033760Rbm4b9287.857ENSVVUG00000011717-9588.489Vulpes_vulpes
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000381regulation of alternative mRNA splicing, via spliceosome21873635.IBAProcess
GO:0003676nucleic acid binding-IEAFunction
GO:0003723RNA binding21873635.IBAFunction
GO:0005634nucleus21873635.IBAComponent
GO:0005654nucleoplasm-ISOComponent
GO:0005829cytosol-ISOComponent
GO:0006397mRNA processing-IEAProcess
GO:0006417regulation of translation17264215.IDAProcess
GO:0007623circadian rhythm17264215.IDAProcess
GO:0008270zinc ion binding-IEAFunction
GO:0008380RNA splicing-IEAProcess
GO:0010628positive regulation of gene expression17264215.IDAProcess
GO:0016607nuclear speck21873635.IBAComponent
GO:0032922circadian regulation of gene expression17264215.IDAProcess
GO:0032991protein-containing complex-ISOComponent
GO:0043153entrainment of circadian clock by photoperiod17264215.IDAProcess
GO:0045292mRNA cis splicing, via spliceosome21873635.IBAProcess
GO:0046872metal ion binding-IEAFunction

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