EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000033762 (Gene tree)
Gene ID: 79456
Gene Symbol: Recql4
Alias: -
Full Name: RecQ protein-like 4
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Minus strand
Length: 6996 bases
Position: chr15:76703553-76710548
Accession: 1931028
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000155694	zf-CCHC	PF00098.23	2.1e-05	1	1
ENSMUSP00000044363	zf-CCHC	PF00098.23	2.5e-05	1	1
ENSMUSP00000155694	DEAD	PF00270.29	2.6e-16	1	1
ENSMUSP00000044363	DEAD	PF00270.29	2.7e-16	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000229360	-	503	-	-	- (aa)	-	-
ENSMUST00000230724	-	3592	-	ENSMUSP00000154957	195 (aa)	-	A0A2R8W6H5
ENSMUST00000230544	-	3984	XM_017316804	ENSMUSP00000155694	1173 (aa)	XP_017172293	A0A2R8W710
ENSMUST00000036852	-	3896	XM_006521546	ENSMUSP00000044363	1216 (aa)	XP_006521609	A0A0R4J0J3

Gene Model

Click here to download ENSMUSG00000033762's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000033762's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000033762	Recql4	99	64.274	ENSG00000160957	RECQL4	99	73.611	Homo_sapiens
ENSMUSG00000033762	Recql4	99	39.882	ENSAPOG00000016945	recql4	99	40.510	Acanthochromis_polyacanthus
ENSMUSG00000033762	Recql4	98	62.920	ENSAMEG00000005460	RECQL4	99	62.920	Ailuropoda_melanoleuca
ENSMUSG00000033762	Recql4	80	54.348	ENSAOCG00000004254	recql4	71	50.365	Amphiprion_ocellaris
ENSMUSG00000033762	Recql4	89	44.709	ENSAPEG00000005709	recql4	99	40.405	Amphiprion_percula
ENSMUSG00000033762	Recql4	76	49.885	ENSATEG00000011464	recql4	95	56.599	Anabas_testudineus
ENSMUSG00000033762	Recql4	99	49.759	ENSACAG00000010589	RECQL4	99	49.839	Anolis_carolinensis
ENSMUSG00000033762	Recql4	100	62.969	ENSANAG00000024497	RECQL4	100	62.969	Aotus_nancymaae
ENSMUSG00000033762	Recql4	81	52.606	ENSACLG00000011982	recql4	71	49.419	Astatotilapia_calliptera
ENSMUSG00000033762	Recql4	65	55.316	ENSAMXG00000004768	recql4	71	55.482	Astyanax_mexicanus
ENSMUSG00000033762	Recql4	100	62.972	ENSCJAG00000021401	RECQL4	99	62.972	Callithrix_jacchus
ENSMUSG00000033762	Recql4	93	62.205	ENSCAFG00000001569	RECQL4	98	61.381	Canis_familiaris
ENSMUSG00000033762	Recql4	99	57.234	ENSCHIG00000011146	RECQL4	99	57.234	Capra_hircus
ENSMUSG00000033762	Recql4	78	66.951	ENSTSYG00000012090	RECQL4	99	70.721	Carlito_syrichta
ENSMUSG00000033762	Recql4	94	62.906	ENSCAPG00000017735	RECQL4	99	65.879	Cavia_aperea
ENSMUSG00000033762	Recql4	99	64.309	ENSCPOG00000015563	RECQL4	99	64.309	Cavia_porcellus
ENSMUSG00000033762	Recql4	100	63.483	ENSCCAG00000035749	RECQL4	100	63.483	Cebus_capucinus
ENSMUSG00000033762	Recql4	99	63.578	ENSCATG00000030745	RECQL4	99	63.040	Cercocebus_atys
ENSMUSG00000033762	Recql4	99	66.048	ENSCLAG00000013847	RECQL4	99	66.048	Chinchilla_lanigera
ENSMUSG00000033762	Recql4	99	63.070	ENSCSAG00000008275	RECQL4	99	63.070	Chlorocebus_sabaeus
ENSMUSG00000033762	Recql4	78	49.241	ENSCPBG00000019003	RECQL4	99	52.069	Chrysemys_picta_bellii
ENSMUSG00000033762	Recql4	99	60.684	ENSCANG00000043305	RECQL4	98	63.433	Colobus_angolensis_palliatus
ENSMUSG00000033762	Recql4	100	79.655	ENSCGRG00001015863	Recql4	100	79.984	Cricetulus_griseus_chok1gshd
ENSMUSG00000033762	Recql4	89	77.033	ENSCGRG00000013535	Recql4	100	80.905	Cricetulus_griseus_crigri
ENSMUSG00000033762	Recql4	67	53.350	ENSCSEG00000014814	recql4	90	56.950	Cynoglossus_semilaevis
ENSMUSG00000033762	Recql4	71	52.335	ENSCVAG00000007993	recql4	90	48.908	Cyprinodon_variegatus
ENSMUSG00000033762	Recql4	95	47.863	ENSDARG00000077516	recql4	89	48.102	Danio_rerio
ENSMUSG00000033762	Recql4	91	68.699	ENSDNOG00000002674	RECQL4	98	68.699	Dasypus_novemcinctus
ENSMUSG00000033762	Recql4	100	63.287	ENSDORG00000002297	Recql4	100	63.480	Dipodomys_ordii
ENSMUSG00000033762	Recql4	84	64.980	ENSETEG00000011107	RECQL4	86	66.071	Echinops_telfairi
ENSMUSG00000033762	Recql4	88	71.345	ENSECAG00000018665	RECQL4	99	69.101	Equus_caballus
ENSMUSG00000033762	Recql4	75	64.480	ENSEEUG00000005223	RECQL4	78	65.375	Erinaceus_europaeus
ENSMUSG00000033762	Recql4	88	53.734	ENSELUG00000022177	recql4	83	48.619	Esox_lucius
ENSMUSG00000033762	Recql4	100	65.495	ENSFDAG00000014917	RECQL4	100	65.495	Fukomys_damarensis
ENSMUSG00000033762	Recql4	83	44.156	ENSFHEG00000009855	recql4	89	40.357	Fundulus_heteroclitus
ENSMUSG00000033762	Recql4	99	42.165	ENSGMOG00000001340	recql4	99	42.999	Gadus_morhua
ENSMUSG00000033762	Recql4	88	50.000	ENSGALG00000042375	-	64	50.314	Gallus_gallus
ENSMUSG00000033762	Recql4	93	48.701	ENSGAFG00000009575	recql4	83	48.701	Gambusia_affinis
ENSMUSG00000033762	Recql4	82	48.801	ENSGACG00000015014	recql4	74	50.105	Gasterosteus_aculeatus
ENSMUSG00000033762	Recql4	88	52.748	ENSGAGG00000021941	RECQL4	80	52.854	Gopherus_agassizii
ENSMUSG00000033762	Recql4	99	63.498	ENSGGOG00000014319	RECQL4	99	68.764	Gorilla_gorilla
ENSMUSG00000033762	Recql4	81	52.932	ENSHBUG00000019085	recql4	71	49.419	Haplochromis_burtoni
ENSMUSG00000033762	Recql4	99	62.617	ENSHGLG00000015925	RECQL4	98	65.630	Heterocephalus_glaber_female
ENSMUSG00000033762	Recql4	98	62.821	ENSHGLG00100007626	RECQL4	99	65.873	Heterocephalus_glaber_male
ENSMUSG00000033762	Recql4	74	48.447	ENSHCOG00000016157	recql4	98	50.535	Hippocampus_comes
ENSMUSG00000033762	Recql4	99	47.929	ENSIPUG00000004473	recql4	92	48.182	Ictalurus_punctatus
ENSMUSG00000033762	Recql4	99	68.010	ENSJJAG00000017588	Recql4	100	68.092	Jaculus_jaculus
ENSMUSG00000033762	Recql4	99	41.057	ENSKMAG00000009537	recql4	99	40.964	Kryptolebias_marmoratus
ENSMUSG00000033762	Recql4	69	52.891	ENSLBEG00000015884	recql4	94	56.356	Labrus_bergylta
ENSMUSG00000033762	Recql4	91	49.387	ENSLACG00000004466	recql4	84	49.080	Latimeria_chalumnae
ENSMUSG00000033762	Recql4	88	50.993	ENSLOCG00000007478	recql4	86	50.993	Lepisosteus_oculatus
ENSMUSG00000033762	Recql4	99	60.735	ENSLAFG00000009512	RECQL4	99	63.208	Loxodonta_africana
ENSMUSG00000033762	Recql4	99	63.336	ENSMFAG00000038185	RECQL4	99	63.336	Macaca_fascicularis
ENSMUSG00000033762	Recql4	99	62.047	ENSMMUG00000015588	RECQL4	99	61.847	Macaca_mulatta
ENSMUSG00000033762	Recql4	99	63.336	ENSMNEG00000036079	RECQL4	99	62.800	Macaca_nemestrina
ENSMUSG00000033762	Recql4	99	61.236	ENSMLEG00000036034	RECQL4	99	69.852	Mandrillus_leucophaeus
ENSMUSG00000033762	Recql4	79	52.640	ENSMAMG00000015565	recql4	67	53.987	Mastacembelus_armatus
ENSMUSG00000033762	Recql4	66	52.679	ENSMZEG00005026699	recql4	94	56.267	Maylandia_zebra
ENSMUSG00000033762	Recql4	100	78.051	ENSMAUG00000008628	Recql4	100	78.378	Mesocricetus_auratus
ENSMUSG00000033762	Recql4	78	65.343	ENSMICG00000015923	RECQL4	100	69.048	Microcebus_murinus
ENSMUSG00000033762	Recql4	100	79.639	ENSMOCG00000009648	Recql4	100	79.639	Microtus_ochrogaster
ENSMUSG00000033762	Recql4	67	51.702	ENSMMOG00000018356	recql4	92	55.182	Mola_mola
ENSMUSG00000033762	Recql4	99	51.266	ENSMODG00000011014	RECQL4	99	50.939	Monodelphis_domestica
ENSMUSG00000033762	Recql4	67	53.342	ENSMALG00000007361	recql4	93	56.931	Monopterus_albus
ENSMUSG00000033762	Recql4	100	97.042	MGP_CAROLIEiJ_G0019945	Recql4	100	97.042	Mus_caroli
ENSMUSG00000033762	Recql4	100	93.919	MGP_PahariEiJ_G0019955	Recql4	100	93.919	Mus_pahari
ENSMUSG00000033762	Recql4	100	98.684	MGP_SPRETEiJ_G0020848	Recql4	100	98.684	Mus_spretus
ENSMUSG00000033762	Recql4	95	58.988	ENSMPUG00000006086	RECQL4	99	61.836	Mustela_putorius_furo
ENSMUSG00000033762	Recql4	100	63.290	ENSMLUG00000011295	RECQL4	100	63.371	Myotis_lucifugus
ENSMUSG00000033762	Recql4	100	75.596	ENSNGAG00000004346	Recql4	100	75.596	Nannospalax_galili
ENSMUSG00000033762	Recql4	87	69.430	ENSNLEG00000010900	RECQL4	90	68.974	Nomascus_leucogenys
ENSMUSG00000033762	Recql4	85	60.294	ENSMEUG00000001818	-	100	60.294	Notamacropus_eugenii
ENSMUSG00000033762	Recql4	83	65.169	ENSOPRG00000002588	RECQL4	84	65.955	Ochotona_princeps
ENSMUSG00000033762	Recql4	99	66.694	ENSODEG00000012082	RECQL4	99	66.694	Octodon_degus
ENSMUSG00000033762	Recql4	80	53.477	ENSONIG00000019801	recql4	84	45.150	Oreochromis_niloticus
ENSMUSG00000033762	Recql4	99	50.707	ENSOANG00000003526	RECQL4	99	52.936	Ornithorhynchus_anatinus
ENSMUSG00000033762	Recql4	83	48.283	ENSORLG00000024764	recql4	77	48.990	Oryzias_latipes
ENSMUSG00000033762	Recql4	72	52.778	ENSOMEG00000023534	recql4	87	55.712	Oryzias_melastigma
ENSMUSG00000033762	Recql4	100	59.855	ENSOGAG00000013008	RECQL4	100	59.855	Otolemur_garnettii
ENSMUSG00000033762	Recql4	91	57.429	ENSOARG00000012917	RECQL4	94	59.925	Ovis_aries
ENSMUSG00000033762	Recql4	99	61.111	ENSPPAG00000038772	RECQL4	94	63.830	Pan_paniscus
ENSMUSG00000033762	Recql4	99	64.228	ENSPTRG00000048119	RECQL4	99	69.274	Pan_troglodytes
ENSMUSG00000033762	Recql4	99	63.578	ENSPANG00000024705	RECQL4	99	63.578	Papio_anubis
ENSMUSG00000033762	Recql4	86	55.236	ENSPKIG00000020206	recql4	77	55.743	Paramormyrops_kingsleyae
ENSMUSG00000033762	Recql4	99	40.292	ENSPMGG00000021408	recql4	99	40.292	Periophthalmus_magnuspinnatus
ENSMUSG00000033762	Recql4	100	79.984	ENSPEMG00000008586	Recql4	100	79.984	Peromyscus_maniculatus_bairdii
ENSMUSG00000033762	Recql4	94	48.701	ENSPFOG00000005814	recql4	88	45.579	Poecilia_formosa
ENSMUSG00000033762	Recql4	94	48.875	ENSPLAG00000011704	recql4	83	48.875	Poecilia_latipinna
ENSMUSG00000033762	Recql4	94	48.875	ENSPMEG00000011683	recql4	83	48.875	Poecilia_mexicana
ENSMUSG00000033762	Recql4	74	48.328	ENSPREG00000012196	recql4	99	42.391	Poecilia_reticulata
ENSMUSG00000033762	Recql4	99	63.782	ENSPPYG00000018984	RECQL4	99	63.782	Pongo_abelii
ENSMUSG00000033762	Recql4	56	70.559	ENSPCAG00000014090	-	66	70.559	Procavia_capensis
ENSMUSG00000033762	Recql4	78	67.382	ENSPCOG00000013744	RECQL4	100	71.088	Propithecus_coquereli
ENSMUSG00000033762	Recql4	100	60.985	ENSPVAG00000006784	RECQL4	100	61.389	Pteropus_vampyrus
ENSMUSG00000033762	Recql4	66	52.679	ENSPNYG00000008927	recql4	94	56.267	Pundamilia_nyererei
ENSMUSG00000033762	Recql4	91	53.050	ENSPNAG00000005987	recql4	94	48.855	Pygocentrus_nattereri
ENSMUSG00000033762	Recql4	100	86.946	ENSRNOG00000032446	Recql4	100	86.946	Rattus_norvegicus
ENSMUSG00000033762	Recql4	99	58.498	ENSRROG00000040848	RECQL4	99	68.764	Rhinopithecus_roxellana
ENSMUSG00000033762	Recql4	99	61.167	ENSSBOG00000021445	RECQL4	99	64.157	Saimiri_boliviensis_boliviensis
ENSMUSG00000033762	Recql4	99	51.099	ENSSHAG00000010333	-	99	51.060	Sarcophilus_harrisii
ENSMUSG00000033762	Recql4	83	54.534	ENSSFOG00015010493	recql4	79	54.534	Scleropages_formosus
ENSMUSG00000033762	Recql4	67	52.411	ENSSMAG00000005002	recql4	89	55.962	Scophthalmus_maximus
ENSMUSG00000033762	Recql4	67	53.046	ENSSDUG00000013245	recql4	94	56.640	Seriola_dumerili
ENSMUSG00000033762	Recql4	67	53.257	ENSSLDG00000016407	recql4	94	56.889	Seriola_lalandi_dorsalis
ENSMUSG00000033762	Recql4	77	75.385	ENSSARG00000013351	-	88	75.385	Sorex_araneus
ENSMUSG00000033762	Recql4	79	46.786	ENSSPUG00000018087	RECQL4	99	49.498	Sphenodon_punctatus
ENSMUSG00000033762	Recql4	67	53.038	ENSSPAG00000006827	recql4	93	56.757	Stegastes_partitus
ENSMUSG00000033762	Recql4	94	65.849	ENSSSCG00000025736	RECQL4	100	66.462	Sus_scrofa
ENSMUSG00000033762	Recql4	72	52.529	ENSTRUG00000012749	recql4	88	53.113	Takifugu_rubripes
ENSMUSG00000033762	Recql4	96	44.386	ENSTNIG00000017539	recql4	88	44.560	Tetraodon_nigroviridis
ENSMUSG00000033762	Recql4	99	58.140	ENSUMAG00000019403	RECQL4	99	59.630	Ursus_maritimus
ENSMUSG00000033762	Recql4	85	46.091	ENSXETG00000016582	recql4	74	48.479	Xenopus_tropicalis
ENSMUSG00000033762	Recql4	68	52.956	ENSXCOG00000019857	recql4	92	56.430	Xiphophorus_couchianus
ENSMUSG00000033762	Recql4	90	40.065	ENSXMAG00000015315	recql4	91	56.667	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0000405	bubble DNA binding	21873635.	IBA	Function
GO:0000405	bubble DNA binding	-	ISO	Function
GO:0000723	telomere maintenance	-	ISO	Process
GO:0000724	double-strand break repair via homologous recombination	21873635.	IBA	Process
GO:0000733	DNA strand renaturation	-	ISO	Process
GO:0000781	chromosome, telomeric region	21873635.	IBA	Component
GO:0000781	chromosome, telomeric region	-	ISO	Component
GO:0001501	skeletal system development	16600186.	IMP	Process
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003677	DNA binding	21873635.	IBA	Function
GO:0003697	single-stranded DNA binding	21873635.	IBA	Function
GO:0004386	helicase activity	-	IEA	Function
GO:0005515	protein binding	21873635.	IBA	Function
GO:0005524	ATP binding	21873635.	IBA	Function
GO:0005524	ATP binding	-	ISO	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005694	chromosome	21873635.	IBA	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0006260	DNA replication	21873635.	IBA	Process
GO:0006260	DNA replication	-	ISO	Process
GO:0006281	DNA repair	21873635.	IBA	Process
GO:0006284	base-excision repair	21873635.	IBA	Process
GO:0006310	DNA recombination	21873635.	IBA	Process
GO:0008026	ATP-dependent helicase activity	-	IEA	Function
GO:0008270	zinc ion binding	-	IEA	Function
GO:0008284	positive regulation of cell proliferation	21873635.	IBA	Process
GO:0008284	positive regulation of cell proliferation	16600186.	IMP	Process
GO:0009378	four-way junction helicase activity	21873635.	IBA	Function
GO:0010971	positive regulation of G2/M transition of mitotic cell cycle	21873635.	IBA	Process
GO:0016787	hydrolase activity	-	IEA	Function
GO:0032357	oxidized purine DNA binding	21873635.	IBA	Function
GO:0032357	oxidized purine DNA binding	-	ISO	Function
GO:0032508	DNA duplex unwinding	21873635.	IBA	Process
GO:0032508	DNA duplex unwinding	-	ISO	Process
GO:0036310	annealing helicase activity	21873635.	IBA	Function
GO:0036310	annealing helicase activity	-	ISO	Function
GO:0043140	ATP-dependent 3'-5' DNA helicase activity	21873635.	IBA	Function
GO:0043140	ATP-dependent 3'-5' DNA helicase activity	-	ISO	Function
GO:0043473	pigmentation	15703196.	IMP	Process
GO:0045740	positive regulation of DNA replication	21873635.	IBA	Process
GO:0045875	negative regulation of sister chromatid cohesion	15703196.	IMP	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:0048705	skeletal system morphogenesis	15703196.	IMP	Process
GO:0061820	telomeric D-loop disassembly	21873635.	IBA	Process
GO:0061820	telomeric D-loop disassembly	-	ISO	Process
GO:0061821	telomeric D-loop binding	21873635.	IBA	Function
GO:0061821	telomeric D-loop binding	-	ISO	Function