EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000033882 (Gene tree)
Gene ID: 633285
Gene Symbol: Rbm46
Alias: ENSMUSG00000033882|LOC329687
Full Name: RNA binding motif protein 46
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 39256 bases
Position: chr3:82837228-82876483
Accession: 3645057
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000138728	DND1_DSRM	PF14709.7	2.4e-27	1	1
ENSMUSP00000138429	DND1_DSRM	PF14709.7	2.7e-27	1	1
ENSMUSP00000045511	DND1_DSRM	PF14709.7	3.3e-27	1	1
ENSMUSP00000138728	RRM_1	PF00076.22	1.1e-36	1	3
ENSMUSP00000138728	RRM_1	PF00076.22	1.1e-36	2	3
ENSMUSP00000138728	RRM_1	PF00076.22	1.1e-36	3	3
ENSMUSP00000138429	RRM_1	PF00076.22	1.3e-36	1	3
ENSMUSP00000138429	RRM_1	PF00076.22	1.3e-36	2	3
ENSMUSP00000138429	RRM_1	PF00076.22	1.3e-36	3	3
ENSMUSP00000045511	RRM_1	PF00076.22	1.9e-36	1	3
ENSMUSP00000045511	RRM_1	PF00076.22	1.9e-36	2	3
ENSMUSP00000045511	RRM_1	PF00076.22	1.9e-36	3	3

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000182818	-	2115	XM_017319680	ENSMUSP00000138429	485 (aa)	XP_017175169	S4R1Y9
ENSMUST00000048647	-	1794	XM_006501849	ENSMUSP00000045511	533 (aa)	XP_006501912	P86049
ENSMUST00000182637	-	2058	-	ENSMUSP00000138728	470 (aa)	-	S4R2P5

Gene Model

Click here to download ENSMUSG00000033882's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000033882's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000033882	Rbm46	52	30.000	ENSMUSG00000030846	Tial1	71	30.000
ENSMUSG00000033882	Rbm46	65	56.774	ENSMUSG00000066037	Hnrnpr	59	56.329
ENSMUSG00000033882	Rbm46	63	55.000	ENSMUSG00000032423	Syncrip	64	54.333
ENSMUSG00000033882	Rbm46	88	70.064	ENSMUSG00000052595	A1cf	96	70.064
ENSMUSG00000033882	Rbm46	66	72.468	ENSMUSG00000070780	Rbm47	94	73.649

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000033882	Rbm46	100	97.447	ENSG00000151962	RBM46	100	98.496	Homo_sapiens
ENSMUSG00000033882	Rbm46	99	66.034	ENSAPOG00000009209	rbm46	93	65.208	Acanthochromis_polyacanthus
ENSMUSG00000033882	Rbm46	100	97.373	ENSAMEG00000013290	RBM46	100	97.373	Ailuropoda_melanoleuca
ENSMUSG00000033882	Rbm46	98	60.981	ENSACIG00000014500	rbm46	91	60.377	Amphilophus_citrinellus
ENSMUSG00000033882	Rbm46	95	67.640	ENSAOCG00000001892	-	98	62.624	Amphiprion_ocellaris
ENSMUSG00000033882	Rbm46	95	67.640	ENSAPEG00000017762	rbm46	97	67.640	Amphiprion_percula
ENSMUSG00000033882	Rbm46	97	65.284	ENSATEG00000010775	rbm46	98	60.496	Anabas_testudineus
ENSMUSG00000033882	Rbm46	99	88.009	ENSAPLG00000005116	RBM46	100	88.009	Anas_platyrhynchos
ENSMUSG00000033882	Rbm46	99	90.578	ENSACAG00000015599	RBM46	100	88.931	Anolis_carolinensis
ENSMUSG00000033882	Rbm46	100	96.383	ENSANAG00000029193	RBM46	100	96.383	Aotus_nancymaae
ENSMUSG00000033882	Rbm46	95	65.419	ENSACLG00000016153	rbm46	94	60.073	Astatotilapia_calliptera
ENSMUSG00000033882	Rbm46	95	63.696	ENSAMXG00000020892	-	99	60.681	Astyanax_mexicanus
ENSMUSG00000033882	Rbm46	96	68.071	ENSAMXG00000009397	rbm46	98	68.071	Astyanax_mexicanus
ENSMUSG00000033882	Rbm46	100	97.320	ENSBTAG00000001696	RBM46	100	97.320	Bos_taurus
ENSMUSG00000033882	Rbm46	100	96.170	ENSCJAG00000001768	RBM46	100	96.170	Callithrix_jacchus
ENSMUSG00000033882	Rbm46	100	97.938	ENSCAFG00000008473	RBM46	100	97.938	Canis_familiaris
ENSMUSG00000033882	Rbm46	100	97.186	ENSCAFG00020002468	RBM46	100	97.186	Canis_lupus_dingo
ENSMUSG00000033882	Rbm46	100	96.907	ENSCHIG00000000502	RBM46	100	96.907	Capra_hircus
ENSMUSG00000033882	Rbm46	100	97.320	ENSTSYG00000010435	RBM46	100	97.320	Carlito_syrichta
ENSMUSG00000033882	Rbm46	79	92.141	ENSCAPG00000011841	-	99	92.141	Cavia_aperea
ENSMUSG00000033882	Rbm46	100	96.082	ENSCAPG00000011928	-	100	96.082	Cavia_aperea
ENSMUSG00000033882	Rbm46	99	93.966	ENSCPOG00000020396	-	95	94.105	Cavia_porcellus
ENSMUSG00000033882	Rbm46	100	96.082	ENSCPOG00000010284	-	100	96.082	Cavia_porcellus
ENSMUSG00000033882	Rbm46	99	92.291	ENSCPOG00000019272	-	100	91.264	Cavia_porcellus
ENSMUSG00000033882	Rbm46	99	80.962	ENSCCAG00000001323	-	99	80.842	Cebus_capucinus
ENSMUSG00000033882	Rbm46	100	97.234	ENSCCAG00000027619	-	100	97.234	Cebus_capucinus
ENSMUSG00000033882	Rbm46	100	97.234	ENSCATG00000040148	RBM46	100	97.234	Cercocebus_atys
ENSMUSG00000033882	Rbm46	99	94.218	ENSCLAG00000011886	-	99	90.541	Chinchilla_lanigera
ENSMUSG00000033882	Rbm46	100	95.532	ENSCLAG00000005846	-	100	95.532	Chinchilla_lanigera
ENSMUSG00000033882	Rbm46	100	96.435	ENSCSAG00000003263	RBM46	100	96.435	Chlorocebus_sabaeus
ENSMUSG00000033882	Rbm46	100	96.248	ENSCHOG00000003429	RBM46	100	96.248	Choloepus_hoffmanni
ENSMUSG00000033882	Rbm46	95	94.607	ENSCPBG00000009314	RBM46	97	94.607	Chrysemys_picta_bellii
ENSMUSG00000033882	Rbm46	100	97.113	ENSCANG00000039065	RBM46	100	97.113	Colobus_angolensis_palliatus
ENSMUSG00000033882	Rbm46	100	99.175	ENSCGRG00001016714	Rbm46	100	99.175	Cricetulus_griseus_chok1gshd
ENSMUSG00000033882	Rbm46	100	99.175	ENSCGRG00000011738	Rbm46	100	99.175	Cricetulus_griseus_crigri
ENSMUSG00000033882	Rbm46	98	58.672	ENSCSEG00000005530	rbm46	98	58.672	Cynoglossus_semilaevis
ENSMUSG00000033882	Rbm46	98	64.440	ENSCVAG00000021013	rbm46	97	63.866	Cyprinodon_variegatus
ENSMUSG00000033882	Rbm46	96	68.490	ENSDARG00000079452	rbm46	99	64.449	Danio_rerio
ENSMUSG00000033882	Rbm46	100	97.186	ENSDNOG00000016195	RBM46	100	97.186	Dasypus_novemcinctus
ENSMUSG00000033882	Rbm46	100	98.298	ENSDORG00000006405	Rbm46	100	98.298	Dipodomys_ordii
ENSMUSG00000033882	Rbm46	99	97.002	ENSETEG00000014902	RBM46	100	93.433	Echinops_telfairi
ENSMUSG00000033882	Rbm46	100	95.872	ENSEASG00005015821	RBM46	100	95.872	Equus_asinus_asinus
ENSMUSG00000033882	Rbm46	100	96.495	ENSECAG00000007649	RBM46	100	96.495	Equus_caballus
ENSMUSG00000033882	Rbm46	100	92.871	ENSEEUG00000011824	RBM46	100	92.871	Erinaceus_europaeus
ENSMUSG00000033882	Rbm46	81	70.942	ENSELUG00000008166	rbm46	98	69.309	Esox_lucius
ENSMUSG00000033882	Rbm46	100	97.732	ENSFCAG00000029812	RBM46	100	97.732	Felis_catus
ENSMUSG00000033882	Rbm46	99	86.354	ENSFALG00000013157	RBM46	95	84.265	Ficedula_albicollis
ENSMUSG00000033882	Rbm46	99	93.362	ENSFDAG00000019281	-	100	92.308	Fukomys_damarensis
ENSMUSG00000033882	Rbm46	99	92.077	ENSFDAG00000006445	-	95	91.841	Fukomys_damarensis
ENSMUSG00000033882	Rbm46	84	63.198	ENSFHEG00000013257	rbm46	93	60.900	Fundulus_heteroclitus
ENSMUSG00000033882	Rbm46	99	79.701	ENSGALG00000009278	RBM46	100	78.903	Gallus_gallus
ENSMUSG00000033882	Rbm46	83	81.533	ENSGAFG00000020245	rbm46	89	81.533	Gambusia_affinis
ENSMUSG00000033882	Rbm46	99	94.647	ENSGAGG00000002019	RBM46	95	90.180	Gopherus_agassizii
ENSMUSG00000033882	Rbm46	100	97.660	ENSGGOG00000001876	RBM46	100	97.660	Gorilla_gorilla
ENSMUSG00000033882	Rbm46	95	62.416	ENSHBUG00000009609	rbm46	91	67.143	Haplochromis_burtoni
ENSMUSG00000033882	Rbm46	94	82.955	ENSHGLG00000010742	-	99	75.763	Heterocephalus_glaber_female
ENSMUSG00000033882	Rbm46	99	78.801	ENSHGLG00000002940	-	100	77.947	Heterocephalus_glaber_female
ENSMUSG00000033882	Rbm46	100	87.216	ENSHGLG00000002463	-	99	93.764	Heterocephalus_glaber_female
ENSMUSG00000033882	Rbm46	100	94.021	ENSHGLG00100012752	-	100	94.021	Heterocephalus_glaber_male
ENSMUSG00000033882	Rbm46	94	82.955	ENSHGLG00100004977	-	99	75.763	Heterocephalus_glaber_male
ENSMUSG00000033882	Rbm46	99	75.000	ENSHGLG00100018987	-	99	74.286	Heterocephalus_glaber_male
ENSMUSG00000033882	Rbm46	98	51.261	ENSHCOG00000012998	rbm46	94	51.261	Hippocampus_comes
ENSMUSG00000033882	Rbm46	99	67.152	ENSIPUG00000024038	rbm46	96	67.155	Ictalurus_punctatus
ENSMUSG00000033882	Rbm46	100	98.298	ENSSTOG00000007918	RBM46	100	98.298	Ictidomys_tridecemlineatus
ENSMUSG00000033882	Rbm46	100	95.532	ENSJJAG00000003902	Rbm46	100	95.532	Jaculus_jaculus
ENSMUSG00000033882	Rbm46	99	64.271	ENSKMAG00000015127	rbm46	100	59.743	Kryptolebias_marmoratus
ENSMUSG00000033882	Rbm46	99	88.223	ENSLACG00000002062	RBM46	100	86.517	Latimeria_chalumnae
ENSMUSG00000033882	Rbm46	97	77.143	ENSLOCG00000008298	rbm46	97	77.483	Lepisosteus_oculatus
ENSMUSG00000033882	Rbm46	99	98.077	ENSLAFG00000015448	RBM46	100	98.077	Loxodonta_africana
ENSMUSG00000033882	Rbm46	100	97.660	ENSMFAG00000043485	RBM46	100	97.660	Macaca_fascicularis
ENSMUSG00000033882	Rbm46	100	97.526	ENSMMUG00000021147	RBM46	100	97.526	Macaca_mulatta
ENSMUSG00000033882	Rbm46	100	97.660	ENSMNEG00000002787	RBM46	100	97.660	Macaca_nemestrina
ENSMUSG00000033882	Rbm46	100	97.021	ENSMLEG00000029756	RBM46	100	97.021	Mandrillus_leucophaeus
ENSMUSG00000033882	Rbm46	95	67.184	ENSMAMG00000009093	rbm46	99	60.694	Mastacembelus_armatus
ENSMUSG00000033882	Rbm46	95	65.924	ENSMZEG00005027849	rbm46	97	63.617	Maylandia_zebra
ENSMUSG00000033882	Rbm46	99	80.342	ENSMGAG00000001457	RBM46	99	80.342	Meleagris_gallopavo
ENSMUSG00000033882	Rbm46	100	98.969	ENSMAUG00000009911	Rbm46	100	98.969	Mesocricetus_auratus
ENSMUSG00000033882	Rbm46	100	97.872	ENSMICG00000042747	RBM46	100	97.872	Microcebus_murinus
ENSMUSG00000033882	Rbm46	100	98.557	ENSMOCG00000001188	Rbm46	100	98.557	Microtus_ochrogaster
ENSMUSG00000033882	Rbm46	96	64.488	ENSMMOG00000011214	rbm46	97	59.810	Mola_mola
ENSMUSG00000033882	Rbm46	99	97.645	ENSMODG00000001302	RBM46	100	88.508	Monodelphis_domestica
ENSMUSG00000033882	Rbm46	94	63.575	ENSMALG00000006185	rbm46	93	63.801	Monopterus_albus
ENSMUSG00000033882	Rbm46	100	99.588	MGP_CAROLIEiJ_G0025101	Rbm46	100	99.588	Mus_caroli
ENSMUSG00000033882	Rbm46	100	98.557	MGP_PahariEiJ_G0026544	Rbm46	100	98.557	Mus_pahari
ENSMUSG00000033882	Rbm46	100	99.812	MGP_SPRETEiJ_G0026043	Rbm46	100	99.812	Mus_spretus
ENSMUSG00000033882	Rbm46	100	98.144	ENSMPUG00000005670	RBM46	100	98.144	Mustela_putorius_furo
ENSMUSG00000033882	Rbm46	100	96.442	ENSMLUG00000003221	RBM46	100	96.442	Myotis_lucifugus
ENSMUSG00000033882	Rbm46	100	97.938	ENSNGAG00000004231	Rbm46	100	97.938	Nannospalax_galili
ENSMUSG00000033882	Rbm46	95	66.219	ENSNBRG00000000273	rbm46	84	66.219	Neolamprologus_brichardi
ENSMUSG00000033882	Rbm46	100	97.447	ENSNLEG00000006184	RBM46	100	97.447	Nomascus_leucogenys
ENSMUSG00000033882	Rbm46	89	97.596	ENSMEUG00000013328	RBM46	100	97.596	Notamacropus_eugenii
ENSMUSG00000033882	Rbm46	60	97.880	ENSOPRG00000007136	RBM46	100	97.880	Ochotona_princeps
ENSMUSG00000033882	Rbm46	99	94.004	ENSODEG00000018002	-	93	93.933	Octodon_degus
ENSMUSG00000033882	Rbm46	100	94.468	ENSODEG00000000735	-	100	94.468	Octodon_degus
ENSMUSG00000033882	Rbm46	95	67.184	ENSONIG00000014096	rbm46	99	65.665	Oreochromis_niloticus
ENSMUSG00000033882	Rbm46	99	90.598	ENSOANG00000002141	RBM46	100	88.066	Ornithorhynchus_anatinus
ENSMUSG00000033882	Rbm46	100	97.561	ENSOCUG00000017859	RBM46	100	97.561	Oryctolagus_cuniculus
ENSMUSG00000033882	Rbm46	99	62.553	ENSORLG00000002429	rbm46	97	58.456	Oryzias_latipes
ENSMUSG00000033882	Rbm46	99	62.845	ENSORLG00020022154	rbm46	97	58.684	Oryzias_latipes_hni
ENSMUSG00000033882	Rbm46	99	63.002	ENSORLG00015020234	rbm46	97	62.346	Oryzias_latipes_hsok
ENSMUSG00000033882	Rbm46	95	62.914	ENSOMEG00000022580	rbm46	99	58.902	Oryzias_melastigma
ENSMUSG00000033882	Rbm46	100	97.561	ENSOGAG00000005647	RBM46	100	97.561	Otolemur_garnettii
ENSMUSG00000033882	Rbm46	100	97.526	ENSOARG00000016406	RBM46	100	97.526	Ovis_aries
ENSMUSG00000033882	Rbm46	100	97.660	ENSPPAG00000043236	RBM46	100	97.660	Pan_paniscus
ENSMUSG00000033882	Rbm46	100	97.526	ENSPPRG00000009416	RBM46	100	97.526	Panthera_pardus
ENSMUSG00000033882	Rbm46	100	97.526	ENSPTIG00000017449	RBM46	100	97.526	Panthera_tigris_altaica
ENSMUSG00000033882	Rbm46	100	97.660	ENSPTRG00000016538	RBM46	100	97.660	Pan_troglodytes
ENSMUSG00000033882	Rbm46	100	97.660	ENSPANG00000004186	RBM46	100	97.660	Papio_anubis
ENSMUSG00000033882	Rbm46	99	70.815	ENSPKIG00000015334	rbm46	92	67.293	Paramormyrops_kingsleyae
ENSMUSG00000033882	Rbm46	100	94.894	ENSPSIG00000006429	RBM46	96	94.894	Pelodiscus_sinensis
ENSMUSG00000033882	Rbm46	95	82.772	ENSPMGG00000019872	rbm46	94	82.772	Periophthalmus_magnuspinnatus
ENSMUSG00000033882	Rbm46	100	99.175	ENSPEMG00000013899	Rbm46	100	99.175	Peromyscus_maniculatus_bairdii
ENSMUSG00000033882	Rbm46	100	97.320	ENSPCIG00000029626	RBM46	100	97.320	Phascolarctos_cinereus
ENSMUSG00000033882	Rbm46	96	80.000	ENSPFOG00000001079	rbm46	95	80.000	Poecilia_formosa
ENSMUSG00000033882	Rbm46	99	63.732	ENSPLAG00000004541	rbm46	98	58.111	Poecilia_latipinna
ENSMUSG00000033882	Rbm46	97	65.859	ENSPMEG00000015724	rbm46	92	65.859	Poecilia_mexicana
ENSMUSG00000033882	Rbm46	96	66.960	ENSPREG00000014464	rbm46	98	65.605	Poecilia_reticulata
ENSMUSG00000033882	Rbm46	100	96.435	ENSPPYG00000015144	RBM46	100	96.435	Pongo_abelii
ENSMUSG00000033882	Rbm46	99	91.006	ENSPCAG00000003110	RBM46	99	89.286	Procavia_capensis
ENSMUSG00000033882	Rbm46	100	97.021	ENSPCOG00000024347	RBM46	100	97.021	Propithecus_coquereli
ENSMUSG00000033882	Rbm46	100	97.186	ENSPVAG00000008376	RBM46	100	97.186	Pteropus_vampyrus
ENSMUSG00000033882	Rbm46	95	69.048	ENSPNAG00000025312	rbm46	99	64.112	Pygocentrus_nattereri
ENSMUSG00000033882	Rbm46	100	98.687	ENSRNOG00000025823	Rbm46	100	98.687	Rattus_norvegicus
ENSMUSG00000033882	Rbm46	100	96.383	ENSRBIG00000032583	RBM46	100	96.383	Rhinopithecus_bieti
ENSMUSG00000033882	Rbm46	100	96.596	ENSRROG00000044288	RBM46	100	96.596	Rhinopithecus_roxellana
ENSMUSG00000033882	Rbm46	100	97.021	ENSSBOG00000033028	RBM46	100	97.021	Saimiri_boliviensis_boliviensis
ENSMUSG00000033882	Rbm46	100	96.811	ENSSHAG00000012596	RBM46	100	96.811	Sarcophilus_harrisii
ENSMUSG00000033882	Rbm46	98	72.609	ENSSFOG00015000087	rbm46	98	68.113	Scleropages_formosus
ENSMUSG00000033882	Rbm46	99	62.661	ENSSMAG00000017042	rbm46	97	62.661	Scophthalmus_maximus
ENSMUSG00000033882	Rbm46	97	67.538	ENSSDUG00000020645	rbm46	89	67.538	Seriola_dumerili
ENSMUSG00000033882	Rbm46	100	96.998	ENSSARG00000006520	RBM46	100	96.998	Sorex_araneus
ENSMUSG00000033882	Rbm46	99	94.004	ENSSPUG00000012525	-	100	91.978	Sphenodon_punctatus
ENSMUSG00000033882	Rbm46	99	92.521	ENSSPUG00000004773	-	98	92.521	Sphenodon_punctatus
ENSMUSG00000033882	Rbm46	96	63.797	ENSSPAG00000013697	rbm46	97	62.741	Stegastes_partitus
ENSMUSG00000033882	Rbm46	100	97.526	ENSSSCG00000008994	RBM46	100	97.526	Sus_scrofa
ENSMUSG00000033882	Rbm46	99	84.797	ENSTGUG00000005307	RBM46	100	84.797	Taeniopygia_guttata
ENSMUSG00000033882	Rbm46	97	64.693	ENSTRUG00000004237	rbm46	91	64.693	Takifugu_rubripes
ENSMUSG00000033882	Rbm46	97	63.043	ENSTNIG00000008714	rbm46	95	58.175	Tetraodon_nigroviridis
ENSMUSG00000033882	Rbm46	99	95.075	ENSTBEG00000013949	RBM46	100	93.433	Tupaia_belangeri
ENSMUSG00000033882	Rbm46	99	96.574	ENSTTRG00000001239	RBM46	100	95.497	Tursiops_truncatus
ENSMUSG00000033882	Rbm46	100	98.144	ENSUAMG00000026593	RBM46	100	98.144	Ursus_americanus
ENSMUSG00000033882	Rbm46	100	97.938	ENSUMAG00000016442	RBM46	100	97.938	Ursus_maritimus
ENSMUSG00000033882	Rbm46	100	98.144	ENSVVUG00000024957	RBM46	100	98.144	Vulpes_vulpes
ENSMUSG00000033882	Rbm46	79	72.087	ENSXETG00000032067	-	100	71.545	Xenopus_tropicalis
ENSMUSG00000033882	Rbm46	100	56.506	ENSXETG00000032344	-	100	56.506	Xenopus_tropicalis
ENSMUSG00000033882	Rbm46	99	77.730	ENSXETG00000022412	-	99	74.296	Xenopus_tropicalis
ENSMUSG00000033882	Rbm46	95	65.652	ENSXMAG00000008237	rbm46	90	65.652	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001829	trophectodermal cell differentiation	25397698.	IMP	Process
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0003723	RNA binding	25397698.	IDA	Function
GO:0003729	mRNA binding	21873635.	IBA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	25397698.	IDA	Component
GO:0048255	mRNA stabilization	25397698.	IDA	Process