EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000033931 (Gene tree)
Gene ID: 52202
Gene Symbol: Rbm34
Alias: 4930547K05Rik|D8Ertd233e
Full Name: RNA binding motif protein 34
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Minus strand
Length: 23900 bases
Position: chr8:126947172-126971071
Accession: 1098653
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000048450	RRM_1	PF00076.22	1.5e-28	1	2
ENSMUSP00000048450	RRM_1	PF00076.22	1.5e-28	2	2
ENSMUSP00000148473	RRM_1	PF00076.22	8.8e-21	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000212583	-	2165	-	-	- (aa)	-	-
ENSMUST00000045994	-	3424	-	ENSMUSP00000048450	442 (aa)	-	B2RUP0
ENSMUST00000212618	-	1509	XM_006531182	ENSMUSP00000148473	422 (aa)	XP_006531245	A0A1D5RLR3

Gene Model

Click here to download ENSMUSG00000033931's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000033931's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000033931	Rbm34	100	68.539	ENSG00000188739	RBM34	95	68.160	Homo_sapiens
ENSMUSG00000033931	Rbm34	79	45.845	ENSAPOG00000004027	rbm34	81	44.915	Acanthochromis_polyacanthus
ENSMUSG00000033931	Rbm34	60	43.609	ENSACIG00000014842	rbm34	73	38.122	Amphilophus_citrinellus
ENSMUSG00000033931	Rbm34	79	45.143	ENSAOCG00000006146	rbm34	78	44.886	Amphiprion_ocellaris
ENSMUSG00000033931	Rbm34	79	45.714	ENSAPEG00000022105	rbm34	76	44.602	Amphiprion_percula
ENSMUSG00000033931	Rbm34	82	45.205	ENSATEG00000016567	rbm34	82	43.132	Anabas_testudineus
ENSMUSG00000033931	Rbm34	73	55.623	ENSAPLG00000004344	RBM34	96	54.969	Anas_platyrhynchos
ENSMUSG00000033931	Rbm34	92	47.304	ENSACAG00000001253	RBM34	95	46.445	Anolis_carolinensis
ENSMUSG00000033931	Rbm34	100	67.457	ENSANAG00000029971	RBM34	95	66.892	Aotus_nancymaae
ENSMUSG00000033931	Rbm34	78	43.228	ENSACLG00000026337	rbm34	78	43.228	Astatotilapia_calliptera
ENSMUSG00000033931	Rbm34	78	43.228	ENSACLG00000018471	rbm34	68	43.228	Astatotilapia_calliptera
ENSMUSG00000033931	Rbm34	80	44.789	ENSAMXG00000021328	rbm34	77	44.568	Astyanax_mexicanus
ENSMUSG00000033931	Rbm34	100	69.663	ENSCJAG00000018125	RBM34	95	69.412	Callithrix_jacchus
ENSMUSG00000033931	Rbm34	89	70.886	ENSCAFG00000011507	RBM34	98	65.230	Canis_familiaris
ENSMUSG00000033931	Rbm34	89	72.475	ENSTSYG00000009942	RBM34	95	68.852	Carlito_syrichta
ENSMUSG00000033931	Rbm34	79	63.506	ENSCAPG00000015346	RBM34	93	62.069	Cavia_aperea
ENSMUSG00000033931	Rbm34	95	66.824	ENSCPOG00000015213	RBM34	94	65.802	Cavia_porcellus
ENSMUSG00000033931	Rbm34	100	68.667	ENSCCAG00000025584	RBM34	95	68.140	Cebus_capucinus
ENSMUSG00000033931	Rbm34	95	70.118	ENSCATG00000031771	RBM34	96	69.412	Cercocebus_atys
ENSMUSG00000033931	Rbm34	95	66.430	ENSCLAG00000003464	RBM34	95	67.062	Chinchilla_lanigera
ENSMUSG00000033931	Rbm34	100	69.663	ENSCSAG00000010079	RBM34	95	69.340	Chlorocebus_sabaeus
ENSMUSG00000033931	Rbm34	91	51.220	ENSCPBG00000005460	RBM34	85	49.758	Chrysemys_picta_bellii
ENSMUSG00000033931	Rbm34	98	69.635	ENSCANG00000009561	RBM34	93	69.544	Colobus_angolensis_palliatus
ENSMUSG00000033931	Rbm34	95	73.020	ENSCGRG00001018721	Rbm34	99	82.927	Cricetulus_griseus_chok1gshd
ENSMUSG00000033931	Rbm34	95	79.208	ENSCGRG00000014051	Rbm34	95	78.164	Cricetulus_griseus_crigri
ENSMUSG00000033931	Rbm34	78	41.092	ENSCSEG00000000993	rbm34	77	42.857	Cynoglossus_semilaevis
ENSMUSG00000033931	Rbm34	88	41.772	ENSCVAG00000018699	rbm34	90	41.071	Cyprinodon_variegatus
ENSMUSG00000033931	Rbm34	58	50.000	ENSDARG00000101877	rbm34	96	41.987	Danio_rerio
ENSMUSG00000033931	Rbm34	93	70.264	ENSDNOG00000044740	RBM34	95	65.967	Dasypus_novemcinctus
ENSMUSG00000033931	Rbm34	72	74.295	ENSDORG00000006420	Rbm34	99	73.981	Dipodomys_ordii
ENSMUSG00000033931	Rbm34	90	75.568	ENSEEUG00000012760	RBM34	80	77.419	Erinaceus_europaeus
ENSMUSG00000033931	Rbm34	76	44.315	ENSELUG00000015682	rbm34	75	43.443	Esox_lucius
ENSMUSG00000033931	Rbm34	97	71.065	ENSFCAG00000001852	RBM34	94	70.238	Felis_catus
ENSMUSG00000033931	Rbm34	71	40.575	ENSFHEG00000010140	rbm34	98	39.873	Fundulus_heteroclitus
ENSMUSG00000033931	Rbm34	50	44.493	ENSGMOG00000011683	rbm34	83	44.934	Gadus_morhua
ENSMUSG00000033931	Rbm34	54	47.699	ENSGALG00000029915	RBM34	77	47.737	Gallus_gallus
ENSMUSG00000033931	Rbm34	80	43.923	ENSGAFG00000017798	rbm34	81	42.896	Gambusia_affinis
ENSMUSG00000033931	Rbm34	77	42.941	ENSGACG00000001040	-	75	41.520	Gasterosteus_aculeatus
ENSMUSG00000033931	Rbm34	94	49.655	ENSGAGG00000020598	RBM34	93	49.763	Gopherus_agassizii
ENSMUSG00000033931	Rbm34	100	68.989	ENSGGOG00000007924	RBM34	95	68.632	Gorilla_gorilla
ENSMUSG00000033931	Rbm34	78	43.804	ENSHBUG00000015508	rbm34	78	42.939	Haplochromis_burtoni
ENSMUSG00000033931	Rbm34	95	68.868	ENSHGLG00000016495	RBM34	95	67.689	Heterocephalus_glaber_female
ENSMUSG00000033931	Rbm34	95	68.868	ENSHGLG00100014678	RBM34	95	67.689	Heterocephalus_glaber_male
ENSMUSG00000033931	Rbm34	75	45.509	ENSIPUG00000021952	rbm34	74	46.286	Ictalurus_punctatus
ENSMUSG00000033931	Rbm34	100	68.456	ENSSTOG00000002792	RBM34	100	63.758	Ictidomys_tridecemlineatus
ENSMUSG00000033931	Rbm34	72	74.062	ENSJJAG00000021295	Rbm34	93	74.074	Jaculus_jaculus
ENSMUSG00000033931	Rbm34	80	44.633	ENSKMAG00000007790	rbm34	80	44.350	Kryptolebias_marmoratus
ENSMUSG00000033931	Rbm34	83	42.818	ENSLBEG00000022530	-	83	43.360	Labrus_bergylta
ENSMUSG00000033931	Rbm34	57	41.339	ENSLBEG00000028305	rbm34	51	45.178	Labrus_bergylta
ENSMUSG00000033931	Rbm34	88	45.939	ENSLACG00000013628	RBM34	88	45.939	Latimeria_chalumnae
ENSMUSG00000033931	Rbm34	78	48.433	ENSLOCG00000015902	rbm34	75	47.399	Lepisosteus_oculatus
ENSMUSG00000033931	Rbm34	100	68.653	ENSLAFG00000014289	RBM34	95	68.213	Loxodonta_africana
ENSMUSG00000033931	Rbm34	95	69.762	ENSMFAG00000038522	RBM34	95	69.048	Macaca_fascicularis
ENSMUSG00000033931	Rbm34	95	69.668	ENSMMUG00000039424	RBM34	99	68.957	Macaca_mulatta
ENSMUSG00000033931	Rbm34	95	69.811	ENSMNEG00000040149	RBM34	96	69.104	Macaca_nemestrina
ENSMUSG00000033931	Rbm34	78	44.092	ENSMAMG00000018828	rbm34	78	43.516	Mastacembelus_armatus
ENSMUSG00000033931	Rbm34	78	43.228	ENSMZEG00005021586	rbm34	78	43.228	Maylandia_zebra
ENSMUSG00000033931	Rbm34	92	50.000	ENSMGAG00000011921	RBM34	94	50.505	Meleagris_gallopavo
ENSMUSG00000033931	Rbm34	99	66.742	ENSMICG00000038704	-	95	65.721	Microcebus_murinus
ENSMUSG00000033931	Rbm34	95	79.335	ENSMOCG00000013550	Rbm34	95	78.385	Microtus_ochrogaster
ENSMUSG00000033931	Rbm34	79	40.974	ENSMMOG00000018675	rbm34	81	40.503	Mola_mola
ENSMUSG00000033931	Rbm34	92	55.097	ENSMODG00000008436	RBM34	94	52.941	Monodelphis_domestica
ENSMUSG00000033931	Rbm34	81	44.231	ENSMALG00000007816	rbm34	92	40.409	Monopterus_albus
ENSMUSG00000033931	Rbm34	100	95.023	MGP_CAROLIEiJ_G0031732	Rbm34	100	95.023	Mus_caroli
ENSMUSG00000033931	Rbm34	95	91.706	MGP_PahariEiJ_G0023329	Rbm34	100	91.176	Mus_pahari
ENSMUSG00000033931	Rbm34	100	98.869	MGP_SPRETEiJ_G0032849	Rbm34	100	98.869	Mus_spretus
ENSMUSG00000033931	Rbm34	95	65.493	ENSMPUG00000002849	RBM34	95	65.176	Mustela_putorius_furo
ENSMUSG00000033931	Rbm34	96	68.807	ENSMLUG00000016224	RBM34	90	68.434	Myotis_lucifugus
ENSMUSG00000033931	Rbm34	100	71.106	ENSNGAG00000010712	Rbm34	95	71.564	Nannospalax_galili
ENSMUSG00000033931	Rbm34	79	42.000	ENSNBRG00000010975	rbm34	78	42.000	Neolamprologus_brichardi
ENSMUSG00000033931	Rbm34	100	69.058	ENSNLEG00000002610	RBM34	95	68.706	Nomascus_leucogenys
ENSMUSG00000033931	Rbm34	67	58.140	ENSMEUG00000005465	-	93	56.811	Notamacropus_eugenii
ENSMUSG00000033931	Rbm34	100	54.222	ENSOPRG00000013930	RBM34	95	55.059	Ochotona_princeps
ENSMUSG00000033931	Rbm34	89	68.687	ENSODEG00000006130	RBM34	99	68.687	Octodon_degus
ENSMUSG00000033931	Rbm34	83	41.892	ENSONIG00000018121	rbm34	80	42.162	Oreochromis_niloticus
ENSMUSG00000033931	Rbm34	89	55.138	ENSOANG00000001206	RBM34	92	53.207	Ornithorhynchus_anatinus
ENSMUSG00000033931	Rbm34	100	67.556	ENSOCUG00000009173	RBM34	95	67.599	Oryctolagus_cuniculus
ENSMUSG00000033931	Rbm34	81	44.011	ENSORLG00000001221	rbm34	88	41.282	Oryzias_latipes
ENSMUSG00000033931	Rbm34	83	43.360	ENSORLG00020016678	rbm34	90	40.750	Oryzias_latipes_hni
ENSMUSG00000033931	Rbm34	83	43.360	ENSORLG00015016039	rbm34	90	41.895	Oryzias_latipes_hsok
ENSMUSG00000033931	Rbm34	83	43.164	ENSOMEG00000007902	rbm34	84	43.396	Oryzias_melastigma
ENSMUSG00000033931	Rbm34	99	65.333	ENSOGAG00000012470	RBM34	95	64.665	Otolemur_garnettii
ENSMUSG00000033931	Rbm34	100	65.247	ENSPPAG00000030692	RBM34	100	64.574	Pan_paniscus
ENSMUSG00000033931	Rbm34	93	71.671	ENSPPRG00000013597	RBM34	93	70.983	Panthera_pardus
ENSMUSG00000033931	Rbm34	97	71.528	ENSPTIG00000011612	RBM34	94	71.021	Panthera_tigris_altaica
ENSMUSG00000033931	Rbm34	100	69.283	ENSPTRG00000048646	-	100	68.610	Pan_troglodytes
ENSMUSG00000033931	Rbm34	100	69.283	ENSPTRG00000032432	RBM34	100	68.610	Pan_troglodytes
ENSMUSG00000033931	Rbm34	95	70.353	ENSPANG00000010411	RBM34	95	69.647	Papio_anubis
ENSMUSG00000033931	Rbm34	88	44.938	ENSPKIG00000009284	rbm34	94	42.993	Paramormyrops_kingsleyae
ENSMUSG00000033931	Rbm34	94	49.524	ENSPSIG00000011370	RBM34	90	50.243	Pelodiscus_sinensis
ENSMUSG00000033931	Rbm34	60	43.284	ENSPMGG00000001183	rbm34	60	47.907	Periophthalmus_magnuspinnatus
ENSMUSG00000033931	Rbm34	95	84.834	ENSPEMG00000000265	Rbm34	95	83.610	Peromyscus_maniculatus_bairdii
ENSMUSG00000033931	Rbm34	60	45.126	ENSPMAG00000001602	rbm34	78	44.178	Petromyzon_marinus
ENSMUSG00000033931	Rbm34	95	55.478	ENSPCIG00000029736	-	75	56.328	Phascolarctos_cinereus
ENSMUSG00000033931	Rbm34	81	42.737	ENSPFOG00000009829	-	92	41.000	Poecilia_formosa
ENSMUSG00000033931	Rbm34	81	42.458	ENSPLAG00000018385	-	81	42.458	Poecilia_latipinna
ENSMUSG00000033931	Rbm34	81	37.709	ENSPMEG00000014440	-	67	46.341	Poecilia_mexicana
ENSMUSG00000033931	Rbm34	81	42.061	ENSPREG00000023227	rbm34	82	41.783	Poecilia_reticulata
ENSMUSG00000033931	Rbm34	100	69.265	ENSPPYG00000029513	RBM34	95	68.458	Pongo_abelii
ENSMUSG00000033931	Rbm34	97	68.065	ENSPCOG00000018448	RBM34	95	65.566	Propithecus_coquereli
ENSMUSG00000033931	Rbm34	95	70.423	ENSPVAG00000015158	RBM34	95	71.770	Pteropus_vampyrus
ENSMUSG00000033931	Rbm34	78	43.228	ENSPNYG00000004970	rbm34	78	43.228	Pundamilia_nyererei
ENSMUSG00000033931	Rbm34	78	42.936	ENSPNAG00000002639	rbm34	77	45.378	Pygocentrus_nattereri
ENSMUSG00000033931	Rbm34	95	87.204	ENSRNOG00000020004	Rbm34	95	85.986	Rattus_norvegicus
ENSMUSG00000033931	Rbm34	100	69.888	ENSRBIG00000032900	RBM34	95	69.575	Rhinopithecus_bieti
ENSMUSG00000033931	Rbm34	100	69.888	ENSRROG00000039131	RBM34	95	69.575	Rhinopithecus_roxellana
ENSMUSG00000033931	Rbm34	89	54.386	ENSSHAG00000015812	RBM34	89	55.250	Sarcophilus_harrisii
ENSMUSG00000033931	Rbm34	76	47.647	ENSSFOG00015000148	rbm34	76	46.939	Scleropages_formosus
ENSMUSG00000033931	Rbm34	79	43.220	ENSSMAG00000020955	rbm34	78	43.220	Scophthalmus_maximus
ENSMUSG00000033931	Rbm34	79	41.370	ENSSDUG00000019237	rbm34	79	41.972	Seriola_dumerili
ENSMUSG00000033931	Rbm34	79	42.017	ENSSLDG00000000796	rbm34	89	38.947	Seriola_lalandi_dorsalis
ENSMUSG00000033931	Rbm34	94	49.412	ENSSPUG00000015430	RBM34	90	50.000	Sphenodon_punctatus
ENSMUSG00000033931	Rbm34	78	43.678	ENSSPAG00000010174	rbm34	78	43.678	Stegastes_partitus
ENSMUSG00000033931	Rbm34	77	42.647	ENSTRUG00000011172	rbm34	81	42.197	Takifugu_rubripes
ENSMUSG00000033931	Rbm34	78	39.886	ENSTNIG00000001302	-	92	39.489	Tetraodon_nigroviridis
ENSMUSG00000033931	Rbm34	81	45.753	ENSXETG00000023721	rbm34	81	45.404	Xenopus_tropicalis
ENSMUSG00000033931	Rbm34	81	37.778	ENSXCOG00000011190	RBM34	82	38.663	Xiphophorus_couchianus
ENSMUSG00000033931	Rbm34	80	42.897	ENSXMAG00000029852	rbm34	81	42.500	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0008150	biological_process	-	ND	Process