EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000033970 (Gene tree)
Gene ID: 69263
Gene Symbol: Rfc3
Alias: 2810416I22Rik|38kDa|Recc3
Full Name: replication factor C (activator 1) 3
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 8487
Position: chr5: 151642756-151651242
Accession: 1916513
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000156667	-	503	-	-	- (aa)	-	-
ENSMUST00000136752	-	605	-	-	- (aa)	-	-
ENSMUST00000140067	-	1062	-	-	- (aa)	-	-
ENSMUST00000038131	-	1317	-	ENSMUSP00000039621	356 (aa)	-	Q8R323
ENSMUST00000127366	-	706	-	-	- (aa)	-	-
ENSMUST00000132709	-	906	-	-	- (aa)	-	-
ENSMUST00000145106	-	2726	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000033970's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03030	DNA replication	KEGG
mmu03420	Nucleotide excision repair	KEGG
mmu03430	Mismatch repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000033970's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000033970	Rfc3	100	97.191	ENSG00000133119	RFC3	100	97.191	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003677	DNA binding	-	ISO	Function
GO:0003689	DNA clamp loader activity	21873635.	IBA	Function
GO:0003689	DNA clamp loader activity	-	ISO	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005663	DNA replication factor C complex	21873635.	IBA	Component
GO:0005663	DNA replication factor C complex	-	ISO	Component
GO:0006260	DNA replication	-	ISO	Process
GO:0006261	DNA-dependent DNA replication	21873635.	IBA	Process
GO:0016887	ATPase activity	-	ISO	Function
GO:0031390	Ctf18 RFC-like complex	-	ISO	Component
GO:0043142	single-stranded DNA-dependent ATPase activity	-	ISO	Function
GO:1900264	positive regulation of DNA-directed DNA polymerase activity	-	ISO	Process