EuRBPDB

Description

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	RBDmap & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000218719	-	538	-	ENSMUSP00000151890	85 (aa)	-	A0A1W2P828
ENSMUST00000219690	-	569	-	ENSMUSP00000152005	115 (aa)	-	A0A1W2P8B6
ENSMUST00000219573	-	637	-	ENSMUSP00000151306	181 (aa)	-	A0A1W2P6Q3
ENSMUST00000047672	-	1959	XM_006513161	ENSMUSP00000036288	535 (aa)	XP_006513224	P80314
ENSMUST00000218502	-	615	-	-	- (aa)	-	-
ENSMUST00000219036	-	864	-	ENSMUSP00000151587	217 (aa)	-	A0A1W2P7B7
ENSMUST00000218059	-	655	-	ENSMUSP00000151958	64 (aa)	-	A0A1W2P871

Gene Model

Protein-Protein Interaction (PPI)

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000034024	Cct2	100	77.273	WBGene00000378	cct-2	100	66.541	Caenorhabditis_elegans
ENSMUSG00000034024	Cct2	100	98.438	ENSG00000166226	CCT2	100	97.570	Homo_sapiens
ENSMUSG00000034024	Cct2	100	75.000	YIL142W	CCT2	99	65.714	Saccharomyces_cerevisiae

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0002199	zona pellucida receptor complex	21880732.	IDA	Component
GO:0005524	ATP binding	-	IEA	Function
GO:0005737	cytoplasm	-	IEA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0005832	chaperonin-containing T-complex	21873635.	IBA	Component
GO:0005832	chaperonin-containing T-complex	7828721.7953530.	IDA	Component
GO:0005832	chaperonin-containing T-complex	-	ISO	Component
GO:0005874	microtubule	-	ISO	Component
GO:0006457	protein folding	-	IEA	Process
GO:0007339	binding of sperm to zona pellucida	21880732.	IDA	Process
GO:0031625	ubiquitin protein ligase binding	-	ISO	Function
GO:0032212	positive regulation of telomere maintenance via telomerase	-	ISO	Process
GO:0043209	myelin sheath	17634366.	HDA	Component
GO:0044183	protein binding involved in protein folding	-	ISO	Function
GO:0044297	cell body	21880732.	IDA	Component
GO:0050821	protein stabilization	-	ISO	Process
GO:0051082	unfolded protein binding	-	IEA	Function
GO:0051086	chaperone mediated protein folding independent of cofactor	-	ISO	Process
GO:0051131	chaperone-mediated protein complex assembly	-	ISO	Process
GO:0051973	positive regulation of telomerase activity	-	ISO	Process
GO:0090666	scaRNA localization to Cajal body	-	ISO	Process
GO:1901998	toxin transport	23716698.	IMP	Process
GO:1904851	positive regulation of establishment of protein localization to telomere	-	ISO	Process
GO:1904874	positive regulation of telomerase RNA localization to Cajal body	-	ISO	Process