EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000034194 (Gene tree)
Gene ID: 71843
Gene Symbol: R3hcc1
Alias: 1700020M16Rik
Full Name: R3H domain and coiled-coil containing 1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 10278 bases
Position: chr14:69697307-69707584
Accession: 1919093
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000113450	R3H	PF01424.22	2.3e-15	1	1
ENSMUSP00000113898	R3H	PF01424.22	2.3e-15	1	1
ENSMUSP00000150058	R3H	PF01424.22	2.3e-15	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000216152	-	1467	-	ENSMUSP00000150058	488 (aa)	-	Q8BSI6
ENSMUST00000118374	-	1726	-	ENSMUSP00000113450	488 (aa)	-	E9PUE1
ENSMUST00000121142	-	1958	-	ENSMUSP00000113898	488 (aa)	-	E9PUE1
ENSMUST00000138326	-	410	-	-	- (aa)	-	-
ENSMUST00000147609	-	440	-	-	- (aa)	-	-
ENSMUST00000128747	-	829	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000034194's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000034194's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000034194	R3hcc1	99	60.041	ENSG00000104679	R3HCC1	100	97.674	Homo_sapiens
ENSMUSG00000034194	R3hcc1	59	44.667	ENSAPOG00000003616	r3hcc1	79	44.667	Acanthochromis_polyacanthus
ENSMUSG00000034194	R3hcc1	99	63.232	ENSAMEG00000002963	R3HCC1	92	62.626	Ailuropoda_melanoleuca
ENSMUSG00000034194	R3hcc1	97	30.672	ENSACIG00000017144	r3hcc1	84	38.356	Amphilophus_citrinellus
ENSMUSG00000034194	R3hcc1	56	46.154	ENSAOCG00000003945	r3hcc1	81	45.333	Amphiprion_ocellaris
ENSMUSG00000034194	R3hcc1	57	46.154	ENSAPEG00000003613	r3hcc1	81	44.667	Amphiprion_percula
ENSMUSG00000034194	R3hcc1	56	41.781	ENSATEG00000023860	r3hcc1	66	42.667	Anabas_testudineus
ENSMUSG00000034194	R3hcc1	100	44.533	ENSACAG00000016627	R3HCC1	99	43.600	Anolis_carolinensis
ENSMUSG00000034194	R3hcc1	99	64.417	ENSANAG00000036169	R3HCC1	95	65.244	Aotus_nancymaae
ENSMUSG00000034194	R3hcc1	99	62.577	ENSBTAG00000025830	R3HCC1	96	62.500	Bos_taurus
ENSMUSG00000034194	R3hcc1	99	63.895	ENSCJAG00000020118	R3HCC1	99	56.389	Callithrix_jacchus
ENSMUSG00000034194	R3hcc1	99	56.566	ENSCAFG00000009210	R3HCC1	96	57.778	Canis_familiaris
ENSMUSG00000034194	R3hcc1	85	54.762	ENSCAFG00020012870	R3HCC1	86	54.524	Canis_lupus_dingo
ENSMUSG00000034194	R3hcc1	99	60.941	ENSCHIG00000009107	R3HCC1	99	60.204	Capra_hircus
ENSMUSG00000034194	R3hcc1	99	61.258	ENSTSYG00000000511	R3HCC1	77	65.112	Carlito_syrichta
ENSMUSG00000034194	R3hcc1	90	55.034	ENSCAPG00000015813	R3HCC1	52	62.963	Cavia_aperea
ENSMUSG00000034194	R3hcc1	99	62.398	ENSCPOG00000009696	R3HCC1	100	60.606	Cavia_porcellus
ENSMUSG00000034194	R3hcc1	99	62.805	ENSCCAG00000037811	R3HCC1	99	56.998	Cebus_capucinus
ENSMUSG00000034194	R3hcc1	99	59.642	ENSCATG00000032971	R3HCC1	99	57.201	Cercocebus_atys
ENSMUSG00000034194	R3hcc1	99	52.727	ENSCLAG00000015556	R3HCC1	83	63.786	Chinchilla_lanigera
ENSMUSG00000034194	R3hcc1	99	59.443	ENSCSAG00000016250	R3HCC1	91	63.895	Chlorocebus_sabaeus
ENSMUSG00000034194	R3hcc1	98	60.581	ENSCHOG00000000396	R3HCC1	94	60.494	Choloepus_hoffmanni
ENSMUSG00000034194	R3hcc1	99	61.741	ENSCANG00000029441	R3HCC1	99	58.502	Colobus_angolensis_palliatus
ENSMUSG00000034194	R3hcc1	100	79.837	ENSCGRG00001014977	R3hcc1	100	79.837	Cricetulus_griseus_chok1gshd
ENSMUSG00000034194	R3hcc1	100	79.837	ENSCGRG00000004454	R3hcc1	100	79.837	Cricetulus_griseus_crigri
ENSMUSG00000034194	R3hcc1	81	39.130	ENSCSEG00000005748	r3hcc1	77	46.711	Cynoglossus_semilaevis
ENSMUSG00000034194	R3hcc1	60	43.448	ENSDARG00000099593	r3hcc1	74	43.448	Danio_rerio
ENSMUSG00000034194	R3hcc1	99	61.807	ENSDNOG00000007168	R3HCC1	92	62.880	Dasypus_novemcinctus
ENSMUSG00000034194	R3hcc1	99	65.235	ENSDORG00000026365	R3hcc1	99	66.053	Dipodomys_ordii
ENSMUSG00000034194	R3hcc1	99	56.301	ENSETEG00000001147	R3HCC1	97	57.114	Echinops_telfairi
ENSMUSG00000034194	R3hcc1	99	59.274	ENSEASG00005018782	R3HCC1	81	61.895	Equus_asinus_asinus
ENSMUSG00000034194	R3hcc1	99	59.073	ENSECAG00000025013	R3HCC1	98	62.500	Equus_caballus
ENSMUSG00000034194	R3hcc1	99	60.692	ENSEEUG00000011918	R3HCC1	96	60.896	Erinaceus_europaeus
ENSMUSG00000034194	R3hcc1	91	34.141	ENSELUG00000023650	r3hcc1	69	49.474	Esox_lucius
ENSMUSG00000034194	R3hcc1	98	63.693	ENSFCAG00000012395	R3HCC1	95	63.169	Felis_catus
ENSMUSG00000034194	R3hcc1	97	38.337	ENSFALG00000001646	R3HCC1	81	37.822	Ficedula_albicollis
ENSMUSG00000034194	R3hcc1	100	62.449	ENSFDAG00000001572	R3HCC1	100	62.753	Fukomys_damarensis
ENSMUSG00000034194	R3hcc1	57	36.620	ENSGMOG00000017590	-	68	43.333	Gadus_morhua
ENSMUSG00000034194	R3hcc1	59	45.390	ENSGAFG00000008747	-	65	43.624	Gambusia_affinis
ENSMUSG00000034194	R3hcc1	97	32.563	ENSGACG00000008447	r3hcc1	69	44.000	Gasterosteus_aculeatus
ENSMUSG00000034194	R3hcc1	85	81.707	ENSGGOG00000013817	R3HCC1	99	64.503	Gorilla_gorilla
ENSMUSG00000034194	R3hcc1	83	77.358	ENSHGLG00000010517	R3HCC1	92	62.874	Heterocephalus_glaber_female
ENSMUSG00000034194	R3hcc1	83	77.358	ENSHGLG00100006388	R3HCC1	92	62.874	Heterocephalus_glaber_male
ENSMUSG00000034194	R3hcc1	69	38.462	ENSHCOG00000011745	r3hcc1	70	44.898	Hippocampus_comes
ENSMUSG00000034194	R3hcc1	74	43.448	ENSIPUG00000024504	r3hcc1	64	45.890	Ictalurus_punctatus
ENSMUSG00000034194	R3hcc1	75	78.049	ENSSTOG00000027130	R3HCC1	78	78.049	Ictidomys_tridecemlineatus
ENSMUSG00000034194	R3hcc1	99	67.944	ENSJJAG00000013075	R3hcc1	99	68.687	Jaculus_jaculus
ENSMUSG00000034194	R3hcc1	54	44.056	ENSKMAG00000000286	r3hcc1	68	42.667	Kryptolebias_marmoratus
ENSMUSG00000034194	R3hcc1	64	50.345	ENSLACG00000011894	R3HCC1	65	50.340	Latimeria_chalumnae
ENSMUSG00000034194	R3hcc1	69	46.309	ENSLOCG00000015442	r3hcc1	78	46.479	Lepisosteus_oculatus
ENSMUSG00000034194	R3hcc1	99	62.195	ENSLAFG00000016137	R3HCC1	95	61.382	Loxodonta_africana
ENSMUSG00000034194	R3hcc1	99	59.642	ENSMFAG00000032894	R3HCC1	99	57.201	Macaca_fascicularis
ENSMUSG00000034194	R3hcc1	99	59.841	ENSMMUG00000016655	R3HCC1	99	57.404	Macaca_mulatta
ENSMUSG00000034194	R3hcc1	99	61.055	ENSMNEG00000043283	R3HCC1	99	57.201	Macaca_nemestrina
ENSMUSG00000034194	R3hcc1	99	60.649	ENSMLEG00000030147	R3HCC1	99	57.201	Mandrillus_leucophaeus
ENSMUSG00000034194	R3hcc1	55	44.898	ENSMAMG00000018146	r3hcc1	67	44.898	Mastacembelus_armatus
ENSMUSG00000034194	R3hcc1	98	36.714	ENSMGAG00000001356	R3HCC1	62	58.940	Meleagris_gallopavo
ENSMUSG00000034194	R3hcc1	100	77.733	ENSMAUG00000016096	R3hcc1	100	76.647	Mesocricetus_auratus
ENSMUSG00000034194	R3hcc1	99	61.507	ENSMICG00000011146	R3HCC1	94	63.747	Microcebus_murinus
ENSMUSG00000034194	R3hcc1	100	77.189	ENSMOCG00000018508	R3hcc1	100	78.208	Microtus_ochrogaster
ENSMUSG00000034194	R3hcc1	97	43.802	ENSMODG00000016809	-	99	44.330	Monodelphis_domestica
ENSMUSG00000034194	R3hcc1	100	97.541	MGP_CAROLIEiJ_G0019467	R3hcc1	100	97.541	Mus_caroli
ENSMUSG00000034194	R3hcc1	100	90.486	MGP_PahariEiJ_G0030484	R3hcc1	100	90.688	Mus_pahari
ENSMUSG00000034194	R3hcc1	100	99.389	MGP_SPRETEiJ_G0020359	R3hcc1	100	99.389	Mus_spretus
ENSMUSG00000034194	R3hcc1	99	57.778	ENSMPUG00000003457	R3HCC1	87	60.808	Mustela_putorius_furo
ENSMUSG00000034194	R3hcc1	83	75.000	ENSMLUG00000000266	R3HCC1	92	60.202	Myotis_lucifugus
ENSMUSG00000034194	R3hcc1	91	59.243	ENSNLEG00000015944	R3HCC1	85	63.029	Nomascus_leucogenys
ENSMUSG00000034194	R3hcc1	78	62.637	ENSMEUG00000010587	R3HCC1	98	49.590	Notamacropus_eugenii
ENSMUSG00000034194	R3hcc1	98	60.752	ENSODEG00000007529	R3HCC1	100	58.601	Octodon_degus
ENSMUSG00000034194	R3hcc1	80	78.344	ENSOCUG00000023554	R3HCC1	84	58.811	Oryctolagus_cuniculus
ENSMUSG00000034194	R3hcc1	60	42.442	ENSORLG00000016816	r3hcc1	71	44.138	Oryzias_latipes
ENSMUSG00000034194	R3hcc1	60	42.442	ENSORLG00020012005	r3hcc1	71	44.138	Oryzias_latipes_hni
ENSMUSG00000034194	R3hcc1	60	43.023	ENSORLG00015007018	r3hcc1	71	44.828	Oryzias_latipes_hsok
ENSMUSG00000034194	R3hcc1	67	39.881	ENSOMEG00000000816	r3hcc1	81	42.069	Oryzias_melastigma
ENSMUSG00000034194	R3hcc1	50	66.000	ENSOGAG00000001291	R3HCC1	92	61.866	Otolemur_garnettii
ENSMUSG00000034194	R3hcc1	99	61.396	ENSOARG00000010146	R3HCC1	96	61.258	Ovis_aries
ENSMUSG00000034194	R3hcc1	99	59.553	ENSPPAG00000033165	R3HCC1	99	63.895	Pan_paniscus
ENSMUSG00000034194	R3hcc1	99	59.553	ENSPPRG00000002522	R3HCC1	99	63.008	Panthera_pardus
ENSMUSG00000034194	R3hcc1	93	60.573	ENSPTIG00000011230	R3HCC1	95	60.177	Panthera_tigris_altaica
ENSMUSG00000034194	R3hcc1	99	60.163	ENSPTRG00000020076	R3HCC1	99	59.026	Pan_troglodytes
ENSMUSG00000034194	R3hcc1	99	59.443	ENSPANG00000000453	R3HCC1	99	57.201	Papio_anubis
ENSMUSG00000034194	R3hcc1	55	48.000	ENSPKIG00000020397	-	68	48.000	Paramormyrops_kingsleyae
ENSMUSG00000034194	R3hcc1	55	48.000	ENSPKIG00000014426	-	74	48.000	Paramormyrops_kingsleyae
ENSMUSG00000034194	R3hcc1	98	43.788	ENSPSIG00000017664	R3HCC1	97	42.480	Pelodiscus_sinensis
ENSMUSG00000034194	R3hcc1	100	80.081	ENSPEMG00000007118	R3hcc1	100	79.472	Peromyscus_maniculatus_bairdii
ENSMUSG00000034194	R3hcc1	97	31.513	ENSPFOG00000022301	r3hcc1	65	41.892	Poecilia_formosa
ENSMUSG00000034194	R3hcc1	59	42.958	ENSPLAG00000010794	r3hcc1	65	41.892	Poecilia_latipinna
ENSMUSG00000034194	R3hcc1	97	31.513	ENSPMEG00000022515	r3hcc1	65	41.892	Poecilia_mexicana
ENSMUSG00000034194	R3hcc1	97	31.646	ENSPREG00000000713	r3hcc1	64	41.216	Poecilia_reticulata
ENSMUSG00000034194	R3hcc1	93	60.486	ENSPPYG00000018436	R3HCC1	99	61.874	Pongo_abelii
ENSMUSG00000034194	R3hcc1	68	77.528	ENSPCAG00000012229	R3HCC1	72	77.528	Procavia_capensis
ENSMUSG00000034194	R3hcc1	99	60.692	ENSPCOG00000027554	R3HCC1	99	63.340	Propithecus_coquereli
ENSMUSG00000034194	R3hcc1	99	58.264	ENSPVAG00000009829	R3HCC1	95	63.223	Pteropus_vampyrus
ENSMUSG00000034194	R3hcc1	58	43.357	ENSPNAG00000023875	r3hcc1	74	43.056	Pygocentrus_nattereri
ENSMUSG00000034194	R3hcc1	100	87.143	ENSRNOG00000016777	AABR07018321.1	82	87.551	Rattus_norvegicus
ENSMUSG00000034194	R3hcc1	99	60.437	ENSRBIG00000028045	R3HCC1	99	65.720	Rhinopithecus_bieti
ENSMUSG00000034194	R3hcc1	99	60.437	ENSRROG00000031126	R3HCC1	99	58.621	Rhinopithecus_roxellana
ENSMUSG00000034194	R3hcc1	99	62.805	ENSSBOG00000022590	R3HCC1	99	63.415	Saimiri_boliviensis_boliviensis
ENSMUSG00000034194	R3hcc1	57	86.905	ENSSHAG00000016526	-	52	86.905	Sarcophilus_harrisii
ENSMUSG00000034194	R3hcc1	56	47.436	ENSSFOG00015013507	r3hcc1	70	46.980	Scleropages_formosus
ENSMUSG00000034194	R3hcc1	63	46.154	ENSSDUG00000022786	r3hcc1	73	44.966	Seriola_dumerili
ENSMUSG00000034194	R3hcc1	63	46.154	ENSSLDG00000019031	r3hcc1	73	44.966	Seriola_lalandi_dorsalis
ENSMUSG00000034194	R3hcc1	77	45.349	ENSSPAG00000013497	r3hcc1	87	47.020	Stegastes_partitus
ENSMUSG00000034194	R3hcc1	99	59.312	ENSSSCG00000039915	-	93	61.943	Sus_scrofa
ENSMUSG00000034194	R3hcc1	98	58.420	ENSSSCG00000037347	-	92	57.796	Sus_scrofa
ENSMUSG00000034194	R3hcc1	61	37.805	ENSTRUG00000015880	r3hcc1	66	41.667	Takifugu_rubripes
ENSMUSG00000034194	R3hcc1	98	52.881	ENSTTRG00000012247	R3HCC1	94	56.263	Tursiops_truncatus
ENSMUSG00000034194	R3hcc1	98	62.268	ENSUAMG00000007344	R3HCC1	98	61.523	Ursus_americanus
ENSMUSG00000034194	R3hcc1	99	58.848	ENSVVUG00000005056	R3HCC1	96	59.798	Vulpes_vulpes
ENSMUSG00000034194	R3hcc1	56	43.056	ENSXCOG00000017626	r3hcc1	61	42.000	Xiphophorus_couchianus
ENSMUSG00000034194	R3hcc1	59	43.357	ENSXMAG00000018375	r3hcc1	65	42.282	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003674	molecular_function	-	ND	Function
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0008150	biological_process	-	ND	Process
GO:0035145	exon-exon junction complex	21873635.	IBA	Component