EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Gene Ontology

Description

Ensembl ID: ENSMUSG00000034235 (Gene tree)
Gene ID: 78787
Gene Symbol: Usp54
Alias: 4930429G18Rik|C030002J06Rik
Full Name: ubiquitin specific peptidase 54
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 92152
Position: chr14: 20548912-20641063
Accession: 1926037
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000127342	-	1980	-	-	- (aa)	-	-
ENSMUST00000123287	-	666	-	ENSMUSP00000117503	222 (aa)	-	F6ZXV1
ENSMUST00000035340	-	6495	XM_011245225	ENSMUSP00000036214	1588 (aa)	XP_011243527	Q8BL06
ENSMUST00000022356	-	6580	XM_006519703	ENSMUSP00000022356	1588 (aa)	XP_006519766	Q8BL06
ENSMUST00000143267	-	3423	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000034235's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000034235's network

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003674	molecular_function	-	ND	Function
GO:0005575	cellular_component	-	ND	Component
GO:0008150	biological_process	-	ND	Process
GO:0016579	protein deubiquitination	-	IEA	Process
GO:0036459	thiol-dependent ubiquitinyl hydrolase activity	-	IEA	Function