EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Expression
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSMUSG00000034610 (Gene tree)
Gene ID
230594
Gene Symbol
Tut4
Alias
6030404K05Rik|9230115F04Rik|Tent3a|Zcchc11
Full Name
terminal uridylyl transferase 4
Gene Type
protein_coding
Species
Mus_musculus
Status
confidence
Strand
Plus strand
Length
99996 bases
Position
chr4:108459426-108559421
Accession
2445126
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMUSP00000044836zf-CCHCPF00098.231e-1012
ENSMUSP00000044836zf-CCHCPF00098.231e-1022
ENSMUSP00000095538zf-CCHCPF00098.231e-1012
ENSMUSP00000095538zf-CCHCPF00098.231e-1022
ENSMUSP00000044836PAP_assocPF03828.194.4e-2812
ENSMUSP00000044836PAP_assocPF03828.194.4e-2822
ENSMUSP00000095538PAP_assocPF03828.194.9e-2812
ENSMUSP00000095538PAP_assocPF03828.194.9e-2822
ENSMUSP00000120172PAP_assocPF03828.195.8e-1111
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
27452465The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart DiseaseIC & HL_12016 Jul 21Liao YDOI: 10.1016/j.celrep.2016.06.084
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMUST00000151349-541--- (aa)--
ENSMUST00000106673-679-ENSMUSP0000010228463 (aa)-A2A9H0
ENSMUST00000127602-484--- (aa)--
ENSMUST00000128042-587-ENSMUSP00000116253105 (aa)-A2A8R1
ENSMUST00000097925-5865XM_006502978ENSMUSP000000955381648 (aa)XP_006503041A2A8R7
ENSMUST00000153916-567--- (aa)--
ENSMUST00000155068-3283XM_006502983ENSMUSP000001201721006 (aa)XP_006503046A0A0A0MQJ6
ENSMUST00000043368-6054XM_017320140ENSMUSP000000448361644 (aa)XP_017175629B2RX14
ENSMUST00000145590-2472--- (aa)--
ENSMUST00000138809-636--- (aa)--
ENSMUST00000138088-591--- (aa)--
Gene Model
Click here to download ENSMUSG00000034610's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000034610's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMUSG00000034610Tut45958.396ENSMUSG00000035248Tut76667.209
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMUSG00000034610Tut410086.639ENSG00000134744TUT49991.964Homo_sapiens
ENSMUSG00000034610Tut410086.571ENSAMEG00000009340TUT410086.571Ailuropoda_melanoleuca
ENSMUSG00000034610Tut45357.795ENSACIG00000018887-8450.989Amphilophus_citrinellus
ENSMUSG00000034610Tut45764.679ENSACIG00000018199TUT49563.817Amphilophus_citrinellus
ENSMUSG00000034610Tut49053.478ENSAOCG00000007862TUT49553.427Amphiprion_ocellaris
ENSMUSG00000034610Tut49053.727ENSAPEG00000019857TUT49752.548Amphiprion_percula
ENSMUSG00000034610Tut46347.851ENSATEG00000022516-9257.101Anabas_testudineus
ENSMUSG00000034610Tut48063.672ENSATEG00000003823TUT49163.377Anabas_testudineus
ENSMUSG00000034610Tut49964.337ENSAPLG00000006345TUT410064.458Anas_platyrhynchos
ENSMUSG00000034610Tut48764.147ENSACAG00000008282TUT49764.338Anolis_carolinensis
ENSMUSG00000034610Tut410083.453ENSANAG00000013486TUT49989.074Aotus_nancymaae
ENSMUSG00000034610Tut47372.857ENSACLG00000023312TUT49362.613Astatotilapia_calliptera
ENSMUSG00000034610Tut47460.330ENSAMXG00000007030TUT48855.683Astyanax_mexicanus
ENSMUSG00000034610Tut410085.354ENSBTAG00000002721TUT410085.594Bos_taurus
ENSMUSG00000034610Tut410084.643ENSCJAG00000021588TUT410085.783Callithrix_jacchus
ENSMUSG00000034610Tut410087.043ENSCAFG00000003734TUT410087.043Canis_familiaris
ENSMUSG00000034610Tut45592.063ENSCAFG00020010923-9391.358Canis_lupus_dingo
ENSMUSG00000034610Tut410085.996ENSCHIG00000023944TUT410085.996Capra_hircus
ENSMUSG00000034610Tut410086.886ENSTSYG00000009885TUT410087.066Carlito_syrichta
ENSMUSG00000034610Tut410071.523ENSCAPG00000005680TUT410072.848Cavia_aperea
ENSMUSG00000034610Tut410081.299ENSCPOG00000005086TUT410082.261Cavia_porcellus
ENSMUSG00000034610Tut49391.892ENSCCAG00000036903TUT410091.892Cebus_capucinus
ENSMUSG00000034610Tut45758.627ENSCCAG00000025142-6762.295Cebus_capucinus
ENSMUSG00000034610Tut410086.399ENSCATG00000024618TUT410086.579Cercocebus_atys
ENSMUSG00000034610Tut410086.438ENSCLAG00000005255TUT410086.438Chinchilla_lanigera
ENSMUSG00000034610Tut410086.759ENSCSAG00000001277TUT410086.818Chlorocebus_sabaeus
ENSMUSG00000034610Tut48095.226ENSCHOG00000010995TUT48695.226Choloepus_hoffmanni
ENSMUSG00000034610Tut48871.255ENSCPBG00000014796TUT49864.689Chrysemys_picta_bellii
ENSMUSG00000034610Tut410086.081ENSCANG00000036212TUT49990.288Colobus_angolensis_palliatus
ENSMUSG00000034610Tut410094.676ENSCGRG00001020315-10094.676Cricetulus_griseus_chok1gshd
ENSMUSG00000034610Tut410094.555ENSCGRG00000017571Tut410094.555Cricetulus_griseus_crigri
ENSMUSG00000034610Tut45664.615ENSCSEG00000002476TUT49663.846Cynoglossus_semilaevis
ENSMUSG00000034610Tut47164.352ENSCVAG00000012659TUT48063.733Cyprinodon_variegatus
ENSMUSG00000034610Tut45761.679ENSDARG00000101404CABZ01065131.19960.119Danio_rerio
ENSMUSG00000034610Tut410086.902ENSDNOG00000013920TUT410086.902Dasypus_novemcinctus
ENSMUSG00000034610Tut410087.990ENSDORG00000027891Tut410087.990Dipodomys_ordii
ENSMUSG00000034610Tut49667.735ENSETEG00000016298TUT48595.238Echinops_telfairi
ENSMUSG00000034610Tut46158.495ENSEBUG00000009834TUT48558.495Eptatretus_burgeri
ENSMUSG00000034610Tut410087.095ENSECAG00000021261TUT410087.335Equus_caballus
ENSMUSG00000034610Tut410085.377ENSEEUG00000003834TUT49585.922Erinaceus_europaeus
ENSMUSG00000034610Tut47261.470ENSELUG00000024167TUT47861.410Esox_lucius
ENSMUSG00000034610Tut410086.459ENSFCAG00000003246TUT410086.579Felis_catus
ENSMUSG00000034610Tut49962.945ENSFALG00000005607TUT49863.005Ficedula_albicollis
ENSMUSG00000034610Tut410086.083ENSFDAG00000016676TUT410086.083Fukomys_damarensis
ENSMUSG00000034610Tut45762.651ENSFHEG00000002296-9762.405Fundulus_heteroclitus
ENSMUSG00000034610Tut47162.880ENSGMOG00000001281TUT49756.490Gadus_morhua
ENSMUSG00000034610Tut49467.693ENSGALG00000010629TUT49967.855Gallus_gallus
ENSMUSG00000034610Tut45665.008ENSGAFG00000011427-9663.919Gambusia_affinis
ENSMUSG00000034610Tut47362.516ENSGACG00000005282-9362.047Gasterosteus_aculeatus
ENSMUSG00000034610Tut49963.059ENSGAGG00000020531TUT49968.085Gopherus_agassizii
ENSMUSG00000034610Tut45460.903ENSHBUG00000008564-10060.620Haplochromis_burtoni
ENSMUSG00000034610Tut410086.907ENSHGLG00000000804TUT410086.907Heterocephalus_glaber_female
ENSMUSG00000034610Tut410086.907ENSHGLG00100002051TUT410086.907Heterocephalus_glaber_male
ENSMUSG00000034610Tut45762.500ENSHCOG00000009746-9761.353Hippocampus_comes
ENSMUSG00000034610Tut47162.195ENSIPUG00000002638zcchc118160.870Ictalurus_punctatus
ENSMUSG00000034610Tut410088.635ENSSTOG00000015611TUT410088.635Ictidomys_tridecemlineatus
ENSMUSG00000034610Tut45764.157ENSKMAG00000017970TUT49662.651Kryptolebias_marmoratus
ENSMUSG00000034610Tut48256.060ENSLBEG00000006518TUT48755.776Labrus_bergylta
ENSMUSG00000034610Tut49956.749ENSLACG00000010748TUT49856.866Latimeria_chalumnae
ENSMUSG00000034610Tut47765.063ENSLOCG00000006248TUT49364.549Lepisosteus_oculatus
ENSMUSG00000034610Tut49986.772ENSLAFG00000003763TUT410086.772Loxodonta_africana
ENSMUSG00000034610Tut410086.459ENSMFAG00000011842TUT410086.639Macaca_fascicularis
ENSMUSG00000034610Tut49983.333ENSMMUG00000017023TUT410090.137Macaca_mulatta
ENSMUSG00000034610Tut49881.735ENSMNEG00000009839TUT49981.796Macaca_nemestrina
ENSMUSG00000034610Tut410086.639ENSMLEG00000036158TUT49790.288Mandrillus_leucophaeus
ENSMUSG00000034610Tut46673.846ENSMAMG00000014890TUT48063.089Mastacembelus_armatus
ENSMUSG00000034610Tut47372.857ENSMZEG00005017227TUT49362.613Maylandia_zebra
ENSMUSG00000034610Tut48071.236ENSMGAG00000011185TUT410071.439Meleagris_gallopavo
ENSMUSG00000034610Tut49991.608ENSMAUG00000010283Tut49991.608Mesocricetus_auratus
ENSMUSG00000034610Tut410084.712ENSMICG00000015853TUT410084.832Microcebus_murinus
ENSMUSG00000034610Tut49991.508ENSMOCG00000012851Tut49991.508Microtus_ochrogaster
ENSMUSG00000034610Tut45263.889ENSMMOG00000017546-5566.398Mola_mola
ENSMUSG00000034610Tut45762.794ENSMMOG00000016870-9863.249Mola_mola
ENSMUSG00000034610Tut49967.259ENSMODG00000000618TUT49967.200Monodelphis_domestica
ENSMUSG00000034610Tut45762.991ENSMALG00000014488-9662.293Monopterus_albus
ENSMUSG00000034610Tut410098.969MGP_CAROLIEiJ_G0026268Tut410098.969Mus_caroli
ENSMUSG00000034610Tut410097.574MGP_PahariEiJ_G0028601Tut410097.574Mus_pahari
ENSMUSG00000034610Tut410099.454MGP_SPRETEiJ_G0027237Tut410099.454Mus_spretus
ENSMUSG00000034610Tut410084.565ENSMPUG00000006880TUT410084.264Mustela_putorius_furo
ENSMUSG00000034610Tut410086.197ENSMLUG00000001067TUT410086.076Myotis_lucifugus
ENSMUSG00000034610Tut49987.325ENSNGAG00000011508Tut49987.325Nannospalax_galili
ENSMUSG00000034610Tut45764.762ENSNBRG00000005683-9664.184Neolamprologus_brichardi
ENSMUSG00000034610Tut410086.988ENSNLEG00000017998TUT49790.744Nomascus_leucogenys
ENSMUSG00000034610Tut48268.526ENSMEUG00000003865TUT48469.354Notamacropus_eugenii
ENSMUSG00000034610Tut410072.182ENSOPRG00000016362TUT410072.422Ochotona_princeps
ENSMUSG00000034610Tut410085.036ENSODEG00000007328TUT410085.036Octodon_degus
ENSMUSG00000034610Tut47672.857ENSONIG00000019455TUT49563.462Oreochromis_niloticus
ENSMUSG00000034610Tut49963.140ENSOANG00000012864TUT49964.281Ornithorhynchus_anatinus
ENSMUSG00000034610Tut410085.714ENSOCUG00000002390TUT410085.903Oryctolagus_cuniculus
ENSMUSG00000034610Tut45765.440ENSORLG00000013135-9563.738Oryzias_latipes
ENSMUSG00000034610Tut45765.710ENSORLG00020002631-9564.058Oryzias_latipes_hni
ENSMUSG00000034610Tut45765.764ENSORLG00015001219-9564.753Oryzias_latipes_hsok
ENSMUSG00000034610Tut45661.912ENSOMEG00000015574-9561.769Oryzias_melastigma
ENSMUSG00000034610Tut410085.552ENSOGAG00000005425TUT410085.791Otolemur_garnettii
ENSMUSG00000034610Tut410086.192ENSOARG00000005494TUT410086.192Ovis_aries
ENSMUSG00000034610Tut410084.917ENSPPAG00000037653TUT410086.700Pan_paniscus
ENSMUSG00000034610Tut410087.298ENSPPRG00000020521TUT410087.418Panthera_pardus
ENSMUSG00000034610Tut410087.298ENSPTIG00000010511TUT410087.418Panthera_tigris_altaica
ENSMUSG00000034610Tut410086.878ENSPTRG00000000740TUT410086.938Pan_troglodytes
ENSMUSG00000034610Tut410085.006ENSPANG00000005042TUT410085.185Papio_anubis
ENSMUSG00000034610Tut45764.134ENSPKIG00000004670TUT49162.725Paramormyrops_kingsleyae
ENSMUSG00000034610Tut49963.114ENSPSIG00000016704TUT410063.054Pelodiscus_sinensis
ENSMUSG00000034610Tut49991.808ENSPEMG00000023722Tut49991.808Peromyscus_maniculatus_bairdii
ENSMUSG00000034610Tut49966.369ENSPCIG00000022380TUT49866.389Phascolarctos_cinereus
ENSMUSG00000034610Tut48155.653ENSPFOG00000002439TUT49555.248Poecilia_formosa
ENSMUSG00000034610Tut45664.386ENSPLAG00000008701-9663.297Poecilia_latipinna
ENSMUSG00000034610Tut45664.230ENSPMEG00000006996-9663.142Poecilia_mexicana
ENSMUSG00000034610Tut410086.426ENSPPYG00000001347TUT410086.667Pongo_abelii
ENSMUSG00000034610Tut46798.413ENSPCAG00000013380TUT49274.736Procavia_capensis
ENSMUSG00000034610Tut410083.873ENSPCOG00000007824TUT410083.933Propithecus_coquereli
ENSMUSG00000034610Tut410077.804ENSPVAG00000009804TUT410078.104Pteropus_vampyrus
ENSMUSG00000034610Tut48163.001ENSPNYG00000023175TUT49362.743Pundamilia_nyererei
ENSMUSG00000034610Tut47259.956ENSPNAG00000022786TUT48854.702Pygocentrus_nattereri
ENSMUSG00000034610Tut410093.867ENSRNOG00000052062Tut410093.867Rattus_norvegicus
ENSMUSG00000034610Tut410083.763ENSRBIG00000027989TUT410083.883Rhinopithecus_bieti
ENSMUSG00000034610Tut410086.579ENSRROG00000034868TUT410090.605Rhinopithecus_roxellana
ENSMUSG00000034610Tut410085.671ENSSBOG00000013661TUT410085.791Saimiri_boliviensis_boliviensis
ENSMUSG00000034610Tut45758.442ENSSBOG00000020099-7161.564Saimiri_boliviensis_boliviensis
ENSMUSG00000034610Tut49270.706ENSSHAG00000006231TUT410066.066Sarcophilus_harrisii
ENSMUSG00000034610Tut47163.956ENSSFOG00015013524zcchc118463.956Scleropages_formosus
ENSMUSG00000034610Tut47164.126ENSSMAG00000016072TUT48655.922Scophthalmus_maximus
ENSMUSG00000034610Tut45764.114ENSSDUG00000021923TUT49663.268Seriola_dumerili
ENSMUSG00000034610Tut48889.439ENSSARG00000009798TUT48989.439Sorex_araneus
ENSMUSG00000034610Tut49759.657ENSSPUG00000013287TUT49164.343Sphenodon_punctatus
ENSMUSG00000034610Tut45757.421ENSSPAG00000008141-9656.587Stegastes_partitus
ENSMUSG00000034610Tut410087.914ENSSSCG00000003859TUT410088.304Sus_scrofa
ENSMUSG00000034610Tut49964.157ENSTGUG00000009011TUT410064.157Taeniopygia_guttata
ENSMUSG00000034610Tut45875.969ENSTNIG00000002785-8675.385Tetraodon_nigroviridis
ENSMUSG00000034610Tut475100.000ENSTBEG00000001230TUT473100.000Tupaia_belangeri
ENSMUSG00000034610Tut410086.886ENSTTRG00000016142TUT410087.126Tursiops_truncatus
ENSMUSG00000034610Tut410087.274ENSUAMG00000000759TUT410087.274Ursus_americanus
ENSMUSG00000034610Tut410085.081ENSUMAG00000022669TUT410084.781Ursus_maritimus
ENSMUSG00000034610Tut410081.366ENSVPAG00000000910TUT410081.486Vicugna_pacos
ENSMUSG00000034610Tut410086.909ENSVVUG00000002703TUT49989.818Vulpes_vulpes
ENSMUSG00000034610Tut48260.405ENSXETG00000008061tut49860.188Xenopus_tropicalis
ENSMUSG00000034610Tut45664.587ENSXCOG00000007204-9663.495Xiphophorus_couchianus
ENSMUSG00000034610Tut45664.743ENSXMAG00000000751-9663.651Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0001556oocyte maturation28792939.IMPProcess
GO:0001816cytokine production16643855.IDAProcess
GO:0003676nucleic acid binding-IEAFunction
GO:0005515protein binding16643855.28671666.IPIFunction
GO:0005634nucleus16643855.IDAComponent
GO:0005730nucleolus-ISOComponent
GO:0005737cytoplasm16643855.IDAComponent
GO:0005737cytoplasm-ISOComponent
GO:0005829cytosol-ISOComponent
GO:0008270zinc ion binding-IEAFunction
GO:0010526negative regulation of transposition, RNA-mediated-ISOProcess
GO:0010586miRNA metabolic process19701194.IMPProcess
GO:0010586miRNA metabolic process-ISOProcess
GO:0010587miRNA catabolic process-ISOProcess
GO:0016740transferase activity-IEAFunction
GO:0016779nucleotidyltransferase activity-IEAFunction
GO:0019827stem cell population maintenance-ISOProcess
GO:0031047gene silencing by RNA-IEAProcess
GO:0031054pre-miRNA processing-ISOProcess
GO:0031123RNA 3'-end processing19701194.IDAProcess
GO:0031123RNA 3'-end processing-ISOProcess
GO:0031664regulation of lipopolysaccharide-mediated signaling pathway16643855.IDAProcess
GO:0032088negative regulation of NF-kappaB transcription factor activity16643855.IDAProcess
GO:0032755positive regulation of interleukin-6 production19701194.IMPProcess
GO:0035198miRNA binding28671666.IDAFunction
GO:0036464cytoplasmic ribonucleoprotein granule-ISOComponent
GO:0046872metal ion binding-IEAFunction
GO:0050265RNA uridylyltransferase activity19701194.28671666.IDAFunction
GO:0050265RNA uridylyltransferase activity-ISOFunction
GO:0070102interleukin-6-mediated signaling pathway19701194.IMPProcess
GO:0070569uridylyltransferase activity28671666.IDAFunction
GO:0070569uridylyltransferase activity28792939.IMPFunction
GO:0071076RNA 3' uridylation28671666.IDAProcess
GO:0071076RNA 3' uridylation28792939.IMPProcess
GO:1990074polyuridylation-dependent mRNA catabolic process28792939.IMPProcess

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