EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000034621 (Gene tree)
Gene ID: 237943
Gene Symbol: Gpatch8
Alias: 5430405G24Rik|ENSMUSG00000075516|Fbm1|Gpatc8
Full Name: G patch domain containing 8
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 80478 bases
Position: chr11:102475915-102556392
Accession: 1918667
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000120649	zf-C2H2_jaz	PF12171.8	6.2e-06	1	1
ENSMUSP00000120649	G-patch	PF01585.23	1.9e-12	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000143842	-	6871	XM_006533248	ENSMUSP00000120649	1505 (aa)	XP_006533311	A2A6A1
ENSMUST00000125754	-	893	-	-	- (aa)	-	-
ENSMUST00000131573	-	390	-	-	- (aa)	-	-
ENSMUST00000126804	-	387	-	-	- (aa)	-	-
ENSMUST00000069673	-	5597	-	-	- (aa)	-	-
ENSMUST00000127018	-	432	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000034621's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000034621's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000034621	Gpatch8	100	88.882	ENSG00000186566	GPATCH8	93	100.000	Homo_sapiens
ENSMUSG00000034621	Gpatch8	100	88.087	ENSAMEG00000018376	GPATCH8	99	89.264	Ailuropoda_melanoleuca
ENSMUSG00000034621	Gpatch8	54	63.088	ENSAPLG00000003095	GPATCH8	55	63.082	Anas_platyrhynchos
ENSMUSG00000034621	Gpatch8	100	64.944	ENSACAG00000012522	GPATCH8	55	58.851	Anolis_carolinensis
ENSMUSG00000034621	Gpatch8	100	88.286	ENSANAG00000032773	GPATCH8	100	89.411	Aotus_nancymaae
ENSMUSG00000034621	Gpatch8	100	89.095	ENSBTAG00000038316	GPATCH8	100	89.689	Bos_taurus
ENSMUSG00000034621	Gpatch8	100	87.756	ENSCJAG00000009807	GPATCH8	100	88.882	Callithrix_jacchus
ENSMUSG00000034621	Gpatch8	100	88.551	ENSCAFG00000014136	GPATCH8	100	89.610	Canis_familiaris
ENSMUSG00000034621	Gpatch8	99	88.451	ENSCAFG00020009830	GPATCH8	99	89.519	Canis_lupus_dingo
ENSMUSG00000034621	Gpatch8	99	87.839	ENSCHIG00000008962	GPATCH8	99	89.067	Capra_hircus
ENSMUSG00000034621	Gpatch8	100	82.310	ENSTSYG00000033153	GPATCH8	100	82.980	Carlito_syrichta
ENSMUSG00000034621	Gpatch8	99	75.650	ENSCAPG00000004450	GPATCH8	99	74.383	Cavia_aperea
ENSMUSG00000034621	Gpatch8	99	75.871	ENSCPOG00000039068	GPATCH8	100	74.799	Cavia_porcellus
ENSMUSG00000034621	Gpatch8	100	88.484	ENSCCAG00000030686	GPATCH8	100	89.411	Cebus_capucinus
ENSMUSG00000034621	Gpatch8	100	88.882	ENSCATG00000028156	GPATCH8	100	90.007	Cercocebus_atys
ENSMUSG00000034621	Gpatch8	100	88.683	ENSCSAG00000003586	GPATCH8	100	89.808	Chlorocebus_sabaeus
ENSMUSG00000034621	Gpatch8	100	68.125	ENSCPBG00000008955	GPATCH8	55	62.175	Chrysemys_picta_bellii
ENSMUSG00000034621	Gpatch8	100	88.617	ENSCANG00000039731	GPATCH8	100	89.543	Colobus_angolensis_palliatus
ENSMUSG00000034621	Gpatch8	100	92.231	ENSCGRG00001020210	Gpatch8	100	90.505	Cricetulus_griseus_chok1gshd
ENSMUSG00000034621	Gpatch8	100	92.231	ENSCGRG00000017090	Gpatch8	100	90.505	Cricetulus_griseus_crigri
ENSMUSG00000034621	Gpatch8	100	87.881	ENSDNOG00000005102	GPATCH8	100	87.616	Dasypus_novemcinctus
ENSMUSG00000034621	Gpatch8	100	90.007	ENSDORG00000027664	Gpatch8	100	89.940	Dipodomys_ordii
ENSMUSG00000034621	Gpatch8	100	82.891	ENSETEG00000001325	GPATCH8	100	83.886	Echinops_telfairi
ENSMUSG00000034621	Gpatch8	67	47.565	ENSEBUG00000005749	gpatch8	70	48.756	Eptatretus_burgeri
ENSMUSG00000034621	Gpatch8	100	89.331	ENSEASG00005010264	GPATCH8	92	90.192	Equus_asinus_asinus
ENSMUSG00000034621	Gpatch8	100	89.264	ENSECAG00000040232	GPATCH8	99	90.126	Equus_caballus
ENSMUSG00000034621	Gpatch8	94	100.000	ENSEEUG00000008586	GPATCH8	94	100.000	Erinaceus_europaeus
ENSMUSG00000034621	Gpatch8	55	86.867	ENSFCAG00000043334	GPATCH8	56	86.962	Felis_catus
ENSMUSG00000034621	Gpatch8	99	65.395	ENSFALG00000009554	GPATCH8	55	61.990	Ficedula_albicollis
ENSMUSG00000034621	Gpatch8	99	63.570	ENSGALG00000041556	GPATCH8	54	60.391	Gallus_gallus
ENSMUSG00000034621	Gpatch8	100	67.366	ENSGAGG00000008358	GPATCH8	55	62.871	Gopherus_agassizii
ENSMUSG00000034621	Gpatch8	100	86.631	ENSGGOG00000013860	GPATCH8	100	87.558	Gorilla_gorilla
ENSMUSG00000034621	Gpatch8	100	74.108	ENSHGLG00000017687	GPATCH8	55	67.780	Heterocephalus_glaber_female
ENSMUSG00000034621	Gpatch8	74	78.061	ENSHGLG00100010738	GPATCH8	97	78.231	Heterocephalus_glaber_male
ENSMUSG00000034621	Gpatch8	100	89.536	ENSSTOG00000025022	GPATCH8	100	89.470	Ictidomys_tridecemlineatus
ENSMUSG00000034621	Gpatch8	100	88.675	ENSJJAG00000017797	Gpatch8	100	88.742	Jaculus_jaculus
ENSMUSG00000034621	Gpatch8	51	57.088	ENSLACG00000017530	GPATCH8	55	55.464	Latimeria_chalumnae
ENSMUSG00000034621	Gpatch8	85	86.630	ENSLAFG00000032250	GPATCH8	100	86.630	Loxodonta_africana
ENSMUSG00000034621	Gpatch8	100	88.882	ENSMFAG00000039126	GPATCH8	100	90.007	Macaca_fascicularis
ENSMUSG00000034621	Gpatch8	100	88.882	ENSMMUG00000012658	GPATCH8	100	90.007	Macaca_mulatta
ENSMUSG00000034621	Gpatch8	100	88.948	ENSMNEG00000031426	GPATCH8	100	90.073	Macaca_nemestrina
ENSMUSG00000034621	Gpatch8	100	88.882	ENSMLEG00000038860	GPATCH8	100	90.007	Mandrillus_leucophaeus
ENSMUSG00000034621	Gpatch8	100	92.625	ENSMAUG00000021770	Gpatch8	100	91.362	Mesocricetus_auratus
ENSMUSG00000034621	Gpatch8	100	88.543	ENSMICG00000028586	GPATCH8	100	87.815	Microcebus_murinus
ENSMUSG00000034621	Gpatch8	100	91.247	ENSMOCG00000001658	Gpatch8	100	91.247	Microtus_ochrogaster
ENSMUSG00000034621	Gpatch8	100	98.340	MGP_CAROLIEiJ_G0017255	Gpatch8	100	98.340	Mus_caroli
ENSMUSG00000034621	Gpatch8	100	97.152	MGP_PahariEiJ_G0018385	Gpatch8	100	97.152	Mus_pahari
ENSMUSG00000034621	Gpatch8	100	99.205	MGP_SPRETEiJ_G0018098	Gpatch8	100	99.205	Mus_spretus
ENSMUSG00000034621	Gpatch8	100	87.823	ENSMPUG00000009274	GPATCH8	100	88.882	Mustela_putorius_furo
ENSMUSG00000034621	Gpatch8	93	95.270	ENSMLUG00000013840	GPATCH8	99	95.270	Myotis_lucifugus
ENSMUSG00000034621	Gpatch8	100	91.512	ENSNGAG00000021860	Gpatch8	100	91.114	Nannospalax_galili
ENSMUSG00000034621	Gpatch8	78	75.678	ENSMEUG00000011799	GPATCH8	100	75.424	Notamacropus_eugenii
ENSMUSG00000034621	Gpatch8	100	79.351	ENSOPRG00000008816	GPATCH8	100	79.219	Ochotona_princeps
ENSMUSG00000034621	Gpatch8	100	85.960	ENSOCUG00000003291	GPATCH8	100	87.682	Oryctolagus_cuniculus
ENSMUSG00000034621	Gpatch8	97	88.503	ENSOGAG00000033643	GPATCH8	100	87.687	Otolemur_garnettii
ENSMUSG00000034621	Gpatch8	100	82.750	ENSOARG00000008370	GPATCH8	100	84.931	Ovis_aries
ENSMUSG00000034621	Gpatch8	100	88.617	ENSPPAG00000040523	GPATCH8	100	89.477	Pan_paniscus
ENSMUSG00000034621	Gpatch8	100	88.484	ENSPPRG00000023310	GPATCH8	100	89.543	Panthera_pardus
ENSMUSG00000034621	Gpatch8	100	86.698	ENSPTIG00000020001	GPATCH8	100	87.558	Panthera_tigris_altaica
ENSMUSG00000034621	Gpatch8	100	88.617	ENSPTRG00000009278	GPATCH8	100	89.543	Pan_troglodytes
ENSMUSG00000034621	Gpatch8	100	88.815	ENSPANG00000021304	GPATCH8	100	89.940	Papio_anubis
ENSMUSG00000034621	Gpatch8	100	92.757	ENSPEMG00000008337	Gpatch8	100	93.156	Peromyscus_maniculatus_bairdii
ENSMUSG00000034621	Gpatch8	100	88.815	ENSPPYG00000008329	GPATCH8	100	89.080	Pongo_abelii
ENSMUSG00000034621	Gpatch8	77	100.000	ENSPCAG00000004441	GPATCH8	77	100.000	Procavia_capensis
ENSMUSG00000034621	Gpatch8	100	86.490	ENSPCOG00000019209	GPATCH8	100	85.762	Propithecus_coquereli
ENSMUSG00000034621	Gpatch8	100	87.690	ENSPVAG00000003155	GPATCH8	100	88.484	Pteropus_vampyrus
ENSMUSG00000034621	Gpatch8	100	93.865	ENSRNOG00000021044	Gpatch8	100	92.612	Rattus_norvegicus
ENSMUSG00000034621	Gpatch8	100	88.948	ENSRBIG00000033713	GPATCH8	100	89.874	Rhinopithecus_bieti
ENSMUSG00000034621	Gpatch8	100	88.948	ENSRROG00000029623	GPATCH8	100	89.874	Rhinopithecus_roxellana
ENSMUSG00000034621	Gpatch8	100	88.617	ENSSBOG00000023544	GPATCH8	100	89.543	Saimiri_boliviensis_boliviensis
ENSMUSG00000034621	Gpatch8	100	79.315	ENSSHAG00000016140	GPATCH8	100	76.877	Sarcophilus_harrisii
ENSMUSG00000034621	Gpatch8	100	85.175	ENSSARG00000007516	GPATCH8	100	84.712	Sorex_araneus
ENSMUSG00000034621	Gpatch8	100	89.477	ENSSSCG00000017357	ITGA2B	100	89.532	Sus_scrofa
ENSMUSG00000034621	Gpatch8	91	96.262	ENSTBEG00000009486	GPATCH8	91	96.262	Tupaia_belangeri
ENSMUSG00000034621	Gpatch8	99	84.836	ENSTTRG00000010527	GPATCH8	100	85.170	Tursiops_truncatus
ENSMUSG00000034621	Gpatch8	95	85.345	ENSUMAG00000013891	GPATCH8	100	86.392	Ursus_maritimus
ENSMUSG00000034621	Gpatch8	90	87.518	ENSVPAG00000006937	GPATCH8	99	87.153	Vicugna_pacos
ENSMUSG00000034621	Gpatch8	100	88.551	ENSVVUG00000017996	GPATCH8	100	89.543	Vulpes_vulpes

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0005515	protein binding	9185665.	IPI	Function
GO:0008150	biological_process	-	ND	Process
GO:0046872	metal ion binding	-	IEA	Function