EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000034724 (Gene tree)
Gene ID: 231464
Gene Symbol: Cnot6l
Alias: 4932442K20Rik
Full Name: CCR4-NOT transcription complex%2C subunit 6-like
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 93839 bases
Position: chr5:96070333-96164171
Accession: 2443154
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000119415	Exo_endo_phos	PF03372.23	5.7e-22	1	1
ENSMUSP00000108629	Exo_endo_phos	PF03372.23	5.9e-22	1	1
ENSMUSP00000113821	Exo_endo_phos	PF03372.23	1.2e-13	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000152490	-	3040	-	-	- (aa)	-	-
ENSMUST00000154500	-	232	-	ENSMUSP00000116326	55 (aa)	-	D3Z5R3
ENSMUST00000113005	-	3170	-	ENSMUSP00000108629	555 (aa)	-	Q8VEG6
ENSMUST00000155901	-	8564	XM_006534870	ENSMUSP00000119415	550 (aa)	XP_006534933	Q8VEG6
ENSMUST00000129646	-	526	-	ENSMUSP00000123653	130 (aa)	-	D3YXZ0
ENSMUST00000122003	-	2089	-	ENSMUSP00000113821	435 (aa)	-	Q8VEG6
ENSMUST00000141383	-	329	-	ENSMUSP00000114436	99 (aa)	-	D3YVH6
ENSMUST00000036646	-	3314	-	ENSMUSP00000047522	46 (aa)	-	F8WJG1
ENSMUST00000137066	-	782	-	-	- (aa)	-	-
ENSMUST00000137207	-	421	-	ENSMUSP00000121627	87 (aa)	-	D3Z2G5

Gene Model

Click here to download ENSMUSG00000034724's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000034724's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000034724	Cnot6l	100	77.355	ENSMUSG00000020362	Cnot6	100	77.355

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000034724	Cnot6l	100	98.018	ENSG00000138767	CNOT6L	100	98.018	Homo_sapiens
ENSMUSG00000034724	Cnot6l	99	84.862	ENSAPOG00000005894	cnot6l	100	83.243	Acanthochromis_polyacanthus
ENSMUSG00000034724	Cnot6l	100	98.000	ENSAMEG00000005570	CNOT6L	99	98.014	Ailuropoda_melanoleuca
ENSMUSG00000034724	Cnot6l	99	85.550	ENSACIG00000002515	cnot6l	100	83.784	Amphilophus_citrinellus
ENSMUSG00000034724	Cnot6l	99	80.734	ENSAOCG00000006705	cnot6l	100	80.000	Amphiprion_ocellaris
ENSMUSG00000034724	Cnot6l	99	81.336	ENSAPEG00000020035	cnot6l	100	80.470	Amphiprion_percula
ENSMUSG00000034724	Cnot6l	99	85.550	ENSATEG00000008774	cnot6l	100	83.964	Anabas_testudineus
ENSMUSG00000034724	Cnot6l	100	94.784	ENSAPLG00000003448	CNOT6L	100	94.784	Anas_platyrhynchos
ENSMUSG00000034724	Cnot6l	99	94.700	ENSACAG00000012099	CNOT6L	99	93.625	Anolis_carolinensis
ENSMUSG00000034724	Cnot6l	100	98.018	ENSANAG00000023917	CNOT6L	100	98.018	Aotus_nancymaae
ENSMUSG00000034724	Cnot6l	99	84.174	ENSACLG00000000879	cnot6l	100	82.162	Astatotilapia_calliptera
ENSMUSG00000034724	Cnot6l	99	83.486	ENSAMXG00000008943	cnot6l	98	81.522	Astyanax_mexicanus
ENSMUSG00000034724	Cnot6l	100	98.018	ENSBTAG00000049571	CNOT6L	100	98.018	Bos_taurus
ENSMUSG00000034724	Cnot6l	100	98.198	ENSCJAG00000014846	CNOT6L	100	98.198	Callithrix_jacchus
ENSMUSG00000034724	Cnot6l	100	98.182	ENSCAFG00000008699	CNOT6L	99	98.195	Canis_familiaris
ENSMUSG00000034724	Cnot6l	100	96.727	ENSCAFG00020011108	CNOT6L	100	96.727	Canis_lupus_dingo
ENSMUSG00000034724	Cnot6l	100	98.018	ENSCHIG00000006297	CNOT6L	100	98.018	Capra_hircus
ENSMUSG00000034724	Cnot6l	100	98.000	ENSTSYG00000009068	CNOT6L	100	98.000	Carlito_syrichta
ENSMUSG00000034724	Cnot6l	86	100.000	ENSCPOG00000010337	CNOT6L	100	100.000	Cavia_porcellus
ENSMUSG00000034724	Cnot6l	100	98.018	ENSCCAG00000025000	CNOT6L	100	98.018	Cebus_capucinus
ENSMUSG00000034724	Cnot6l	100	98.018	ENSCATG00000029623	CNOT6L	100	98.018	Cercocebus_atys
ENSMUSG00000034724	Cnot6l	100	97.455	ENSCLAG00000004598	CNOT6L	100	97.468	Chinchilla_lanigera
ENSMUSG00000034724	Cnot6l	100	98.018	ENSCSAG00000004580	CNOT6L	100	98.018	Chlorocebus_sabaeus
ENSMUSG00000034724	Cnot6l	74	100.000	ENSCHOG00000001108	-	70	100.000	Choloepus_hoffmanni
ENSMUSG00000034724	Cnot6l	100	96.364	ENSCPBG00000019403	CNOT6L	100	96.364	Chrysemys_picta_bellii
ENSMUSG00000034724	Cnot6l	100	98.018	ENSCANG00000028583	CNOT6L	100	98.018	Colobus_angolensis_palliatus
ENSMUSG00000034724	Cnot6l	100	100.000	ENSCGRG00001022099	Cnot6l	100	100.000	Cricetulus_griseus_chok1gshd
ENSMUSG00000034724	Cnot6l	100	99.273	ENSCGRG00000000543	Cnot6l	100	99.273	Cricetulus_griseus_crigri
ENSMUSG00000034724	Cnot6l	99	82.798	ENSCSEG00000014001	cnot6l	100	80.901	Cynoglossus_semilaevis
ENSMUSG00000034724	Cnot6l	96	80.907	ENSCSEG00000010395	-	98	80.907	Cynoglossus_semilaevis
ENSMUSG00000034724	Cnot6l	99	86.009	ENSCVAG00000021683	cnot6l	95	85.150	Cyprinodon_variegatus
ENSMUSG00000034724	Cnot6l	99	84.404	ENSDARG00000054597	cnot6l	98	82.696	Danio_rerio
ENSMUSG00000034724	Cnot6l	100	88.267	ENSDNOG00000004229	CNOT6L	99	98.131	Dasypus_novemcinctus
ENSMUSG00000034724	Cnot6l	100	88.727	ENSDORG00000011458	Cnot6l	100	88.727	Dipodomys_ordii
ENSMUSG00000034724	Cnot6l	100	70.515	ENSEBUG00000004849	cnot6l	100	69.627	Eptatretus_burgeri
ENSMUSG00000034724	Cnot6l	99	97.696	ENSEASG00005016429	CNOT6L	92	97.732	Equus_asinus_asinus
ENSMUSG00000034724	Cnot6l	99	97.696	ENSECAG00000001582	CNOT6L	88	97.856	Equus_caballus
ENSMUSG00000034724	Cnot6l	99	83.486	ENSELUG00000013353	cnot6l	88	81.949	Esox_lucius
ENSMUSG00000034724	Cnot6l	100	98.198	ENSFCAG00000008322	CNOT6L	100	98.198	Felis_catus
ENSMUSG00000034724	Cnot6l	100	94.909	ENSFALG00000008515	CNOT6L	100	94.595	Ficedula_albicollis
ENSMUSG00000034724	Cnot6l	100	97.455	ENSFDAG00000007719	CNOT6L	95	97.473	Fukomys_damarensis
ENSMUSG00000034724	Cnot6l	100	75.583	ENSFHEG00000012364	cnot6l	100	75.943	Fundulus_heteroclitus
ENSMUSG00000034724	Cnot6l	96	62.381	ENSGMOG00000011077	-	99	62.253	Gadus_morhua
ENSMUSG00000034724	Cnot6l	99	73.272	ENSGMOG00000000730	cnot6l	100	71.546	Gadus_morhua
ENSMUSG00000034724	Cnot6l	100	95.818	ENSGALG00000010333	CNOT6L	91	95.479	Gallus_gallus
ENSMUSG00000034724	Cnot6l	99	84.174	ENSGAFG00000006105	cnot6l	98	84.023	Gambusia_affinis
ENSMUSG00000034724	Cnot6l	99	95.392	ENSGAGG00000008605	CNOT6L	93	95.417	Gopherus_agassizii
ENSMUSG00000034724	Cnot6l	100	98.000	ENSGGOG00000023412	CNOT6L	99	98.014	Gorilla_gorilla
ENSMUSG00000034724	Cnot6l	99	84.174	ENSHBUG00000004755	cnot6l	95	83.402	Haplochromis_burtoni
ENSMUSG00000034724	Cnot6l	100	97.636	ENSHGLG00000006452	CNOT6L	100	97.636	Heterocephalus_glaber_female
ENSMUSG00000034724	Cnot6l	100	97.636	ENSHGLG00100012384	CNOT6L	98	97.636	Heterocephalus_glaber_male
ENSMUSG00000034724	Cnot6l	99	78.211	ENSHCOG00000009512	cnot6l	94	75.786	Hippocampus_comes
ENSMUSG00000034724	Cnot6l	99	82.569	ENSIPUG00000009879	cnot6l	100	80.978	Ictalurus_punctatus
ENSMUSG00000034724	Cnot6l	100	98.000	ENSSTOG00000015293	CNOT6L	100	98.000	Ictidomys_tridecemlineatus
ENSMUSG00000034724	Cnot6l	100	98.727	ENSJJAG00000020583	Cnot6l	100	98.734	Jaculus_jaculus
ENSMUSG00000034724	Cnot6l	99	83.945	ENSKMAG00000004165	cnot6l	100	82.162	Kryptolebias_marmoratus
ENSMUSG00000034724	Cnot6l	99	82.759	ENSLBEG00000027202	cnot6l	100	81.193	Labrus_bergylta
ENSMUSG00000034724	Cnot6l	100	90.727	ENSLACG00000004684	CNOT6L	100	90.000	Latimeria_chalumnae
ENSMUSG00000034724	Cnot6l	100	83.666	ENSLOCG00000007420	cnot6l	93	83.063	Lepisosteus_oculatus
ENSMUSG00000034724	Cnot6l	100	98.018	ENSLAFG00000011449	CNOT6L	100	95.907	Loxodonta_africana
ENSMUSG00000034724	Cnot6l	100	98.018	ENSMFAG00000044296	CNOT6L	100	98.018	Macaca_fascicularis
ENSMUSG00000034724	Cnot6l	100	98.000	ENSMMUG00000045609	CNOT6L	99	98.011	Macaca_mulatta
ENSMUSG00000034724	Cnot6l	100	98.018	ENSMNEG00000041259	CNOT6L	100	98.018	Macaca_nemestrina
ENSMUSG00000034724	Cnot6l	100	98.000	ENSMLEG00000029198	CNOT6L	99	98.011	Mandrillus_leucophaeus
ENSMUSG00000034724	Cnot6l	99	86.009	ENSMAMG00000016954	cnot6l	94	85.338	Mastacembelus_armatus
ENSMUSG00000034724	Cnot6l	99	84.174	ENSMZEG00005020235	cnot6l	100	82.162	Maylandia_zebra
ENSMUSG00000034724	Cnot6l	100	95.818	ENSMGAG00000005144	CNOT6L	100	95.315	Meleagris_gallopavo
ENSMUSG00000034724	Cnot6l	100	97.658	ENSMICG00000017026	CNOT6L	100	97.658	Microcebus_murinus
ENSMUSG00000034724	Cnot6l	100	100.000	ENSMOCG00000009451	Cnot6l	100	100.000	Microtus_ochrogaster
ENSMUSG00000034724	Cnot6l	99	85.321	ENSMMOG00000014621	cnot6l	100	83.063	Mola_mola
ENSMUSG00000034724	Cnot6l	100	97.091	ENSMODG00000011744	CNOT6L	75	97.091	Monodelphis_domestica
ENSMUSG00000034724	Cnot6l	99	85.092	ENSMALG00000006354	cnot6l	96	84.774	Monopterus_albus
ENSMUSG00000034724	Cnot6l	100	100.000	MGP_CAROLIEiJ_G0027429	Cnot6l	100	100.000	Mus_caroli
ENSMUSG00000034724	Cnot6l	100	100.000	MGP_PahariEiJ_G0017207	Cnot6l	100	100.000	Mus_pahari
ENSMUSG00000034724	Cnot6l	100	100.000	MGP_SPRETEiJ_G0028426	Cnot6l	100	100.000	Mus_spretus
ENSMUSG00000034724	Cnot6l	95	93.511	ENSMPUG00000003895	CNOT6L	100	93.511	Mustela_putorius_furo
ENSMUSG00000034724	Cnot6l	93	97.276	ENSMLUG00000000936	CNOT6L	100	97.276	Myotis_lucifugus
ENSMUSG00000034724	Cnot6l	100	99.640	ENSNGAG00000019803	Cnot6l	100	99.640	Nannospalax_galili
ENSMUSG00000034724	Cnot6l	87	81.842	ENSNBRG00000016345	cnot6l	80	80.723	Neolamprologus_brichardi
ENSMUSG00000034724	Cnot6l	100	98.018	ENSNLEG00000028820	CNOT6L	100	98.018	Nomascus_leucogenys
ENSMUSG00000034724	Cnot6l	80	84.127	ENSMEUG00000009767	-	79	84.000	Notamacropus_eugenii
ENSMUSG00000034724	Cnot6l	100	97.636	ENSODEG00000004161	CNOT6L	99	97.653	Octodon_degus
ENSMUSG00000034724	Cnot6l	99	83.673	ENSONIG00000013992	cnot6l	97	81.786	Oreochromis_niloticus
ENSMUSG00000034724	Cnot6l	100	96.727	ENSOANG00000003561	CNOT6L	100	96.727	Ornithorhynchus_anatinus
ENSMUSG00000034724	Cnot6l	100	97.838	ENSOCUG00000002497	CNOT6L	100	97.838	Oryctolagus_cuniculus
ENSMUSG00000034724	Cnot6l	99	83.641	ENSORLG00000018874	cnot6l	100	81.193	Oryzias_latipes
ENSMUSG00000034724	Cnot6l	99	83.028	ENSOMEG00000010026	cnot6l	100	80.901	Oryzias_melastigma
ENSMUSG00000034724	Cnot6l	100	94.595	ENSOGAG00000012122	CNOT6L	100	94.595	Otolemur_garnettii
ENSMUSG00000034724	Cnot6l	100	98.018	ENSOARG00000017771	CNOT6L	100	98.018	Ovis_aries
ENSMUSG00000034724	Cnot6l	100	95.455	ENSPPAG00000030178	-	100	95.455	Pan_paniscus
ENSMUSG00000034724	Cnot6l	84	100.000	ENSPPAG00000034242	-	99	100.000	Pan_paniscus
ENSMUSG00000034724	Cnot6l	100	98.198	ENSPPRG00000008857	CNOT6L	100	98.198	Panthera_pardus
ENSMUSG00000034724	Cnot6l	100	98.198	ENSPTIG00000015698	CNOT6L	100	98.198	Panthera_tigris_altaica
ENSMUSG00000034724	Cnot6l	100	98.018	ENSPTRG00000016198	CNOT6L	100	98.018	Pan_troglodytes
ENSMUSG00000034724	Cnot6l	84	100.000	ENSPTRG00000045291	-	99	100.000	Pan_troglodytes
ENSMUSG00000034724	Cnot6l	100	98.018	ENSPANG00000007831	CNOT6L	100	98.018	Papio_anubis
ENSMUSG00000034724	Cnot6l	100	84.420	ENSPKIG00000002892	cnot6l	100	83.152	Paramormyrops_kingsleyae
ENSMUSG00000034724	Cnot6l	100	95.636	ENSPSIG00000016241	CNOT6L	100	95.315	Pelodiscus_sinensis
ENSMUSG00000034724	Cnot6l	99	80.963	ENSPMGG00000004021	cnot6l	99	78.650	Periophthalmus_magnuspinnatus
ENSMUSG00000034724	Cnot6l	100	100.000	ENSPEMG00000011554	Cnot6l	100	100.000	Peromyscus_maniculatus_bairdii
ENSMUSG00000034724	Cnot6l	99	71.812	ENSPMAG00000005706	cnot6l	96	72.610	Petromyzon_marinus
ENSMUSG00000034724	Cnot6l	100	96.364	ENSPCIG00000027504	-	100	96.364	Phascolarctos_cinereus
ENSMUSG00000034724	Cnot6l	99	85.550	ENSPFOG00000013163	cnot6l	100	83.423	Poecilia_formosa
ENSMUSG00000034724	Cnot6l	99	85.321	ENSPLAG00000019862	cnot6l	100	83.243	Poecilia_latipinna
ENSMUSG00000034724	Cnot6l	99	85.550	ENSPMEG00000015834	cnot6l	100	83.243	Poecilia_mexicana
ENSMUSG00000034724	Cnot6l	99	85.092	ENSPREG00000003561	cnot6l	100	83.423	Poecilia_reticulata
ENSMUSG00000034724	Cnot6l	100	98.000	ENSPPYG00000014869	CNOT6L	100	98.000	Pongo_abelii
ENSMUSG00000034724	Cnot6l	100	67.207	ENSPCAG00000016617	CNOT6L	95	67.207	Procavia_capensis
ENSMUSG00000034724	Cnot6l	100	98.018	ENSPCOG00000014669	CNOT6L	100	98.018	Propithecus_coquereli
ENSMUSG00000034724	Cnot6l	83	98.100	ENSPVAG00000002690	CNOT6L	79	98.100	Pteropus_vampyrus
ENSMUSG00000034724	Cnot6l	89	80.879	ENSPNYG00000006717	cnot6l	92	79.722	Pundamilia_nyererei
ENSMUSG00000034724	Cnot6l	99	83.945	ENSPNAG00000003537	cnot6l	98	82.065	Pygocentrus_nattereri
ENSMUSG00000034724	Cnot6l	100	100.000	ENSRNOG00000002075	Cnot6l	100	100.000	Rattus_norvegicus
ENSMUSG00000034724	Cnot6l	100	98.000	ENSRBIG00000027644	CNOT6L	100	98.011	Rhinopithecus_bieti
ENSMUSG00000034724	Cnot6l	100	98.182	ENSRROG00000031003	CNOT6L	100	98.182	Rhinopithecus_roxellana
ENSMUSG00000034724	Cnot6l	100	98.000	ENSSBOG00000028521	CNOT6L	100	98.000	Saimiri_boliviensis_boliviensis
ENSMUSG00000034724	Cnot6l	100	96.909	ENSSHAG00000006072	CNOT6L	100	96.577	Sarcophilus_harrisii
ENSMUSG00000034724	Cnot6l	100	82.609	ENSSFOG00015019044	cnot6l	100	82.609	Scleropages_formosus
ENSMUSG00000034724	Cnot6l	99	83.486	ENSSMAG00000015568	cnot6l	100	81.081	Scophthalmus_maximus
ENSMUSG00000034724	Cnot6l	99	86.009	ENSSDUG00000018426	cnot6l	100	83.784	Seriola_dumerili
ENSMUSG00000034724	Cnot6l	99	85.780	ENSSLDG00000000335	cnot6l	100	83.604	Seriola_lalandi_dorsalis
ENSMUSG00000034724	Cnot6l	100	95.273	ENSSPUG00000002016	CNOT6L	100	95.273	Sphenodon_punctatus
ENSMUSG00000034724	Cnot6l	99	85.550	ENSSPAG00000022932	cnot6l	100	83.784	Stegastes_partitus
ENSMUSG00000034724	Cnot6l	100	97.838	ENSSSCG00000008989	CNOT6L	100	97.838	Sus_scrofa
ENSMUSG00000034724	Cnot6l	100	95.273	ENSTGUG00000001737	-	100	94.955	Taeniopygia_guttata
ENSMUSG00000034724	Cnot6l	99	84.404	ENSTRUG00000004332	cnot6l	100	82.342	Takifugu_rubripes
ENSMUSG00000034724	Cnot6l	99	84.174	ENSTNIG00000016717	cnot6l	100	81.261	Tetraodon_nigroviridis
ENSMUSG00000034724	Cnot6l	99	92.166	ENSTBEG00000016519	CNOT6L	97	92.754	Tupaia_belangeri
ENSMUSG00000034724	Cnot6l	99	97.235	ENSTTRG00000005606	CNOT6L	100	97.101	Tursiops_truncatus
ENSMUSG00000034724	Cnot6l	100	98.000	ENSUAMG00000026982	CNOT6L	100	98.000	Ursus_americanus
ENSMUSG00000034724	Cnot6l	100	98.018	ENSUMAG00000007955	CNOT6L	100	98.018	Ursus_maritimus
ENSMUSG00000034724	Cnot6l	100	93.273	ENSVPAG00000010892	CNOT6L	100	93.309	Vicugna_pacos
ENSMUSG00000034724	Cnot6l	100	98.198	ENSVVUG00000024858	CNOT6L	100	98.561	Vulpes_vulpes
ENSMUSG00000034724	Cnot6l	100	89.091	ENSXETG00000000372	cnot6l	100	88.969	Xenopus_tropicalis
ENSMUSG00000034724	Cnot6l	99	84.633	ENSXMAG00000002900	cnot6l	100	82.883	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000288	nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay	17452450.	IMP	Process
GO:0004518	nuclease activity	-	IEA	Function
GO:0004527	exonuclease activity	-	IEA	Function
GO:0004535	poly(A)-specific ribonuclease activity	17452450.	IMP	Function
GO:0005515	protein binding	17452450.20133598.21897366.	IPI	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005737	cytoplasm	17452450.	IDA	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0005829	cytosol	-	ISO	Component
GO:0006397	mRNA processing	-	IEA	Process
GO:0006417	regulation of translation	-	IEA	Process
GO:0008284	positive regulation of cell proliferation	17452450.	IMP	Process
GO:0008284	positive regulation of cell proliferation	-	ISO	Process
GO:0010606	positive regulation of cytoplasmic mRNA processing body assembly	-	ISO	Process
GO:0016787	hydrolase activity	-	IEA	Function
GO:0030014	CCR4-NOT complex	-	ISO	Component
GO:0031047	gene silencing by RNA	-	IEA	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:0061157	mRNA destabilization	17452450.	IMP	Process