EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000034839 (Gene tree)
Gene ID: 67557
Gene Symbol: Larp6
Alias: 5430431G03Rik|Achn|acheron
Full Name: La ribonucleoprotein domain family%2C member 6
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 25813 bases
Position: chr9:60712989-60738801
Accession: 1914807
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000040309	La	PF05383.17	2.6e-20	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000038407	-	2440	-	ENSMUSP00000040309	492 (aa)	-	Q8BN59

Gene Model

Click here to download ENSMUSG00000034839's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000034839's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000034839	Larp6	100	91.057	ENSG00000166173	LARP6	100	96.774	Homo_sapiens
ENSMUSG00000034839	Larp6	95	57.320	ENSAPOG00000021773	larp6a	63	59.101	Acanthochromis_polyacanthus
ENSMUSG00000034839	Larp6	87	92.056	ENSAMEG00000008897	LARP6	100	92.056	Ailuropoda_melanoleuca
ENSMUSG00000034839	Larp6	97	57.809	ENSACIG00000005166	larp6a	87	58.278	Amphilophus_citrinellus
ENSMUSG00000034839	Larp6	95	57.320	ENSAOCG00000002284	larp6a	63	59.101	Amphiprion_ocellaris
ENSMUSG00000034839	Larp6	95	57.320	ENSAPEG00000008077	larp6a	84	59.101	Amphiprion_percula
ENSMUSG00000034839	Larp6	95	56.907	ENSATEG00000004018	larp6a	62	58.202	Anabas_testudineus
ENSMUSG00000034839	Larp6	85	71.158	ENSAPLG00000009914	LARP6	99	71.158	Anas_platyrhynchos
ENSMUSG00000034839	Larp6	84	68.510	ENSACAG00000008613	LARP6	98	68.750	Anolis_carolinensis
ENSMUSG00000034839	Larp6	100	91.057	ENSANAG00000024860	LARP6	100	91.057	Aotus_nancymaae
ENSMUSG00000034839	Larp6	97	57.606	ENSACLG00000018561	larp6a	62	58.057	Astatotilapia_calliptera
ENSMUSG00000034839	Larp6	90	57.174	ENSAMXG00000029387	larp6a	68	57.768	Astyanax_mexicanus
ENSMUSG00000034839	Larp6	85	41.244	ENSAMXG00000036816	-	93	41.787	Astyanax_mexicanus
ENSMUSG00000034839	Larp6	100	89.634	ENSBTAG00000003915	LARP6	100	89.634	Bos_taurus
ENSMUSG00000034839	Larp6	100	90.447	ENSCJAG00000046236	-	100	90.447	Callithrix_jacchus
ENSMUSG00000034839	Larp6	100	90.854	ENSCJAG00000018642	-	100	90.854	Callithrix_jacchus
ENSMUSG00000034839	Larp6	86	92.925	ENSCAFG00000017616	LARP6	99	92.925	Canis_familiaris
ENSMUSG00000034839	Larp6	100	89.837	ENSCAFG00020007296	LARP6	100	90.244	Canis_lupus_dingo
ENSMUSG00000034839	Larp6	100	89.837	ENSCHIG00000013742	LARP6	100	89.837	Capra_hircus
ENSMUSG00000034839	Larp6	86	91.981	ENSTSYG00000028124	LARP6	87	91.981	Carlito_syrichta
ENSMUSG00000034839	Larp6	86	90.118	ENSCAPG00000015452	LARP6	100	90.118	Cavia_aperea
ENSMUSG00000034839	Larp6	100	88.032	ENSCPOG00000022687	LARP6	100	88.032	Cavia_porcellus
ENSMUSG00000034839	Larp6	100	90.650	ENSCCAG00000036320	LARP6	100	90.650	Cebus_capucinus
ENSMUSG00000034839	Larp6	100	90.854	ENSCATG00000042432	LARP6	100	90.854	Cercocebus_atys
ENSMUSG00000034839	Larp6	100	91.278	ENSCLAG00000007893	LARP6	100	91.278	Chinchilla_lanigera
ENSMUSG00000034839	Larp6	100	91.057	ENSCSAG00000013672	LARP6	100	91.057	Chlorocebus_sabaeus
ENSMUSG00000034839	Larp6	97	89.308	ENSCHOG00000003318	LARP6	100	89.121	Choloepus_hoffmanni
ENSMUSG00000034839	Larp6	89	70.252	ENSCPBG00000010771	LARP6	84	70.252	Chrysemys_picta_bellii
ENSMUSG00000034839	Larp6	86	93.396	ENSCANG00000025833	LARP6	99	93.396	Colobus_angolensis_palliatus
ENSMUSG00000034839	Larp6	100	95.325	ENSCGRG00001024472	Larp6	100	95.325	Cricetulus_griseus_chok1gshd
ENSMUSG00000034839	Larp6	100	95.325	ENSCGRG00000004527	Larp6	100	95.325	Cricetulus_griseus_crigri
ENSMUSG00000034839	Larp6	95	57.438	ENSCSEG00000011196	larp6a	65	57.658	Cynoglossus_semilaevis
ENSMUSG00000034839	Larp6	88	58.370	ENSCVAG00000009605	larp6a	66	58.370	Cyprinodon_variegatus
ENSMUSG00000034839	Larp6	87	57.812	ENSDARG00000005355	larp6a	96	60.706	Danio_rerio
ENSMUSG00000034839	Larp6	100	89.024	ENSDNOG00000042993	LARP6	100	89.228	Dasypus_novemcinctus
ENSMUSG00000034839	Larp6	100	81.377	ENSDORG00000023910	Larp6	100	80.769	Dipodomys_ordii
ENSMUSG00000034839	Larp6	79	90.400	ENSETEG00000020390	LARP6	78	87.023	Echinops_telfairi
ENSMUSG00000034839	Larp6	100	91.463	ENSEASG00005005490	LARP6	73	91.463	Equus_asinus_asinus
ENSMUSG00000034839	Larp6	100	91.260	ENSECAG00000014190	LARP6	100	91.260	Equus_caballus
ENSMUSG00000034839	Larp6	88	57.642	ENSELUG00000007341	larp6a	66	57.205	Esox_lucius
ENSMUSG00000034839	Larp6	100	90.650	ENSFCAG00000001361	LARP6	100	90.650	Felis_catus
ENSMUSG00000034839	Larp6	88	68.409	ENSFALG00000012389	LARP6	99	64.792	Ficedula_albicollis
ENSMUSG00000034839	Larp6	100	83.333	ENSFDAG00000019994	LARP6	86	90.909	Fukomys_damarensis
ENSMUSG00000034839	Larp6	88	58.370	ENSFHEG00000010312	larp6a	64	57.709	Fundulus_heteroclitus
ENSMUSG00000034839	Larp6	89	70.295	ENSGALG00000004046	LARP6	89	70.295	Gallus_gallus
ENSMUSG00000034839	Larp6	88	58.590	ENSGAFG00000009426	larp6a	65	58.969	Gambusia_affinis
ENSMUSG00000034839	Larp6	86	59.039	ENSGACG00000014622	larp6a	97	58.124	Gasterosteus_aculeatus
ENSMUSG00000034839	Larp6	80	70.707	ENSGAGG00000010802	LARP6	58	70.707	Gopherus_agassizii
ENSMUSG00000034839	Larp6	86	93.632	ENSGGOG00000024151	LARP6	99	93.853	Gorilla_gorilla
ENSMUSG00000034839	Larp6	97	57.606	ENSHBUG00000021014	larp6a	62	58.057	Haplochromis_burtoni
ENSMUSG00000034839	Larp6	100	89.899	ENSHGLG00000015112	LARP6	100	89.899	Heterocephalus_glaber_female
ENSMUSG00000034839	Larp6	86	93.396	ENSHGLG00100013159	LARP6	99	93.396	Heterocephalus_glaber_male
ENSMUSG00000034839	Larp6	97	55.711	ENSHCOG00000001241	larp6a	86	57.930	Hippocampus_comes
ENSMUSG00000034839	Larp6	86	59.101	ENSIPUG00000010187	larp6	65	60.046	Ictalurus_punctatus
ENSMUSG00000034839	Larp6	85	38.208	ENSIPUG00000002828	-	98	37.609	Ictalurus_punctatus
ENSMUSG00000034839	Larp6	94	92.191	ENSSTOG00000024279	LARP6	99	92.544	Ictidomys_tridecemlineatus
ENSMUSG00000034839	Larp6	100	88.618	ENSJJAG00000011013	Larp6	100	88.821	Jaculus_jaculus
ENSMUSG00000034839	Larp6	89	59.211	ENSKMAG00000001702	larp6a	61	58.333	Kryptolebias_marmoratus
ENSMUSG00000034839	Larp6	95	55.236	ENSLBEG00000000170	larp6a	84	56.823	Labrus_bergylta
ENSMUSG00000034839	Larp6	85	40.972	ENSLACG00000002786	-	98	43.868	Latimeria_chalumnae
ENSMUSG00000034839	Larp6	97	64.583	ENSLACG00000018706	LARP6	90	63.542	Latimeria_chalumnae
ENSMUSG00000034839	Larp6	96	59.213	ENSLOCG00000014592	larp6a	69	59.016	Lepisosteus_oculatus
ENSMUSG00000034839	Larp6	84	45.561	ENSLOCG00000008547	-	82	43.692	Lepisosteus_oculatus
ENSMUSG00000034839	Larp6	91	91.051	ENSLAFG00000016343	LARP6	100	91.051	Loxodonta_africana
ENSMUSG00000034839	Larp6	91	93.556	ENSMFAG00000035507	LARP6	100	93.556	Macaca_fascicularis
ENSMUSG00000034839	Larp6	100	89.024	ENSMMUG00000004429	LARP6	100	89.024	Macaca_mulatta
ENSMUSG00000034839	Larp6	100	91.057	ENSMNEG00000045335	LARP6	100	91.057	Macaca_nemestrina
ENSMUSG00000034839	Larp6	86	93.396	ENSMLEG00000038587	LARP6	99	93.396	Mandrillus_leucophaeus
ENSMUSG00000034839	Larp6	95	57.290	ENSMAMG00000005261	larp6a	62	58.389	Mastacembelus_armatus
ENSMUSG00000034839	Larp6	97	57.606	ENSMZEG00005005774	larp6a	62	58.057	Maylandia_zebra
ENSMUSG00000034839	Larp6	85	71.564	ENSMGAG00000005077	LARP6	99	71.564	Meleagris_gallopavo
ENSMUSG00000034839	Larp6	100	95.732	ENSMAUG00000018486	Larp6	100	95.732	Mesocricetus_auratus
ENSMUSG00000034839	Larp6	100	88.618	ENSMICG00000011234	LARP6	100	88.618	Microcebus_murinus
ENSMUSG00000034839	Larp6	100	95.325	ENSMOCG00000010492	Larp6	100	95.325	Microtus_ochrogaster
ENSMUSG00000034839	Larp6	95	58.058	ENSMMOG00000016284	larp6a	85	59.009	Mola_mola
ENSMUSG00000034839	Larp6	97	74.792	ENSMODG00000009034	LARP6	93	74.127	Monodelphis_domestica
ENSMUSG00000034839	Larp6	95	56.996	ENSMALG00000014439	larp6a	84	58.072	Monopterus_albus
ENSMUSG00000034839	Larp6	100	99.187	MGP_CAROLIEiJ_G0032314	Larp6	100	99.187	Mus_caroli
ENSMUSG00000034839	Larp6	100	97.967	MGP_PahariEiJ_G0015180	Larp6	100	97.967	Mus_pahari
ENSMUSG00000034839	Larp6	100	99.187	MGP_SPRETEiJ_G0033452	Larp6	100	99.187	Mus_spretus
ENSMUSG00000034839	Larp6	87	92.523	ENSMPUG00000017086	LARP6	100	92.523	Mustela_putorius_furo
ENSMUSG00000034839	Larp6	100	90.447	ENSMLUG00000010319	LARP6	100	90.447	Myotis_lucifugus
ENSMUSG00000034839	Larp6	100	90.041	ENSNGAG00000014238	Larp6	100	90.041	Nannospalax_galili
ENSMUSG00000034839	Larp6	97	57.404	ENSNBRG00000008120	larp6a	86	58.022	Neolamprologus_brichardi
ENSMUSG00000034839	Larp6	100	90.854	ENSNLEG00000013691	LARP6	100	90.650	Nomascus_leucogenys
ENSMUSG00000034839	Larp6	84	75.141	ENSMEUG00000002270	LARP6	97	65.560	Notamacropus_eugenii
ENSMUSG00000034839	Larp6	72	79.830	ENSOPRG00000004868	-	100	79.830	Ochotona_princeps
ENSMUSG00000034839	Larp6	100	87.424	ENSODEG00000015958	LARP6	100	87.424	Octodon_degus
ENSMUSG00000034839	Larp6	97	57.374	ENSONIG00000002901	larp6a	86	58.206	Oreochromis_niloticus
ENSMUSG00000034839	Larp6	86	82.353	ENSOCUG00000009306	LARP6	100	82.353	Oryctolagus_cuniculus
ENSMUSG00000034839	Larp6	95	57.732	ENSORLG00000014256	larp6a	86	59.685	Oryzias_latipes
ENSMUSG00000034839	Larp6	95	57.732	ENSORLG00020019657	larp6a	63	59.685	Oryzias_latipes_hni
ENSMUSG00000034839	Larp6	95	57.526	ENSORLG00015017915	larp6a	63	59.459	Oryzias_latipes_hsok
ENSMUSG00000034839	Larp6	95	58.144	ENSOMEG00000017049	larp6a	63	60.135	Oryzias_melastigma
ENSMUSG00000034839	Larp6	100	89.024	ENSOGAG00000000522	LARP6	100	89.024	Otolemur_garnettii
ENSMUSG00000034839	Larp6	87	90.421	ENSOARG00000018750	LARP6	99	90.421	Ovis_aries
ENSMUSG00000034839	Larp6	86	93.632	ENSPPAG00000031247	LARP6	99	93.853	Pan_paniscus
ENSMUSG00000034839	Larp6	100	90.041	ENSPPRG00000011282	LARP6	100	90.041	Panthera_pardus
ENSMUSG00000034839	Larp6	86	91.962	ENSPTIG00000015318	LARP6	86	91.962	Panthera_tigris_altaica
ENSMUSG00000034839	Larp6	100	91.057	ENSPTRG00000007234	LARP6	100	91.057	Pan_troglodytes
ENSMUSG00000034839	Larp6	100	91.057	ENSPANG00000016362	LARP6	100	91.057	Papio_anubis
ENSMUSG00000034839	Larp6	98	57.606	ENSPKIG00000020103	larp6a	84	59.284	Paramormyrops_kingsleyae
ENSMUSG00000034839	Larp6	97	56.287	ENSPKIG00000004511	LARP6	67	56.957	Paramormyrops_kingsleyae
ENSMUSG00000034839	Larp6	62	80.769	ENSPSIG00000009071	LARP6	91	74.783	Pelodiscus_sinensis
ENSMUSG00000034839	Larp6	95	57.938	ENSPMGG00000006958	larp6a	86	59.101	Periophthalmus_magnuspinnatus
ENSMUSG00000034839	Larp6	100	95.122	ENSPEMG00000012909	Larp6	100	95.122	Peromyscus_maniculatus_bairdii
ENSMUSG00000034839	Larp6	97	75.833	ENSPCIG00000020765	LARP6	93	75.833	Phascolarctos_cinereus
ENSMUSG00000034839	Larp6	87	59.375	ENSPFOG00000014175	larp6a	84	59.375	Poecilia_formosa
ENSMUSG00000034839	Larp6	87	59.417	ENSPLAG00000011105	larp6a	64	59.031	Poecilia_latipinna
ENSMUSG00000034839	Larp6	87	59.193	ENSPMEG00000011085	larp6a	64	58.811	Poecilia_mexicana
ENSMUSG00000034839	Larp6	95	57.407	ENSPREG00000008067	larp6a	64	58.590	Poecilia_reticulata
ENSMUSG00000034839	Larp6	100	91.057	ENSPPYG00000006604	LARP6	100	91.057	Pongo_abelii
ENSMUSG00000034839	Larp6	65	92.216	ENSPCAG00000014197	LARP6	76	92.216	Procavia_capensis
ENSMUSG00000034839	Larp6	100	89.024	ENSPCOG00000022934	LARP6	100	89.024	Propithecus_coquereli
ENSMUSG00000034839	Larp6	100	89.634	ENSPVAG00000005618	LARP6	100	89.634	Pteropus_vampyrus
ENSMUSG00000034839	Larp6	97	57.404	ENSPNYG00000009835	larp6a	86	58.022	Pundamilia_nyererei
ENSMUSG00000034839	Larp6	97	55.823	ENSPNAG00000017966	larp6a	79	56.426	Pygocentrus_nattereri
ENSMUSG00000034839	Larp6	100	96.341	ENSRNOG00000012438	Larp6	100	96.341	Rattus_norvegicus
ENSMUSG00000034839	Larp6	98	89.278	ENSRBIG00000032902	LARP6	98	89.278	Rhinopithecus_bieti
ENSMUSG00000034839	Larp6	98	91.718	ENSRROG00000043074	LARP6	98	91.718	Rhinopithecus_roxellana
ENSMUSG00000034839	Larp6	86	93.160	ENSSBOG00000024190	LARP6	99	93.160	Saimiri_boliviensis_boliviensis
ENSMUSG00000034839	Larp6	87	75.467	ENSSHAG00000018495	LARP6	100	75.467	Sarcophilus_harrisii
ENSMUSG00000034839	Larp6	95	52.621	ENSSFOG00015002254	LARP6	83	55.835	Scleropages_formosus
ENSMUSG00000034839	Larp6	86	60.550	ENSSFOG00015023268	larp6a	84	60.599	Scleropages_formosus
ENSMUSG00000034839	Larp6	97	57.085	ENSSMAG00000009953	larp6a	63	58.150	Scophthalmus_maximus
ENSMUSG00000034839	Larp6	95	57.819	ENSSDUG00000007438	larp6a	62	58.969	Seriola_dumerili
ENSMUSG00000034839	Larp6	95	57.819	ENSSLDG00000016647	larp6a	62	58.969	Seriola_lalandi_dorsalis
ENSMUSG00000034839	Larp6	86	72.038	ENSSPUG00000011312	LARP6	99	72.038	Sphenodon_punctatus
ENSMUSG00000034839	Larp6	95	57.320	ENSSPAG00000020502	larp6a	62	59.101	Stegastes_partitus
ENSMUSG00000034839	Larp6	100	89.634	ENSSSCG00000004974	LARP6	100	89.634	Sus_scrofa
ENSMUSG00000034839	Larp6	85	69.668	ENSTGUG00000005808	LARP6	99	69.668	Taeniopygia_guttata
ENSMUSG00000034839	Larp6	96	56.855	ENSTRUG00000003151	larp6a	66	58.079	Takifugu_rubripes
ENSMUSG00000034839	Larp6	95	56.133	ENSTNIG00000011926	larp6a	88	57.466	Tetraodon_nigroviridis
ENSMUSG00000034839	Larp6	86	90.118	ENSTBEG00000015077	LARP6	100	90.118	Tupaia_belangeri
ENSMUSG00000034839	Larp6	99	82.822	ENSUAMG00000010467	LARP6	87	90.930	Ursus_americanus
ENSMUSG00000034839	Larp6	86	92.689	ENSVVUG00000015227	LARP6	94	92.689	Vulpes_vulpes
ENSMUSG00000034839	Larp6	96	65.336	ENSXETG00000020340	larp6	93	65.756	Xenopus_tropicalis
ENSMUSG00000034839	Larp6	87	59.193	ENSXCOG00000012654	larp6a	89	59.193	Xiphophorus_couchianus
ENSMUSG00000034839	Larp6	87	59.193	ENSXMAG00000021015	larp6a	60	59.193	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0005515	protein binding	19096764.	IPI	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0005844	polysome	-	ISO	Component
GO:0006396	RNA processing	-	IEA	Process
GO:0006417	regulation of translation	-	IEA	Process
GO:0017022	myosin binding	-	ISO	Function
GO:0032967	positive regulation of collagen biosynthetic process	-	ISO	Process
GO:0035613	RNA stem-loop binding	-	ISO	Function
GO:0045727	positive regulation of translation	-	ISO	Process
GO:0048027	mRNA 5'-UTR binding	-	ISO	Function
GO:1902416	positive regulation of mRNA binding	-	ISO	Process
GO:1990825	sequence-specific mRNA binding	-	ISO	Function
GO:1990904	ribonucleoprotein complex	-	ISO	Component