EuRBPDB

Description

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000219285	-	600	-	-	- (aa)	-	-
ENSMUST00000218120	-	666	-	ENSMUSP00000151248	222 (aa)	-	A0A1W2P6J2
ENSMUST00000050867	-	2715	-	ENSMUSP00000059533	772 (aa)	-	Q9CS00

Gene Model

Protein-Protein Interaction (PPI)

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000034889	Cactin	97	90.411	ENSG00000105298	CACTIN	99	98.571	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001933	negative regulation of protein phosphorylation	-	ISO	Process
GO:0002376	immune system process	-	IEA	Process
GO:0005634	nucleus	-	ISO	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005681	spliceosomal complex	-	IEA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0006397	mRNA processing	-	IEA	Process
GO:0007275	multicellular organism development	-	IEA	Process
GO:0008380	RNA splicing	-	IEA	Process
GO:0016607	nuclear speck	-	ISO	Component
GO:0031665	negative regulation of lipopolysaccharide-mediated signaling pathway	-	ISO	Process
GO:0032088	negative regulation of NF-kappaB transcription factor activity	-	ISO	Process
GO:0032688	negative regulation of interferon-beta production	-	ISO	Process
GO:0032717	negative regulation of interleukin-8 production	-	ISO	Process
GO:0032720	negative regulation of tumor necrosis factor production	-	ISO	Process
GO:0034122	negative regulation of toll-like receptor signaling pathway	-	ISO	Process
GO:0045087	innate immune response	-	IEA	Process
GO:0060339	negative regulation of type I interferon-mediated signaling pathway	-	ISO	Process
GO:0071013	catalytic step 2 spliceosome	-	ISO	Component
GO:0071222	cellular response to lipopolysaccharide	-	ISO	Process
GO:0071347	cellular response to interleukin-1	-	ISO	Process
GO:0071356	cellular response to tumor necrosis factor	-	ISO	Process