EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSMUSG00000034931 (Gene tree)
Gene ID
217207
Gene Symbol
Dhx8
Alias
Ddx8|RNA helicase|mDEAH6
Full Name
DEAH (Asp-Glu-Ala-His) box polypeptide 8
Gene Type
protein_coding
Species
Mus_musculus
Status
confidence
Strand
Plus strand
Length
34440 bases
Position
chr11:101732919-101767358
Accession
1306823
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMUSP00000119430S1PF00575.232e-1411
ENSMUSP00000037251S1PF00575.232.2e-1411
ENSMUSP00000119430HA2PF04408.234.3e-2411
ENSMUSP00000037251HA2PF04408.234.6e-2411
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
27768875High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem CellsnIC & mESC2016.09He CDOI: 10.1016/j.molcel.2016.09.034
27281784Identification of RNA binding Proteins in Macrophages by Interactome CaptureIC & RAW264.72016 Jun 8Liepelt ADOI: 10.1074/mcp.M115.056564
27452465The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart DiseaseIC & HL_12016 Jul 21Liao YDOI: 10.1016/j.celrep.2016.06.084
27452465The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart DiseaseRBDmap & HL_12016 Jul 21Liao YDOI: 10.1016/j.celrep.2016.06.084
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMUST00000156842-444--- (aa)--
ENSMUST00000039152-4325-ENSMUSP000000372511244 (aa)-A2A4P0
ENSMUST00000125409-675--- (aa)--
ENSMUST00000141461-658--- (aa)--
ENSMUST00000129741-3524-ENSMUSP000001194301174 (aa)-A2A4N9
Gene Model
Click here to download ENSMUSG00000034931's gene model file
Pathways
Pathway IDPathway NameSource
mmu03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000034931's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMUSG00000034931Dhx85552.366ENSMUSG00000029169Dhx158154.306
ENSMUSG00000034931Dhx85242.739ENSMUSG00000029480Dhx375942.623
ENSMUSG00000034931Dhx86947.031ENSMUSG00000037993Dhx386746.253
ENSMUSG00000034931Dhx85036.688ENSMUSG00000006019Dhx345336.688
ENSMUSG00000034931Dhx85232.361ENSMUSG00000027770Dhx367132.451
ENSMUSG00000034931Dhx85432.371ENSMUSG00000009145Dqx19132.371
ENSMUSG00000034931Dhx85140.201ENSMUSG00000035051Dhx575040.201
ENSMUSG00000034931Dhx85341.294ENSMUSG00000042426Dhx295241.294
ENSMUSG00000034931Dhx85343.645ENSMUSG00000018425Dhx409740.088
ENSMUSG00000034931Dhx85347.068ENSMUSG00000040620Dhx339047.068
ENSMUSG00000034931Dhx85433.133ENSMUSG00000030986Dhx329433.219
ENSMUSG00000034931Dhx85647.392ENSMUSG00000027655Dhx359547.392
ENSMUSG00000034931Dhx85458.954ENSMUSG00000024422Dhx166058.954
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMUSG00000034931Dhx810096.704ENSG00000067596DHX810096.785Homo_sapiens
ENSMUSG00000034931Dhx88094.595ENSAPOG00000018162dhx89983.320Acanthochromis_polyacanthus
ENSMUSG00000034931Dhx89995.527ENSAMEG00000018294DHX810095.767Ailuropoda_melanoleuca
ENSMUSG00000034931Dhx89985.819ENSACIG00000013170dhx89985.714Amphilophus_citrinellus
ENSMUSG00000034931Dhx89987.144ENSAOCG00000006439dhx89887.500Amphiprion_ocellaris
ENSMUSG00000034931Dhx89986.900ENSAPEG00000005641dhx89395.361Amphiprion_percula
ENSMUSG00000034931Dhx89892.788ENSATEG00000007660dhx89792.788Anabas_testudineus
ENSMUSG00000034931Dhx87997.963ENSAPLG00000002788DHX88197.413Anas_platyrhynchos
ENSMUSG00000034931Dhx89990.465ENSACAG00000013509DHX89990.872Anolis_carolinensis
ENSMUSG00000034931Dhx810095.997ENSANAG00000030580DHX810096.061Aotus_nancymaae
ENSMUSG00000034931Dhx88992.734ENSACLG00000024759dhx89295.542Astatotilapia_calliptera
ENSMUSG00000034931Dhx89195.876ENSAMXG00000009430dhx88395.876Astyanax_mexicanus
ENSMUSG00000034931Dhx810096.141ENSBTAG00000008339DHX810095.900Bos_taurus
ENSMUSG00000034931Dhx88069.360WBGene00003393mog-58466.273Caenorhabditis_elegans
ENSMUSG00000034931Dhx810096.061ENSCJAG00000010659-10096.222Callithrix_jacchus
ENSMUSG00000034931Dhx810095.981ENSCAFG00000014556DHX810096.061Canis_familiaris
ENSMUSG00000034931Dhx810095.981ENSCAFG00020012922DHX810096.271Canis_lupus_dingo
ENSMUSG00000034931Dhx810095.820ENSCHIG00000009291DHX810095.900Capra_hircus
ENSMUSG00000034931Dhx810095.820ENSTSYG00000008782DHX810096.061Carlito_syrichta
ENSMUSG00000034931Dhx89694.482ENSCAPG00000005701DHX89894.565Cavia_aperea
ENSMUSG00000034931Dhx810094.217ENSCPOG00000000224DHX810094.297Cavia_porcellus
ENSMUSG00000034931Dhx810096.061ENSCCAG00000021748DHX810096.222Cebus_capucinus
ENSMUSG00000034931Dhx810096.704ENSCATG00000043128DHX810096.865Cercocebus_atys
ENSMUSG00000034931Dhx810094.699ENSCLAG00000016045DHX810094.699Chinchilla_lanigera
ENSMUSG00000034931Dhx88196.912ENSCSAG00000003443DHX89989.512Chlorocebus_sabaeus
ENSMUSG00000034931Dhx89988.316ENSCHOG00000009720DHX810088.638Choloepus_hoffmanni
ENSMUSG00000034931Dhx87781.432ENSCING00000001546-8180.705Ciona_intestinalis
ENSMUSG00000034931Dhx88081.607ENSCSAVG00000002918-9280.440Ciona_savignyi
ENSMUSG00000034931Dhx810094.775ENSCANG00000031479DHX810094.855Colobus_angolensis_palliatus
ENSMUSG00000034931Dhx810098.473ENSCGRG00001021413Dhx810098.312Cricetulus_griseus_chok1gshd
ENSMUSG00000034931Dhx88094.094ENSCSEG00000015029dhx88195.301Cynoglossus_semilaevis
ENSMUSG00000034931Dhx89091.900ENSCVAG00000006188dhx89295.339Cyprinodon_variegatus
ENSMUSG00000034931Dhx89093.529ENSDARG00000054707dhx89293.180Danio_rerio
ENSMUSG00000034931Dhx810095.299ENSDNOG00000013606DHX810095.538Dasypus_novemcinctus
ENSMUSG00000034931Dhx810093.569ENSDORG00000013845Dhx810093.489Dipodomys_ordii
ENSMUSG00000034931Dhx88877.325FBgn0086895pea8676.249Drosophila_melanogaster
ENSMUSG00000034931Dhx87099.583ENSETEG00000010986DHX87299.583Echinops_telfairi
ENSMUSG00000034931Dhx89574.547ENSEBUG00000001680dhx88083.120Eptatretus_burgeri
ENSMUSG00000034931Dhx810096.704ENSEASG00005010097DHX810096.785Equus_asinus_asinus
ENSMUSG00000034931Dhx810096.865ENSECAG00000019601DHX810096.945Equus_caballus
ENSMUSG00000034931Dhx87799.716ENSEEUG00000004835-7899.716Erinaceus_europaeus
ENSMUSG00000034931Dhx88194.223ENSELUG00000007955dhx88494.848Esox_lucius
ENSMUSG00000034931Dhx810096.543ENSFCAG00000009908DHX810096.704Felis_catus
ENSMUSG00000034931Dhx810092.450ENSFDAG00000017832-8398.310Fukomys_damarensis
ENSMUSG00000034931Dhx89294.294ENSFHEG00000012389dhx89395.316Fundulus_heteroclitus
ENSMUSG00000034931Dhx87891.740ENSGMOG00000016045dhx88491.740Gadus_morhua
ENSMUSG00000034931Dhx89293.591ENSGMOG00000016093dhx89494.619Gadus_morhua
ENSMUSG00000034931Dhx88994.970ENSGAFG00000012510dhx88195.339Gambusia_affinis
ENSMUSG00000034931Dhx89677.231ENSGACG00000003736dhx88585.729Gasterosteus_aculeatus
ENSMUSG00000034931Dhx89387.056ENSGACG00000003750dhx88994.898Gasterosteus_aculeatus
ENSMUSG00000034931Dhx810096.543ENSGGOG00000000143DHX810096.624Gorilla_gorilla
ENSMUSG00000034931Dhx88594.795ENSHBUG00000005644dhx89195.542Haplochromis_burtoni
ENSMUSG00000034931Dhx88297.835ENSHGLG00000011583-8298.211Heterocephalus_glaber_female
ENSMUSG00000034931Dhx88297.736ENSHGLG00100000532-8298.111Heterocephalus_glaber_male
ENSMUSG00000034931Dhx86778.427ENSHCOG00000016177dhx89193.504Hippocampus_comes
ENSMUSG00000034931Dhx87996.524ENSIPUG00000019179dhx88296.146Ictalurus_punctatus
ENSMUSG00000034931Dhx810097.428ENSSTOG00000013747DHX810097.428Ictidomys_tridecemlineatus
ENSMUSG00000034931Dhx89794.215ENSJJAG00000017249Dhx89197.536Jaculus_jaculus
ENSMUSG00000034931Dhx88094.695ENSKMAG00000005568dhx88195.441Kryptolebias_marmoratus
ENSMUSG00000034931Dhx89782.609ENSLBEG00000011490dhx88987.072Labrus_bergylta
ENSMUSG00000034931Dhx88192.560ENSLBEG00000012048dhx88392.986Labrus_bergylta
ENSMUSG00000034931Dhx88196.315ENSLACG00000001765DHX88496.219Latimeria_chalumnae
ENSMUSG00000034931Dhx87996.758ENSLOCG00000012147dhx88396.116Lepisosteus_oculatus
ENSMUSG00000034931Dhx89696.318ENSLAFG00000022159DHX810096.318Loxodonta_africana
ENSMUSG00000034931Dhx810096.678ENSMFAG00000044651DHX810096.785Macaca_fascicularis
ENSMUSG00000034931Dhx810096.593ENSMMUG00000012071DHX810095.981Macaca_mulatta
ENSMUSG00000034931Dhx810094.614ENSMNEG00000033786DHX89997.035Macaca_nemestrina
ENSMUSG00000034931Dhx89392.479ENSMLEG00000006176DHX810092.163Mandrillus_leucophaeus
ENSMUSG00000034931Dhx89986.677ENSMAMG00000006195dhx88195.812Mastacembelus_armatus
ENSMUSG00000034931Dhx88594.795ENSMZEG00005007559dhx89195.542Maylandia_zebra
ENSMUSG00000034931Dhx89885.901ENSMGAG00000002343DHX89885.796Meleagris_gallopavo
ENSMUSG00000034931Dhx810096.865ENSMICG00000009509DHX810097.026Microcebus_murinus
ENSMUSG00000034931Dhx810097.347ENSMOCG00000008962Dhx810097.508Microtus_ochrogaster
ENSMUSG00000034931Dhx86888.861ENSMMOG00000000567dhx810089.093Mola_mola
ENSMUSG00000034931Dhx89387.352ENSMMOG00000000596dhx89195.137Mola_mola
ENSMUSG00000034931Dhx89994.151ENSMODG00000015181DHX89994.151Monodelphis_domestica
ENSMUSG00000034931Dhx88092.292ENSMALG00000013129dhx88193.009Monopterus_albus
ENSMUSG00000034931Dhx810099.357MGP_CAROLIEiJ_G0017228Dhx810099.357Mus_caroli
ENSMUSG00000034931Dhx810099.357MGP_PahariEiJ_G0018358Dhx810099.357Mus_pahari
ENSMUSG00000034931Dhx810098.633MGP_SPRETEiJ_G0018071Dhx810099.108Mus_spretus
ENSMUSG00000034931Dhx810096.463ENSMPUG00000009717DHX810096.383Mustela_putorius_furo
ENSMUSG00000034931Dhx88495.354ENSMLUG00000000090DHX89993.200Myotis_lucifugus
ENSMUSG00000034931Dhx810098.071ENSNGAG00000023993Dhx810098.071Nannospalax_galili
ENSMUSG00000034931Dhx88694.895ENSNBRG00000023205dhx89195.643Neolamprologus_brichardi
ENSMUSG00000034931Dhx89690.536ENSMEUG00000016093DHX810090.704Notamacropus_eugenii
ENSMUSG00000034931Dhx88797.792ENSOPRG00000014865DHX89092.197Ochotona_princeps
ENSMUSG00000034931Dhx810093.397ENSODEG00000018025DHX810093.477Octodon_degus
ENSMUSG00000034931Dhx85489.394ENSOANG00000003160-7989.595Ornithorhynchus_anatinus
ENSMUSG00000034931Dhx89796.865ENSOCUG00000008014DHX89997.030Oryctolagus_cuniculus
ENSMUSG00000034931Dhx89886.482ENSORLG00000011951dhx89686.238Oryzias_latipes
ENSMUSG00000034931Dhx88094.695ENSORLG00020022333dhx87995.825Oryzias_latipes_hni
ENSMUSG00000034931Dhx88194.141ENSORLG00015021793dhx87895.723Oryzias_latipes_hsok
ENSMUSG00000034931Dhx89886.383ENSOMEG00000004222dhx89293.638Oryzias_melastigma
ENSMUSG00000034931Dhx810095.349ENSOGAG00000010418DHX89995.509Otolemur_garnettii
ENSMUSG00000034931Dhx810095.820ENSOARG00000005409DHX89995.900Ovis_aries
ENSMUSG00000034931Dhx810096.704ENSPPAG00000042508DHX810096.785Pan_paniscus
ENSMUSG00000034931Dhx810096.543ENSPPRG00000003753DHX810096.704Panthera_pardus
ENSMUSG00000034931Dhx810096.543ENSPTIG00000008944DHX810096.704Panthera_tigris_altaica
ENSMUSG00000034931Dhx810096.704ENSPTRG00000009246DHX810096.785Pan_troglodytes
ENSMUSG00000034931Dhx810097.106ENSPANG00000021364DHX810097.106Papio_anubis
ENSMUSG00000034931Dhx88996.509ENSPKIG00000001290dhx89495.736Paramormyrops_kingsleyae
ENSMUSG00000034931Dhx89986.840ENSPMGG00000019078dhx88395.354Periophthalmus_magnuspinnatus
ENSMUSG00000034931Dhx810098.794ENSPEMG00000012654Dhx810098.794Peromyscus_maniculatus_bairdii
ENSMUSG00000034931Dhx86394.054ENSPMAG00000001726dhx810094.188Petromyzon_marinus
ENSMUSG00000034931Dhx89994.232ENSPCIG00000030254DHX89994.151Phascolarctos_cinereus
ENSMUSG00000034931Dhx88094.494ENSPFOG00000017661dhx87895.710Poecilia_formosa
ENSMUSG00000034931Dhx88094.494ENSPLAG00000011548dhx87895.710Poecilia_latipinna
ENSMUSG00000034931Dhx88094.494ENSPMEG00000008166dhx87895.710Poecilia_mexicana
ENSMUSG00000034931Dhx88094.695ENSPREG00000011752dhx88295.258Poecilia_reticulata
ENSMUSG00000034931Dhx810096.624ENSPPYG00000008357DHX810096.704Pongo_abelii
ENSMUSG00000034931Dhx810084.887ENSPCAG00000015519DHX810084.887Procavia_capensis
ENSMUSG00000034931Dhx810095.257ENSPVAG00000014872DHX810095.418Pteropus_vampyrus
ENSMUSG00000034931Dhx88094.795ENSPNYG00000001365dhx88195.542Pundamilia_nyererei
ENSMUSG00000034931Dhx87996.146ENSPNAG00000008427dhx88196.146Pygocentrus_nattereri
ENSMUSG00000034931Dhx810099.489ENSRNOG00000020772Dhx810099.357Rattus_norvegicus
ENSMUSG00000034931Dhx810095.571ENSRBIG00000039031DHX8100100.000Rhinopithecus_bieti
ENSMUSG00000034931Dhx810096.463ENSRROG00000036032DHX810096.543Rhinopithecus_roxellana
ENSMUSG00000034931Dhx88050.102YER013W-8449.248Saccharomyces_cerevisiae
ENSMUSG00000034931Dhx810096.061ENSSBOG00000031719DHX810096.222Saimiri_boliviensis_boliviensis
ENSMUSG00000034931Dhx89398.506ENSSHAG00000009871DHX89993.831Sarcophilus_harrisii
ENSMUSG00000034931Dhx88296.254ENSSFOG00015024187dhx88296.319Scleropages_formosus
ENSMUSG00000034931Dhx89876.873ENSSMAG00000008522dhx88686.200Scophthalmus_maximus
ENSMUSG00000034931Dhx89389.864ENSSMAG00000008607dhx88893.434Scophthalmus_maximus
ENSMUSG00000034931Dhx88693.644ENSSDUG00000010774dhx89194.833Seriola_dumerili
ENSMUSG00000034931Dhx89878.328ENSSDUG00000010822dhx88686.916Seriola_dumerili
ENSMUSG00000034931Dhx89190.857ENSSLDG00000023594dhx89395.441Seriola_lalandi_dorsalis
ENSMUSG00000034931Dhx89977.166ENSSLDG00000023277dhx89485.044Seriola_lalandi_dorsalis
ENSMUSG00000034931Dhx884100.000ENSSARG00000007300DHX885100.000Sorex_araneus
ENSMUSG00000034931Dhx89990.105ENSSPUG00000004382DHX810089.294Sphenodon_punctatus
ENSMUSG00000034931Dhx88289.391ENSSPAG00000006314dhx88291.443Stegastes_partitus
ENSMUSG00000034931Dhx810095.498ENSSSCG00000017378DHX810095.498Sus_scrofa
ENSMUSG00000034931Dhx89976.748ENSTRUG00000004063dhx89486.653Takifugu_rubripes
ENSMUSG00000034931Dhx88888.205ENSTNIG00000002771dhx89486.952Tetraodon_nigroviridis
ENSMUSG00000034931Dhx88296.994ENSTBEG00000012089DHX87796.994Tupaia_belangeri
ENSMUSG00000034931Dhx810093.650ENSTTRG00000016056DHX810093.569Tursiops_truncatus
ENSMUSG00000034931Dhx810096.337ENSUAMG00000018121DHX810096.383Ursus_americanus
ENSMUSG00000034931Dhx89396.533ENSUMAG00000012797DHX810096.357Ursus_maritimus
ENSMUSG00000034931Dhx871100.000ENSVPAG00000004605DHX873100.000Vicugna_pacos
ENSMUSG00000034931Dhx810095.981ENSVVUG00000017409DHX89796.061Vulpes_vulpes
ENSMUSG00000034931Dhx89983.065ENSXETG00000013672dhx87782.317Xenopus_tropicalis
ENSMUSG00000034931Dhx89294.213ENSXCOG00000003866dhx88594.861Xiphophorus_couchianus
ENSMUSG00000034931Dhx89883.570ENSXMAG00000017907dhx88595.155Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000166nucleotide binding-IEAFunction
GO:0000390spliceosomal complex disassembly21873635.IBAProcess
GO:0000398mRNA splicing, via spliceosome-ISOProcess
GO:0003676nucleic acid binding-IEAFunction
GO:0003723RNA binding21873635.IBAFunction
GO:0004386helicase activity-IEAFunction
GO:0005524ATP binding-IEAFunction
GO:0005634nucleus-ISOComponent
GO:0005654nucleoplasm-ISOComponent
GO:0005681spliceosomal complex-IEAComponent
GO:0006397mRNA processing-IEAProcess
GO:0008380RNA splicing-IEAProcess
GO:0016604nuclear body-ISOComponent
GO:0016787hydrolase activity-IEAFunction
GO:0034459ATP-dependent 3'-5' RNA helicase activity21873635.IBAFunction
GO:0042802identical protein binding-ISOFunction
GO:0071007U2-type catalytic step 2 spliceosome-ISOComponent
GO:0071013catalytic step 2 spliceosome21873635.IBAComponent
GO:0071013catalytic step 2 spliceosome-ISOComponent

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