EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000035047 (Gene tree)
Gene ID: 215194
Gene Symbol: Kri1
Alias: -
Full Name: KRI1 homolog
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 14513
Position: chr9: 21273457-21287969
Accession: 2384899
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000183665	-	345	-	-	- (aa)	-	-
ENSMUST00000038671	-	2598	-	ENSMUSP00000039688	705 (aa)	-	F6WIU1
ENSMUST00000184410	-	506	-	-	- (aa)	-	-
ENSMUST00000183912	-	2509	-	-	- (aa)	-	-
ENSMUST00000184615	-	894	-	-	- (aa)	-	-
ENSMUST00000184326	-	2490	-	ENSMUSP00000139184	587 (aa)	-	V9GXJ9
ENSMUST00000183503	-	651	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000035047's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000035047's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000035047	Kri1	99	81.557	ENSG00000129347	KRI1	100	96.154	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000447	endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	21873635.	IBA	Process
GO:0005730	nucleolus	21873635.	IBA	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0030686	90S preribosome	21873635.	IBA	Component