EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000035049 (Gene tree)
Gene ID: 107094
Gene Symbol: Rrp12
Alias: -
Full Name: ribosomal RNA processing 12 homolog (S. cerevisiae)
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Minus strand
Length: 33302 bases
Position: chr19:41862852-41896153
Accession: 2147437
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000039853	NUC173	PF08161.12	3.6e-75	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000038677	-	4319	-	ENSMUSP00000039853	1295 (aa)	-	Q6P5B0

Gene Model

Click here to download ENSMUSG00000035049's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000035049's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000035049	Rrp12	99	90.131	ENSG00000052749	RRP12	100	96.875	Homo_sapiens
ENSMUSG00000035049	Rrp12	99	63.447	ENSAPOG00000013355	rrp12	99	63.085	Acanthochromis_polyacanthus
ENSMUSG00000035049	Rrp12	99	88.915	ENSAMEG00000000134	RRP12	99	89.145	Ailuropoda_melanoleuca
ENSMUSG00000035049	Rrp12	99	64.081	ENSACIG00000022673	rrp12	99	64.099	Amphilophus_citrinellus
ENSMUSG00000035049	Rrp12	99	64.341	ENSAOCG00000016149	rrp12	99	64.126	Amphiprion_ocellaris
ENSMUSG00000035049	Rrp12	99	63.854	ENSAPEG00000016023	rrp12	99	63.643	Amphiprion_percula
ENSMUSG00000035049	Rrp12	99	63.207	ENSATEG00000022627	rrp12	99	63.077	Anabas_testudineus
ENSMUSG00000035049	Rrp12	96	64.869	ENSAPLG00000014387	RRP12	99	64.948	Anas_platyrhynchos
ENSMUSG00000035049	Rrp12	99	65.127	ENSACAG00000002175	RRP12	99	65.281	Anolis_carolinensis
ENSMUSG00000035049	Rrp12	99	89.026	ENSANAG00000037485	RRP12	99	89.474	Aotus_nancymaae
ENSMUSG00000035049	Rrp12	99	63.333	ENSACLG00000007354	rrp12	99	63.664	Astatotilapia_calliptera
ENSMUSG00000035049	Rrp12	99	60.756	ENSAMXG00000012852	rrp12	99	61.467	Astyanax_mexicanus
ENSMUSG00000035049	Rrp12	99	89.445	ENSBTAG00000002191	RRP12	99	89.368	Bos_taurus
ENSMUSG00000035049	Rrp12	85	88.647	ENSCJAG00000016549	-	99	88.738	Callithrix_jacchus
ENSMUSG00000035049	Rrp12	99	88.923	ENSCAFG00000009043	RRP12	99	88.923	Canis_familiaris
ENSMUSG00000035049	Rrp12	99	88.923	ENSCAFG00020005991	RRP12	99	88.923	Canis_lupus_dingo
ENSMUSG00000035049	Rrp12	99	86.611	ENSCHIG00000011876	RRP12	99	86.305	Capra_hircus
ENSMUSG00000035049	Rrp12	53	83.764	ENSTSYG00000030210	-	99	84.052	Carlito_syrichta
ENSMUSG00000035049	Rrp12	96	81.920	ENSCAPG00000008991	RRP12	98	81.840	Cavia_aperea
ENSMUSG00000035049	Rrp12	99	89.961	ENSCPOG00000004215	RRP12	99	89.884	Cavia_porcellus
ENSMUSG00000035049	Rrp12	70	86.294	ENSCCAG00000033123	-	83	86.952	Cebus_capucinus
ENSMUSG00000035049	Rrp12	80	88.018	ENSCCAG00000024088	RRP12	99	91.841	Cebus_capucinus
ENSMUSG00000035049	Rrp12	99	84.093	ENSCATG00000045310	RRP12	99	84.093	Cercocebus_atys
ENSMUSG00000035049	Rrp12	99	89.884	ENSCLAG00000003753	RRP12	99	90.039	Chinchilla_lanigera
ENSMUSG00000035049	Rrp12	88	89.703	ENSCSAG00000005877	RRP12	99	89.878	Chlorocebus_sabaeus
ENSMUSG00000035049	Rrp12	59	92.308	ENSCHOG00000003095	-	61	92.308	Choloepus_hoffmanni
ENSMUSG00000035049	Rrp12	94	72.578	ENSCPBG00000011935	RRP12	97	72.824	Chrysemys_picta_bellii
ENSMUSG00000035049	Rrp12	64	39.440	ENSCSAVG00000006059	-	99	39.227	Ciona_savignyi
ENSMUSG00000035049	Rrp12	99	90.208	ENSCANG00000031653	RRP12	99	90.789	Colobus_angolensis_palliatus
ENSMUSG00000035049	Rrp12	90	94.359	ENSCGRG00001004338	Rrp12	99	94.359	Cricetulus_griseus_chok1gshd
ENSMUSG00000035049	Rrp12	99	93.117	ENSCGRG00000011965	Rrp12	99	93.117	Cricetulus_griseus_crigri
ENSMUSG00000035049	Rrp12	99	61.864	ENSCSEG00000007799	rrp12	99	61.787	Cynoglossus_semilaevis
ENSMUSG00000035049	Rrp12	99	64.391	ENSCVAG00000003418	rrp12	99	64.176	Cyprinodon_variegatus
ENSMUSG00000035049	Rrp12	99	61.111	ENSDARG00000022410	rrp12	99	61.669	Danio_rerio
ENSMUSG00000035049	Rrp12	99	86.887	ENSDNOG00000005120	RRP12	99	85.890	Dasypus_novemcinctus
ENSMUSG00000035049	Rrp12	99	90.046	ENSDORG00000009199	Rrp12	99	90.046	Dipodomys_ordii
ENSMUSG00000035049	Rrp12	93	75.135	ENSETEG00000002455	RRP12	93	74.686	Echinops_telfairi
ENSMUSG00000035049	Rrp12	87	57.333	ENSEBUG00000006555	rrp12	98	63.830	Eptatretus_burgeri
ENSMUSG00000035049	Rrp12	99	89.668	ENSEASG00005008693	RRP12	99	89.746	Equus_asinus_asinus
ENSMUSG00000035049	Rrp12	94	89.582	ENSECAG00000010892	RRP12	99	89.664	Equus_caballus
ENSMUSG00000035049	Rrp12	63	82.275	ENSEEUG00000005447	-	70	71.698	Erinaceus_europaeus
ENSMUSG00000035049	Rrp12	99	63.867	ENSELUG00000010510	rrp12	100	63.499	Esox_lucius
ENSMUSG00000035049	Rrp12	99	89.077	ENSFCAG00000028639	RRP12	99	90.789	Felis_catus
ENSMUSG00000035049	Rrp12	94	70.844	ENSFALG00000008458	RRP12	99	70.598	Ficedula_albicollis
ENSMUSG00000035049	Rrp12	99	89.112	ENSFDAG00000019108	RRP12	95	89.266	Fukomys_damarensis
ENSMUSG00000035049	Rrp12	99	58.372	ENSFHEG00000004148	rrp12	99	58.089	Fundulus_heteroclitus
ENSMUSG00000035049	Rrp12	99	58.141	ENSGMOG00000004188	rrp12	99	58.218	Gadus_morhua
ENSMUSG00000035049	Rrp12	99	69.124	ENSGALG00000041331	RRP12	96	70.383	Gallus_gallus
ENSMUSG00000035049	Rrp12	99	63.926	ENSGAFG00000009038	rrp12	99	63.713	Gambusia_affinis
ENSMUSG00000035049	Rrp12	99	61.318	ENSGACG00000007175	rrp12	99	61.047	Gasterosteus_aculeatus
ENSMUSG00000035049	Rrp12	67	74.596	ENSGAGG00000019169	RRP12	96	74.596	Gopherus_agassizii
ENSMUSG00000035049	Rrp12	99	90.285	ENSGGOG00000014850	RRP12	99	90.789	Gorilla_gorilla
ENSMUSG00000035049	Rrp12	99	63.488	ENSHBUG00000023527	rrp12	99	63.818	Haplochromis_burtoni
ENSMUSG00000035049	Rrp12	99	89.266	ENSHGLG00000016772	RRP12	99	89.421	Heterocephalus_glaber_female
ENSMUSG00000035049	Rrp12	99	89.266	ENSHGLG00100015110	RRP12	99	89.421	Heterocephalus_glaber_male
ENSMUSG00000035049	Rrp12	99	61.978	ENSHCOG00000019519	rrp12	99	61.978	Hippocampus_comes
ENSMUSG00000035049	Rrp12	99	60.756	ENSIPUG00000000311	RRP12	99	61.141	Ictalurus_punctatus
ENSMUSG00000035049	Rrp12	99	90.811	ENSSTOG00000006515	RRP12	99	90.811	Ictidomys_tridecemlineatus
ENSMUSG00000035049	Rrp12	96	90.946	ENSJJAG00000000110	Rrp12	99	90.946	Jaculus_jaculus
ENSMUSG00000035049	Rrp12	99	63.643	ENSKMAG00000020621	rrp12	99	63.559	Kryptolebias_marmoratus
ENSMUSG00000035049	Rrp12	99	61.360	ENSLBEG00000015335	rrp12	99	61.592	Labrus_bergylta
ENSMUSG00000035049	Rrp12	78	57.391	ENSLACG00000016633	RRP12	81	66.667	Latimeria_chalumnae
ENSMUSG00000035049	Rrp12	99	62.018	ENSLOCG00000003846	rrp12	99	62.096	Lepisosteus_oculatus
ENSMUSG00000035049	Rrp12	100	89.555	ENSLAFG00000015965	RRP12	100	89.171	Loxodonta_africana
ENSMUSG00000035049	Rrp12	99	90.285	ENSMFAG00000041558	RRP12	99	90.439	Macaca_fascicularis
ENSMUSG00000035049	Rrp12	99	90.285	ENSMMUG00000019634	RRP12	99	90.439	Macaca_mulatta
ENSMUSG00000035049	Rrp12	99	86.045	ENSMNEG00000036759	RRP12	99	90.132	Macaca_nemestrina
ENSMUSG00000035049	Rrp12	99	84.324	ENSMLEG00000041317	RRP12	99	90.789	Mandrillus_leucophaeus
ENSMUSG00000035049	Rrp12	99	62.519	ENSMAMG00000002964	rrp12	99	63.115	Mastacembelus_armatus
ENSMUSG00000035049	Rrp12	99	63.488	ENSMZEG00005003241	rrp12	99	63.818	Maylandia_zebra
ENSMUSG00000035049	Rrp12	99	68.098	ENSMGAG00000009829	RRP12	99	67.945	Meleagris_gallopavo
ENSMUSG00000035049	Rrp12	99	91.133	ENSMAUG00000020743	Rrp12	99	91.415	Mesocricetus_auratus
ENSMUSG00000035049	Rrp12	99	89.368	ENSMICG00000007624	RRP12	99	89.368	Microcebus_murinus
ENSMUSG00000035049	Rrp12	99	95.050	ENSMOCG00000006753	Rrp12	99	95.050	Microtus_ochrogaster
ENSMUSG00000035049	Rrp12	99	62.616	ENSMMOG00000010708	rrp12	99	62.693	Mola_mola
ENSMUSG00000035049	Rrp12	99	78.096	ENSMODG00000004315	RRP12	99	78.362	Monodelphis_domestica
ENSMUSG00000035049	Rrp12	99	60.000	ENSMALG00000016560	rrp12	99	63.484	Monopterus_albus
ENSMUSG00000035049	Rrp12	99	98.086	MGP_CAROLIEiJ_G0022957	Rrp12	99	98.086	Mus_caroli
ENSMUSG00000035049	Rrp12	99	97.912	MGP_PahariEiJ_G0014447	Rrp12	99	97.912	Mus_pahari
ENSMUSG00000035049	Rrp12	100	99.614	MGP_SPRETEiJ_G0023878	Rrp12	100	99.614	Mus_spretus
ENSMUSG00000035049	Rrp12	99	88.923	ENSMPUG00000017046	RRP12	99	88.769	Mustela_putorius_furo
ENSMUSG00000035049	Rrp12	99	89.470	ENSMLUG00000017160	RRP12	99	89.623	Myotis_lucifugus
ENSMUSG00000035049	Rrp12	99	92.890	ENSNGAG00000024144	Rrp12	99	92.968	Nannospalax_galili
ENSMUSG00000035049	Rrp12	99	62.966	ENSNBRG00000009987	rrp12	99	62.992	Neolamprologus_brichardi
ENSMUSG00000035049	Rrp12	92	90.789	ENSNLEG00000013762	RRP12	99	90.789	Nomascus_leucogenys
ENSMUSG00000035049	Rrp12	99	72.973	ENSMEUG00000003185	RRP12	99	72.819	Notamacropus_eugenii
ENSMUSG00000035049	Rrp12	94	85.275	ENSOPRG00000005001	RRP12	94	85.113	Ochotona_princeps
ENSMUSG00000035049	Rrp12	99	88.331	ENSODEG00000016439	RRP12	99	88.717	Octodon_degus
ENSMUSG00000035049	Rrp12	99	63.721	ENSONIG00000009528	rrp12	99	64.203	Oreochromis_niloticus
ENSMUSG00000035049	Rrp12	99	72.252	ENSOANG00000006560	RRP12	99	72.252	Ornithorhynchus_anatinus
ENSMUSG00000035049	Rrp12	99	89.583	ENSOCUG00000005662	RRP12	99	89.660	Oryctolagus_cuniculus
ENSMUSG00000035049	Rrp12	99	64.081	ENSORLG00000008688	rrp12	99	64.622	Oryzias_latipes
ENSMUSG00000035049	Rrp12	97	64.297	ENSORLG00020002355	rrp12	99	64.534	Oryzias_latipes_hni
ENSMUSG00000035049	Rrp12	99	64.236	ENSORLG00015006709	rrp12	99	64.407	Oryzias_latipes_hsok
ENSMUSG00000035049	Rrp12	97	64.692	ENSOMEG00000002609	rrp12	99	65.087	Oryzias_melastigma
ENSMUSG00000035049	Rrp12	99	88.181	ENSOGAG00000001626	RRP12	99	87.721	Otolemur_garnettii
ENSMUSG00000035049	Rrp12	99	87.769	ENSOARG00000009681	RRP12	99	87.692	Ovis_aries
ENSMUSG00000035049	Rrp12	97	89.760	ENSPPAG00000043885	RRP12	99	90.789	Pan_paniscus
ENSMUSG00000035049	Rrp12	99	89.000	ENSPPRG00000002029	RRP12	99	91.447	Panthera_pardus
ENSMUSG00000035049	Rrp12	97	88.327	ENSPTIG00000004428	RRP12	99	90.789	Panthera_tigris_altaica
ENSMUSG00000035049	Rrp12	97	89.760	ENSPTRG00000002806	RRP12	99	90.789	Pan_troglodytes
ENSMUSG00000035049	Rrp12	99	90.208	ENSPANG00000021360	RRP12	99	90.789	Papio_anubis
ENSMUSG00000035049	Rrp12	99	64.055	ENSPKIG00000016516	rrp12	99	64.132	Paramormyrops_kingsleyae
ENSMUSG00000035049	Rrp12	99	62.112	ENSPMGG00000020217	rrp12	99	61.912	Periophthalmus_magnuspinnatus
ENSMUSG00000035049	Rrp12	99	95.448	ENSPEMG00000008437	Rrp12	99	95.448	Peromyscus_maniculatus_bairdii
ENSMUSG00000035049	Rrp12	99	47.483	ENSPMAG00000007493	rrp12	99	47.605	Petromyzon_marinus
ENSMUSG00000035049	Rrp12	96	82.886	ENSPCIG00000002157	RRP12	100	77.975	Phascolarctos_cinereus
ENSMUSG00000035049	Rrp12	99	63.693	ENSPFOG00000014975	rrp12	99	63.482	Poecilia_formosa
ENSMUSG00000035049	Rrp12	99	63.460	ENSPLAG00000009840	rrp12	99	63.251	Poecilia_latipinna
ENSMUSG00000035049	Rrp12	99	63.848	ENSPMEG00000021871	rrp12	99	63.636	Poecilia_mexicana
ENSMUSG00000035049	Rrp12	99	63.052	ENSPREG00000020950	rrp12	99	62.846	Poecilia_reticulata
ENSMUSG00000035049	Rrp12	99	88.281	ENSPPYG00000002528	RRP12	99	88.435	Pongo_abelii
ENSMUSG00000035049	Rrp12	94	90.960	ENSPCAG00000008967	RRP12	94	90.960	Procavia_capensis
ENSMUSG00000035049	Rrp12	99	90.347	ENSPCOG00000014009	RRP12	99	90.347	Propithecus_coquereli
ENSMUSG00000035049	Rrp12	99	84.681	ENSPVAG00000003370	RRP12	100	84.911	Pteropus_vampyrus
ENSMUSG00000035049	Rrp12	99	63.665	ENSPNYG00000009451	rrp12	99	63.972	Pundamilia_nyererei
ENSMUSG00000035049	Rrp12	99	61.758	ENSPNAG00000007658	rrp12	99	62.298	Pygocentrus_nattereri
ENSMUSG00000035049	Rrp12	99	96.520	ENSRNOG00000048495	Rrp12	99	96.520	Rattus_norvegicus
ENSMUSG00000035049	Rrp12	99	90.131	ENSRBIG00000021296	RRP12	99	90.789	Rhinopithecus_bieti
ENSMUSG00000035049	Rrp12	99	90.285	ENSRROG00000032482	RRP12	99	90.789	Rhinopithecus_roxellana
ENSMUSG00000035049	Rrp12	99	89.129	ENSSBOG00000030992	RRP12	100	88.817	Saimiri_boliviensis_boliviensis
ENSMUSG00000035049	Rrp12	99	77.178	ENSSHAG00000018275	RRP12	99	77.487	Sarcophilus_harrisii
ENSMUSG00000035049	Rrp12	99	63.510	ENSSFOG00015016400	rrp12	99	63.433	Scleropages_formosus
ENSMUSG00000035049	Rrp12	99	62.452	ENSSMAG00000004047	rrp12	99	62.972	Scophthalmus_maximus
ENSMUSG00000035049	Rrp12	99	63.178	ENSSDUG00000022871	rrp12	99	63.020	Seriola_dumerili
ENSMUSG00000035049	Rrp12	99	62.791	ENSSLDG00000003038	rrp12	99	62.789	Seriola_lalandi_dorsalis
ENSMUSG00000035049	Rrp12	99	67.945	ENSSPUG00000012221	RRP12	99	68.328	Sphenodon_punctatus
ENSMUSG00000035049	Rrp12	99	63.953	ENSSPAG00000002261	rrp12	99	63.818	Stegastes_partitus
ENSMUSG00000035049	Rrp12	99	89.299	ENSSSCG00000010514	RRP12	99	89.299	Sus_scrofa
ENSMUSG00000035049	Rrp12	88	68.293	ENSTGUG00000009711	RRP12	100	68.206	Taeniopygia_guttata
ENSMUSG00000035049	Rrp12	99	58.860	ENSTRUG00000012017	rrp12	99	58.937	Takifugu_rubripes
ENSMUSG00000035049	Rrp12	99	62.587	ENSTNIG00000016522	rrp12	99	62.741	Tetraodon_nigroviridis
ENSMUSG00000035049	Rrp12	77	89.320	ENSTBEG00000004907	RRP12	80	89.320	Tupaia_belangeri
ENSMUSG00000035049	Rrp12	99	85.285	ENSTTRG00000009878	RRP12	99	85.439	Tursiops_truncatus
ENSMUSG00000035049	Rrp12	99	89.085	ENSUAMG00000009092	RRP12	99	88.932	Ursus_americanus
ENSMUSG00000035049	Rrp12	99	86.518	ENSUMAG00000021621	RRP12	99	86.364	Ursus_maritimus
ENSMUSG00000035049	Rrp12	99	88.673	ENSVVUG00000023168	RRP12	99	88.673	Vulpes_vulpes
ENSMUSG00000035049	Rrp12	99	67.436	ENSXETG00000003430	rrp12	99	67.436	Xenopus_tropicalis
ENSMUSG00000035049	Rrp12	90	65.120	ENSXCOG00000012082	rrp12	97	64.872	Xiphophorus_couchianus
ENSMUSG00000035049	Rrp12	99	63.848	ENSXMAG00000013498	rrp12	99	63.636	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005634	nucleus	-	IEA	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0008150	biological_process	-	ND	Process
GO:0016020	membrane	-	IEA	Component
GO:0016021	integral component of membrane	-	IEA	Component