EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Expression
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSMUSG00000035093 (Gene tree)
Gene ID
70354
Gene Symbol
Secisbp2l
Alias
3110001I20Rik
Full Name
SECIS binding protein 2-like
Gene Type
protein_coding
Species
Mus_musculus
Status
confidence
Strand
Minus strand
Length
45885 bases
Position
chr2:125736986-125782870
Accession
1917604
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMUSP00000121529Ribosomal_L7AePF01248.269.4e-2211
ENSMUSP00000055772Ribosomal_L7AePF01248.263.5e-2111
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
27452465The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart DiseaseIC & HL_12016 Jul 21Liao YDOI: 10.1016/j.celrep.2016.06.084
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMUST00000139944-2295-ENSMUSP00000121529428 (aa)-F6QQ13
ENSMUST00000136450-600--- (aa)--
ENSMUST00000053699-6797XM_006500156ENSMUSP000000557721089 (aa)XP_006500219A2AQE2
Gene Model
Click here to download ENSMUSG00000035093's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000035093's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMUSG00000035093Secisbp2l9993.647ENSG00000138593SECISBP2L10091.746Homo_sapiens
ENSMUSG00000035093Secisbp2l7550.298ENSAPOG00000005939secisbp25245.183Acanthochromis_polyacanthus
ENSMUSG00000035093Secisbp2l9873.502ENSAPOG00000015429SECISBP2L9662.257Acanthochromis_polyacanthus
ENSMUSG00000035093Secisbp2l9993.412ENSAMEG00000001504SECISBP2L9986.106Ailuropoda_melanoleuca
ENSMUSG00000035093Secisbp2l9673.077ENSACIG00000020051SECISBP2L9468.559Amphilophus_citrinellus
ENSMUSG00000035093Secisbp2l7449.074ENSACIG00000024185secisbp26747.778Amphilophus_citrinellus
ENSMUSG00000035093Secisbp2l9873.272ENSAOCG00000017002SECISBP2L9761.459Amphiprion_ocellaris
ENSMUSG00000035093Secisbp2l9873.272ENSAPEG00000024840SECISBP2L9861.792Amphiprion_percula
ENSMUSG00000035093Secisbp2l9773.364ENSATEG00000018252SECISBP2L9762.152Anabas_testudineus
ENSMUSG00000035093Secisbp2l9983.803ENSAPLG00000004694SECISBP2L9976.944Anas_platyrhynchos
ENSMUSG00000035093Secisbp2l9783.933ENSACAG00000006021SECISBP2L9974.811Anolis_carolinensis
ENSMUSG00000035093Secisbp2l9993.412ENSANAG00000027892SECISBP2L9987.179Aotus_nancymaae
ENSMUSG00000035093Secisbp2l9872.120ENSACLG00000017020SECISBP2L9661.891Astatotilapia_calliptera
ENSMUSG00000035093Secisbp2l7550.592ENSAMXG00000015953secisbp25147.059Astyanax_mexicanus
ENSMUSG00000035093Secisbp2l9775.656ENSAMXG00000037811SECISBP2L9671.759Astyanax_mexicanus
ENSMUSG00000035093Secisbp2l7947.278ENSBTAG00000001939SECISBP25545.390Bos_taurus
ENSMUSG00000035093Secisbp2l9993.176ENSBTAG00000046553SECISBP2L9985.714Bos_taurus
ENSMUSG00000035093Secisbp2l9993.176ENSCJAG00000001637SECISBP2L9987.091Callithrix_jacchus
ENSMUSG00000035093Secisbp2l9993.412ENSCAFG00000014822SECISBP2L9887.617Canis_familiaris
ENSMUSG00000035093Secisbp2l9993.647ENSCHIG00000017527SECISBP2L9986.185Capra_hircus
ENSMUSG00000035093Secisbp2l9992.689ENSTSYG00000004333SECISBP2L9986.765Carlito_syrichta
ENSMUSG00000035093Secisbp2l9992.235ENSCAPG00000011554SECISBP2L9979.798Cavia_aperea
ENSMUSG00000035093Secisbp2l9992.235ENSCPOG00000003442SECISBP2L9883.747Cavia_porcellus
ENSMUSG00000035093Secisbp2l9993.176ENSCCAG00000030509SECISBP2L9987.182Cebus_capucinus
ENSMUSG00000035093Secisbp2l9993.647ENSCATG00000033967SECISBP2L10087.012Cercocebus_atys
ENSMUSG00000035093Secisbp2l9992.000ENSCLAG00000017094SECISBP2L9784.152Chinchilla_lanigera
ENSMUSG00000035093Secisbp2l9993.412ENSCSAG00000010632SECISBP2L10087.103Chlorocebus_sabaeus
ENSMUSG00000035093Secisbp2l8176.939ENSCHOG00000009317SECISBP2L8177.149Choloepus_hoffmanni
ENSMUSG00000035093Secisbp2l9984.038ENSCPBG00000024750SECISBP2L9975.678Chrysemys_picta_bellii
ENSMUSG00000035093Secisbp2l8049.857ENSCPBG00000005608SECISBP27151.892Chrysemys_picta_bellii
ENSMUSG00000035093Secisbp2l9839.535ENSCING00000024077-8434.797Ciona_intestinalis
ENSMUSG00000035093Secisbp2l9993.412ENSCANG00000029294SECISBP2L10087.193Colobus_angolensis_palliatus
ENSMUSG00000035093Secisbp2l9995.765ENSCGRG00001018900Secisbp2l9992.272Cricetulus_griseus_chok1gshd
ENSMUSG00000035093Secisbp2l9995.765ENSCGRG00000011372Secisbp2l9992.130Cricetulus_griseus_crigri
ENSMUSG00000035093Secisbp2l6350.909ENSCSEG00000010220-8148.701Cynoglossus_semilaevis
ENSMUSG00000035093Secisbp2l9872.811ENSCVAG00000010490SECISBP2L9770.122Cyprinodon_variegatus
ENSMUSG00000035093Secisbp2l7950.000ENSDARG00000073892secisbp26150.708Danio_rerio
ENSMUSG00000035093Secisbp2l9992.235ENSDNOG00000035508SECISBP2L9985.000Dasypus_novemcinctus
ENSMUSG00000035093Secisbp2l9992.941ENSDORG00000008662Secisbp2l9986.182Dipodomys_ordii
ENSMUSG00000035093Secisbp2l9688.835ENSETEG00000019519SECISBP2L10076.225Echinops_telfairi
ENSMUSG00000035093Secisbp2l7440.625ENSEBUG00000008208secisbp29040.510Eptatretus_burgeri
ENSMUSG00000035093Secisbp2l9992.941ENSEASG00005016797SECISBP2L9986.157Equus_asinus_asinus
ENSMUSG00000035093Secisbp2l9993.176ENSECAG00000011253SECISBP2L9989.575Equus_caballus
ENSMUSG00000035093Secisbp2l9992.000ENSEEUG00000012692SECISBP2L9487.765Erinaceus_europaeus
ENSMUSG00000035093Secisbp2l7646.224ENSELUG00000014795-7646.067Esox_lucius
ENSMUSG00000035093Secisbp2l9774.419ENSELUG00000004052SECISBP2L9761.718Esox_lucius
ENSMUSG00000035093Secisbp2l9992.706ENSFCAG00000022355SECISBP2L9887.454Felis_catus
ENSMUSG00000035093Secisbp2l9984.906ENSFALG00000011503SECISBP2L9977.653Ficedula_albicollis
ENSMUSG00000035093Secisbp2l9991.765ENSFDAG00000016793SECISBP2L9987.361Fukomys_damarensis
ENSMUSG00000035093Secisbp2l9873.733ENSFHEG00000002604SECISBP2L9759.161Fundulus_heteroclitus
ENSMUSG00000035093Secisbp2l5470.149ENSGMOG00000017234secisbp25953.425Gadus_morhua
ENSMUSG00000035093Secisbp2l9773.953ENSGMOG00000014876SECISBP2L9265.421Gadus_morhua
ENSMUSG00000035093Secisbp2l9984.742ENSGALG00000041362SECISBP2L9973.183Gallus_gallus
ENSMUSG00000035093Secisbp2l9873.441ENSGAFG00000005460SECISBP2L9659.079Gambusia_affinis
ENSMUSG00000035093Secisbp2l9773.660ENSGACG00000016786SECISBP2L9961.045Gasterosteus_aculeatus
ENSMUSG00000035093Secisbp2l8443.392ENSGACG00000013757secisbp26741.501Gasterosteus_aculeatus
ENSMUSG00000035093Secisbp2l9983.568ENSGAGG00000008607SECISBP2L9975.468Gopherus_agassizii
ENSMUSG00000035093Secisbp2l9993.647ENSGGOG00000007289SECISBP2L10087.284Gorilla_gorilla
ENSMUSG00000035093Secisbp2l9872.120ENSHBUG00000012549SECISBP2L9769.683Haplochromis_burtoni
ENSMUSG00000035093Secisbp2l7350.769ENSHBUG00000007014secisbp28450.140Haplochromis_burtoni
ENSMUSG00000035093Secisbp2l9992.471ENSHGLG00000010779SECISBP2L9884.580Heterocephalus_glaber_female
ENSMUSG00000035093Secisbp2l9988.941ENSHGLG00100015772SECISBP2L9981.353Heterocephalus_glaber_male
ENSMUSG00000035093Secisbp2l9969.037ENSHCOG00000001763SECISBP2L9269.388Hippocampus_comes
ENSMUSG00000035093Secisbp2l9993.868ENSSTOG00000005317SECISBP2L9987.716Ictidomys_tridecemlineatus
ENSMUSG00000035093Secisbp2l9985.047ENSJJAG00000014644-9984.133Jaculus_jaculus
ENSMUSG00000035093Secisbp2l7874.775ENSKMAG00000003849SECISBP2L8156.972Kryptolebias_marmoratus
ENSMUSG00000035093Secisbp2l9773.427ENSLBEG00000005166SECISBP2L9761.148Labrus_bergylta
ENSMUSG00000035093Secisbp2l7348.512ENSLACG00000005735SECISBP27846.370Latimeria_chalumnae
ENSMUSG00000035093Secisbp2l9876.941ENSLACG00000012542SECISBP2L9870.732Latimeria_chalumnae
ENSMUSG00000035093Secisbp2l9877.251ENSLOCG00000013180SECISBP2L9866.698Lepisosteus_oculatus
ENSMUSG00000035093Secisbp2l7550.155ENSLOCG00000011742secisbp26745.926Lepisosteus_oculatus
ENSMUSG00000035093Secisbp2l9991.765ENSLAFG00000006484SECISBP2L10086.754Loxodonta_africana
ENSMUSG00000035093Secisbp2l9993.647ENSMFAG00000001802SECISBP2L10087.103Macaca_fascicularis
ENSMUSG00000035093Secisbp2l9993.647ENSMMUG00000009837SECISBP2L10087.193Macaca_mulatta
ENSMUSG00000035093Secisbp2l9993.647ENSMNEG00000032007SECISBP2L10087.103Macaca_nemestrina
ENSMUSG00000035093Secisbp2l9993.882ENSMLEG00000040214SECISBP2L10087.103Mandrillus_leucophaeus
ENSMUSG00000035093Secisbp2l9973.059ENSMAMG00000011674SECISBP2L9670.210Mastacembelus_armatus
ENSMUSG00000035093Secisbp2l8342.820ENSMAMG00000006644secisbp25241.761Mastacembelus_armatus
ENSMUSG00000035093Secisbp2l9872.120ENSMZEG00005012079SECISBP2L9661.776Maylandia_zebra
ENSMUSG00000035093Secisbp2l9984.742ENSMGAG00000007165SECISBP2L9977.839Meleagris_gallopavo
ENSMUSG00000035093Secisbp2l9995.294ENSMAUG00000012011Secisbp2l9890.351Mesocricetus_auratus
ENSMUSG00000035093Secisbp2l9993.882ENSMICG00000013007SECISBP2L9986.636Microcebus_murinus
ENSMUSG00000035093Secisbp2l9995.294ENSMOCG00000014560Secisbp2l9992.287Microtus_ochrogaster
ENSMUSG00000035093Secisbp2l8247.324ENSMMOG00000017977secisbp28547.989Mola_mola
ENSMUSG00000035093Secisbp2l9986.588ENSMODG00000002516SECISBP2L9979.747Monodelphis_domestica
ENSMUSG00000035093Secisbp2l9773.953ENSMALG00000012480SECISBP2L9761.389Monopterus_albus
ENSMUSG00000035093Secisbp2l9999.766MGP_CAROLIEiJ_G0024231Secisbp2l10099.766Mus_caroli
ENSMUSG00000035093Secisbp2l9999.063MGP_PahariEiJ_G0025677Secisbp2l10099.063Mus_pahari
ENSMUSG00000035093Secisbp2l10099.357MGP_SPRETEiJ_G0025151Secisbp2l10099.766Mus_spretus
ENSMUSG00000035093Secisbp2l7548.476ENSMPUG00000008495-6448.747Mustela_putorius_furo
ENSMUSG00000035093Secisbp2l9992.941ENSMPUG00000012321SECISBP2L9986.339Mustela_putorius_furo
ENSMUSG00000035093Secisbp2l9993.412ENSMLUG00000012918SECISBP2L9985.740Myotis_lucifugus
ENSMUSG00000035093Secisbp2l9991.981ENSNGAG00000019213Secisbp2l9986.131Nannospalax_galili
ENSMUSG00000035093Secisbp2l7550.000ENSNBRG00000022804secisbp25045.455Neolamprologus_brichardi
ENSMUSG00000035093Secisbp2l9872.248ENSNBRG00000022500SECISBP2L9661.488Neolamprologus_brichardi
ENSMUSG00000035093Secisbp2l9993.412ENSNLEG00000006102SECISBP2L10087.193Nomascus_leucogenys
ENSMUSG00000035093Secisbp2l7580.940ENSMEUG00000003127SECISBP2L7480.940Notamacropus_eugenii
ENSMUSG00000035093Secisbp2l9688.049ENSOPRG00000010893SECISBP2L9978.040Ochotona_princeps
ENSMUSG00000035093Secisbp2l9991.059ENSODEG00000007846SECISBP2L9982.249Octodon_degus
ENSMUSG00000035093Secisbp2l9872.120ENSONIG00000013343SECISBP2L9961.625Oreochromis_niloticus
ENSMUSG00000035093Secisbp2l7550.153ENSONIG00000016931secisbp28748.844Oreochromis_niloticus
ENSMUSG00000035093Secisbp2l9993.647ENSOCUG00000006443SECISBP2L10086.491Oryctolagus_cuniculus
ENSMUSG00000035093Secisbp2l9872.517ENSORLG00000002324SECISBP2L9860.678Oryzias_latipes
ENSMUSG00000035093Secisbp2l7548.512ENSORLG00000000343secisbp25945.592Oryzias_latipes
ENSMUSG00000035093Secisbp2l7548.810ENSORLG00020012878secisbp25745.844Oryzias_latipes_hni
ENSMUSG00000035093Secisbp2l9872.748ENSORLG00020021894SECISBP2L9761.417Oryzias_latipes_hni
ENSMUSG00000035093Secisbp2l9872.748ENSORLG00015021578SECISBP2L9860.623Oryzias_latipes_hsok
ENSMUSG00000035093Secisbp2l7548.930ENSOMEG00000008595secisbp25544.417Oryzias_melastigma
ENSMUSG00000035093Secisbp2l9175.773ENSOMEG00000009535SECISBP2L9769.605Oryzias_melastigma
ENSMUSG00000035093Secisbp2l9993.176ENSOGAG00000013280SECISBP2L9986.285Otolemur_garnettii
ENSMUSG00000035093Secisbp2l9993.647ENSOARG00000021008SECISBP2L9986.182Ovis_aries
ENSMUSG00000035093Secisbp2l9993.647ENSPPAG00000036433SECISBP2L10087.466Pan_paniscus
ENSMUSG00000035093Secisbp2l9992.706ENSPPRG00000020790SECISBP2L9887.454Panthera_pardus
ENSMUSG00000035093Secisbp2l9992.706ENSPTIG00000020397SECISBP2L9889.593Panthera_tigris_altaica
ENSMUSG00000035093Secisbp2l9993.647ENSPTRG00000007050SECISBP2L10087.375Pan_troglodytes
ENSMUSG00000035093Secisbp2l9993.647ENSPANG00000017735SECISBP2L10087.284Papio_anubis
ENSMUSG00000035093Secisbp2l9775.177ENSPKIG00000020244SECISBP2L9961.973Paramormyrops_kingsleyae
ENSMUSG00000035093Secisbp2l9984.038ENSPSIG00000011270SECISBP2L9976.309Pelodiscus_sinensis
ENSMUSG00000035093Secisbp2l9075.584ENSPMGG00000023554SECISBP2L9659.277Periophthalmus_magnuspinnatus
ENSMUSG00000035093Secisbp2l9994.353ENSPEMG00000010577Secisbp2l9991.736Peromyscus_maniculatus_bairdii
ENSMUSG00000035093Secisbp2l9986.353ENSPCIG00000018047SECISBP2L9982.759Phascolarctos_cinereus
ENSMUSG00000035093Secisbp2l9872.979ENSPFOG00000004217SECISBP2L9960.075Poecilia_formosa
ENSMUSG00000035093Secisbp2l7748.235ENSPFOG00000008146secisbp26048.611Poecilia_formosa
ENSMUSG00000035093Secisbp2l9872.811ENSPLAG00000017301SECISBP2L9670.671Poecilia_latipinna
ENSMUSG00000035093Secisbp2l7750.588ENSPLAG00000004505secisbp28247.268Poecilia_latipinna
ENSMUSG00000035093Secisbp2l9873.041ENSPMEG00000000627SECISBP2L9859.725Poecilia_mexicana
ENSMUSG00000035093Secisbp2l9873.041ENSPREG00000008660SECISBP2L9460.117Poecilia_reticulata
ENSMUSG00000035093Secisbp2l9993.647ENSPPYG00000006459SECISBP2L10087.466Pongo_abelii
ENSMUSG00000035093Secisbp2l6277.778ENSPCAG00000009162-6277.778Procavia_capensis
ENSMUSG00000035093Secisbp2l9992.235ENSPVAG00000011821SECISBP2L9985.831Pteropus_vampyrus
ENSMUSG00000035093Secisbp2l9872.120ENSPNYG00000008760SECISBP2L9661.718Pundamilia_nyererei
ENSMUSG00000035093Secisbp2l7547.262ENSPNAG00000029922secisbp25146.547Pygocentrus_nattereri
ENSMUSG00000035093Secisbp2l9996.934ENSRNOG00000008629Secisbp2l10094.399Rattus_norvegicus
ENSMUSG00000035093Secisbp2l9993.647ENSRBIG00000030953SECISBP2L10087.103Rhinopithecus_bieti
ENSMUSG00000035093Secisbp2l9993.647ENSRROG00000042289SECISBP2L10087.284Rhinopithecus_roxellana
ENSMUSG00000035093Secisbp2l9993.176ENSSBOG00000024354SECISBP2L9987.182Saimiri_boliviensis_boliviensis
ENSMUSG00000035093Secisbp2l9986.353ENSSHAG00000016105SECISBP2L9980.311Sarcophilus_harrisii
ENSMUSG00000035093Secisbp2l9775.059ENSSFOG00015017673SECISBP2L9760.637Scleropages_formosus
ENSMUSG00000035093Secisbp2l9776.010ENSSFOG00015013377secisbp2l9273.511Scleropages_formosus
ENSMUSG00000035093Secisbp2l9643.023ENSSMAG00000008472secisbp26245.433Scophthalmus_maximus
ENSMUSG00000035093Secisbp2l9774.126ENSSMAG00000021285SECISBP2L9662.280Scophthalmus_maximus
ENSMUSG00000035093Secisbp2l9774.126ENSSDUG00000016367SECISBP2L9861.525Seriola_dumerili
ENSMUSG00000035093Secisbp2l7748.529ENSSDUG00000002089secisbp25144.550Seriola_dumerili
ENSMUSG00000035093Secisbp2l9774.359ENSSLDG00000009089SECISBP2L9971.581Seriola_lalandi_dorsalis
ENSMUSG00000035093Secisbp2l7748.955ENSSLDG00000003510secisbp25145.024Seriola_lalandi_dorsalis
ENSMUSG00000035093Secisbp2l82100.000ENSSARG00000010659-6687.533Sorex_araneus
ENSMUSG00000035093Secisbp2l9976.706ENSSPUG00000011486SECISBP2L9973.881Sphenodon_punctatus
ENSMUSG00000035093Secisbp2l9873.963ENSSPAG00000019869SECISBP2L9861.848Stegastes_partitus
ENSMUSG00000035093Secisbp2l8447.107ENSSPAG00000013606secisbp25145.803Stegastes_partitus
ENSMUSG00000035093Secisbp2l9993.412ENSSSCG00000004653SECISBP2L9988.632Sus_scrofa
ENSMUSG00000035093Secisbp2l7750.000ENSTGUG00000000440SECISBP26651.206Taeniopygia_guttata
ENSMUSG00000035093Secisbp2l9984.670ENSTGUG00000007252-10078.612Taeniopygia_guttata
ENSMUSG00000035093Secisbp2l7550.000ENSTRUG00000016835secisbp25049.454Takifugu_rubripes
ENSMUSG00000035093Secisbp2l9773.193ENSTRUG00000016925SECISBP2L9571.362Takifugu_rubripes
ENSMUSG00000035093Secisbp2l7348.615ENSTNIG00000015576secisbp27747.989Tetraodon_nigroviridis
ENSMUSG00000035093Secisbp2l9774.048ENSTNIG00000009531SECISBP2L9960.600Tetraodon_nigroviridis
ENSMUSG00000035093Secisbp2l9993.396ENSTTRG00000009412SECISBP2L9986.364Tursiops_truncatus
ENSMUSG00000035093Secisbp2l9993.412ENSUMAG00000014412SECISBP2L9985.506Ursus_maritimus
ENSMUSG00000035093Secisbp2l9992.941ENSVPAG00000008350SECISBP2L9985.321Vicugna_pacos
ENSMUSG00000035093Secisbp2l9993.412ENSVVUG00000016354SECISBP2L9788.164Vulpes_vulpes
ENSMUSG00000035093Secisbp2l9977.176ENSXETG00000008783secisbp2l9670.058Xenopus_tropicalis
ENSMUSG00000035093Secisbp2l7648.193ENSXETG00000029955SECISBP26548.619Xenopus_tropicalis
ENSMUSG00000035093Secisbp2l8977.461ENSXCOG00000018386SECISBP2L9858.718Xiphophorus_couchianus
ENSMUSG00000035093Secisbp2l7546.130ENSXCOG00000009547secisbp26445.559Xiphophorus_couchianus
ENSMUSG00000035093Secisbp2l9773.660ENSXMAG00000002266SECISBP2L9660.056Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0001514selenocysteine incorporation21873635.IBAProcess
GO:0003730mRNA 3'-UTR binding21873635.IBAFunction
GO:0035368selenocysteine insertion sequence binding21873635.IBAFunction
GO:0043021ribonucleoprotein complex binding21873635.IBAFunction
GO:1990904ribonucleoprotein complex21873635.IBAComponent

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