EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000035164 (Gene tree)
Gene ID: 244871
Gene Symbol: Zc3h12c
Alias: C230027N18Rik
Full Name: zinc finger CCCH type containing 12C
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 57229 bases
Position: chr9:52111344-52168572
Accession: 3026959
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000150821	RNase_Zc3h12a	PF11977.8	7.9e-65	1	1
ENSMUSP00000127603	RNase_Zc3h12a	PF11977.8	8.3e-65	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000213645	-	6764	XM_006510333	ENSMUSP00000150821	884 (aa)	XP_006510396	Q5DTV4
ENSMUST00000165519	-	6133	-	ENSMUSP00000127603	903 (aa)	-	E9Q1I3

Gene Model

Click here to download ENSMUSG00000035164's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000035164's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000035164	Zc3h12c	91	52.727	ENSMUSG00000035045	Zc3h12b	66	88.571

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000035164	Zc3h12c	99	92.588	ENSG00000149289	ZC3H12C	100	92.723	Homo_sapiens
ENSMUSG00000035164	Zc3h12c	99	92.352	ENSAMEG00000009188	ZC3H12C	99	92.352	Ailuropoda_melanoleuca
ENSMUSG00000035164	Zc3h12c	71	87.840	ENSAPLG00000002854	ZC3H12C	100	87.840	Anas_platyrhynchos
ENSMUSG00000035164	Zc3h12c	99	82.260	ENSACAG00000001031	ZC3H12C	98	82.260	Anolis_carolinensis
ENSMUSG00000035164	Zc3h12c	99	92.930	ENSANAG00000026999	ZC3H12C	99	92.930	Aotus_nancymaae
ENSMUSG00000035164	Zc3h12c	100	90.847	ENSBTAG00000008732	ZC3H12C	100	90.847	Bos_taurus
ENSMUSG00000035164	Zc3h12c	99	92.588	ENSCJAG00000010319	ZC3H12C	99	92.588	Callithrix_jacchus
ENSMUSG00000035164	Zc3h12c	99	89.510	ENSCAFG00000014297	ZC3H12C	99	89.510	Canis_familiaris
ENSMUSG00000035164	Zc3h12c	99	89.510	ENSCAFG00020006999	ZC3H12C	99	89.205	Canis_lupus_dingo
ENSMUSG00000035164	Zc3h12c	100	91.073	ENSCHIG00000021221	ZC3H12C	100	91.073	Capra_hircus
ENSMUSG00000035164	Zc3h12c	95	90.812	ENSTSYG00000005412	ZC3H12C	99	90.951	Carlito_syrichta
ENSMUSG00000035164	Zc3h12c	99	89.408	ENSCAPG00000011610	ZC3H12C	99	89.612	Cavia_aperea
ENSMUSG00000035164	Zc3h12c	99	89.498	ENSCPOG00000032962	ZC3H12C	99	89.498	Cavia_porcellus
ENSMUSG00000035164	Zc3h12c	100	92.760	ENSCCAG00000022395	ZC3H12C	100	92.958	Cebus_capucinus
ENSMUSG00000035164	Zc3h12c	100	92.308	ENSCATG00000041641	ZC3H12C	100	92.308	Cercocebus_atys
ENSMUSG00000035164	Zc3h12c	99	92.580	ENSCLAG00000012577	ZC3H12C	100	92.723	Chinchilla_lanigera
ENSMUSG00000035164	Zc3h12c	100	91.855	ENSCSAG00000002945	ZC3H12C	100	91.855	Chlorocebus_sabaeus
ENSMUSG00000035164	Zc3h12c	99	85.324	ENSCHOG00000013202	-	100	85.407	Choloepus_hoffmanni
ENSMUSG00000035164	Zc3h12c	99	83.918	ENSCPBG00000021043	ZC3H12C	100	84.463	Chrysemys_picta_bellii
ENSMUSG00000035164	Zc3h12c	99	92.237	ENSCANG00000040994	ZC3H12C	99	92.237	Colobus_angolensis_palliatus
ENSMUSG00000035164	Zc3h12c	100	96.267	ENSCGRG00001013672	Zc3h12c	100	96.267	Cricetulus_griseus_chok1gshd
ENSMUSG00000035164	Zc3h12c	99	96.233	ENSCGRG00000001308	Zc3h12c	100	96.231	Cricetulus_griseus_crigri
ENSMUSG00000035164	Zc3h12c	99	89.749	ENSDNOG00000013040	ZC3H12C	99	89.749	Dasypus_novemcinctus
ENSMUSG00000035164	Zc3h12c	99	91.438	ENSDORG00000009134	Zc3h12c	99	91.438	Dipodomys_ordii
ENSMUSG00000035164	Zc3h12c	71	95.680	ENSETEG00000008027	ZC3H12C	100	95.680	Echinops_telfairi
ENSMUSG00000035164	Zc3h12c	100	92.534	ENSEASG00005010098	ZC3H12C	100	92.534	Equus_asinus_asinus
ENSMUSG00000035164	Zc3h12c	99	92.474	ENSECAG00000000462	ZC3H12C	100	92.606	Equus_caballus
ENSMUSG00000035164	Zc3h12c	64	90.702	ENSEEUG00000005709	-	99	90.702	Erinaceus_europaeus
ENSMUSG00000035164	Zc3h12c	99	90.878	ENSFCAG00000010665	ZC3H12C	99	90.878	Felis_catus
ENSMUSG00000035164	Zc3h12c	99	82.957	ENSFALG00000008776	ZC3H12C	99	83.012	Ficedula_albicollis
ENSMUSG00000035164	Zc3h12c	99	92.808	ENSFDAG00000017997	ZC3H12C	100	93.310	Fukomys_damarensis
ENSMUSG00000035164	Zc3h12c	96	83.197	ENSGALG00000017154	ZC3H12C	100	83.197	Gallus_gallus
ENSMUSG00000035164	Zc3h12c	95	82.738	ENSGAGG00000024154	ZC3H12C	86	83.114	Gopherus_agassizii
ENSMUSG00000035164	Zc3h12c	99	92.474	ENSGGOG00000010117	ZC3H12C	99	92.474	Gorilla_gorilla
ENSMUSG00000035164	Zc3h12c	100	93.100	ENSHGLG00000019021	ZC3H12C	100	93.100	Heterocephalus_glaber_female
ENSMUSG00000035164	Zc3h12c	100	93.100	ENSHGLG00100007295	ZC3H12C	100	93.100	Heterocephalus_glaber_male
ENSMUSG00000035164	Zc3h12c	100	94.352	ENSSTOG00000022143	ZC3H12C	100	95.091	Ictidomys_tridecemlineatus
ENSMUSG00000035164	Zc3h12c	99	94.064	ENSJJAG00000001147	Zc3h12c	100	94.064	Jaculus_jaculus
ENSMUSG00000035164	Zc3h12c	99	74.776	ENSLACG00000009305	ZC3H12C	99	74.776	Latimeria_chalumnae
ENSMUSG00000035164	Zc3h12c	71	95.056	ENSLAFG00000016296	ZC3H12C	100	95.056	Loxodonta_africana
ENSMUSG00000035164	Zc3h12c	100	92.308	ENSMFAG00000042068	ZC3H12C	100	92.308	Macaca_fascicularis
ENSMUSG00000035164	Zc3h12c	99	92.474	ENSMMUG00000048435	ZC3H12C	99	92.474	Macaca_mulatta
ENSMUSG00000035164	Zc3h12c	100	92.308	ENSMNEG00000032663	ZC3H12C	100	92.606	Macaca_nemestrina
ENSMUSG00000035164	Zc3h12c	99	92.360	ENSMLEG00000032083	ZC3H12C	99	92.360	Mandrillus_leucophaeus
ENSMUSG00000035164	Zc3h12c	99	82.106	ENSMGAG00000015143	ZC3H12C	99	82.200	Meleagris_gallopavo
ENSMUSG00000035164	Zc3h12c	100	95.133	ENSMAUG00000020412	Zc3h12c	100	95.133	Mesocricetus_auratus
ENSMUSG00000035164	Zc3h12c	100	93.439	ENSMICG00000011455	ZC3H12C	100	93.897	Microcebus_murinus
ENSMUSG00000035164	Zc3h12c	100	96.456	ENSMOCG00000020090	Zc3h12c	100	96.456	Microtus_ochrogaster
ENSMUSG00000035164	Zc3h12c	96	88.201	ENSMODG00000014555	ZC3H12C	100	88.201	Monodelphis_domestica
ENSMUSG00000035164	Zc3h12c	100	98.893	MGP_CAROLIEiJ_G0032210	Zc3h12c	100	98.893	Mus_caroli
ENSMUSG00000035164	Zc3h12c	100	97.398	MGP_PahariEiJ_G0015078	Zc3h12c	100	97.398	Mus_pahari
ENSMUSG00000035164	Zc3h12c	100	99.336	MGP_SPRETEiJ_G0033350	Zc3h12c	100	99.336	Mus_spretus
ENSMUSG00000035164	Zc3h12c	100	86.600	ENSMPUG00000005888	ZC3H12C	100	86.600	Mustela_putorius_furo
ENSMUSG00000035164	Zc3h12c	99	91.667	ENSMLUG00000017189	ZC3H12C	100	91.667	Myotis_lucifugus
ENSMUSG00000035164	Zc3h12c	100	93.798	ENSNGAG00000023957	Zc3h12c	100	93.798	Nannospalax_galili
ENSMUSG00000035164	Zc3h12c	99	92.702	ENSNLEG00000029829	ZC3H12C	99	92.702	Nomascus_leucogenys
ENSMUSG00000035164	Zc3h12c	99	84.528	ENSMEUG00000015398	ZC3H12C	100	84.528	Notamacropus_eugenii
ENSMUSG00000035164	Zc3h12c	74	81.413	ENSOPRG00000003370	-	98	81.413	Ochotona_princeps
ENSMUSG00000035164	Zc3h12c	99	89.749	ENSODEG00000011026	ZC3H12C	100	89.749	Octodon_degus
ENSMUSG00000035164	Zc3h12c	71	84.494	ENSOANG00000006242	-	99	84.494	Ornithorhynchus_anatinus
ENSMUSG00000035164	Zc3h12c	99	92.930	ENSOCUG00000005283	ZC3H12C	99	92.930	Oryctolagus_cuniculus
ENSMUSG00000035164	Zc3h12c	99	92.702	ENSOGAG00000013223	ZC3H12C	99	92.702	Otolemur_garnettii
ENSMUSG00000035164	Zc3h12c	99	86.902	ENSOARG00000012999	ZC3H12C	97	92.246	Ovis_aries
ENSMUSG00000035164	Zc3h12c	99	92.816	ENSPPAG00000041914	ZC3H12C	99	92.816	Pan_paniscus
ENSMUSG00000035164	Zc3h12c	99	90.650	ENSPPRG00000006582	ZC3H12C	99	90.650	Panthera_pardus
ENSMUSG00000035164	Zc3h12c	86	88.162	ENSPTIG00000009995	ZC3H12C	99	88.162	Panthera_tigris_altaica
ENSMUSG00000035164	Zc3h12c	99	92.816	ENSPTRG00000050494	ZC3H12C	99	92.816	Pan_troglodytes
ENSMUSG00000035164	Zc3h12c	100	92.308	ENSPANG00000023930	ZC3H12C	100	92.308	Papio_anubis
ENSMUSG00000035164	Zc3h12c	96	83.102	ENSPSIG00000005959	ZC3H12C	100	83.565	Pelodiscus_sinensis
ENSMUSG00000035164	Zc3h12c	100	87.093	ENSPEMG00000008502	Zc3h12c	100	95.269	Peromyscus_maniculatus_bairdii
ENSMUSG00000035164	Zc3h12c	96	88.201	ENSPCIG00000022169	ZC3H12C	100	88.201	Phascolarctos_cinereus
ENSMUSG00000035164	Zc3h12c	96	92.606	ENSPPYG00000003851	ZC3H12C	100	92.606	Pongo_abelii
ENSMUSG00000035164	Zc3h12c	64	94.912	ENSPCAG00000015682	ZC3H12C	100	94.912	Procavia_capensis
ENSMUSG00000035164	Zc3h12c	99	93.957	ENSPCOG00000024737	ZC3H12C	99	93.957	Propithecus_coquereli
ENSMUSG00000035164	Zc3h12c	99	91.023	ENSPVAG00000014329	ZC3H12C	99	91.023	Pteropus_vampyrus
ENSMUSG00000035164	Zc3h12c	100	96.678	ENSRNOG00000012470	Zc3h12c	100	96.678	Rattus_norvegicus
ENSMUSG00000035164	Zc3h12c	99	92.352	ENSRBIG00000040441	ZC3H12C	100	92.371	Rhinopithecus_bieti
ENSMUSG00000035164	Zc3h12c	99	92.352	ENSRROG00000004335	ZC3H12C	99	92.352	Rhinopithecus_roxellana
ENSMUSG00000035164	Zc3h12c	99	93.158	ENSSBOG00000025582	ZC3H12C	100	93.192	Saimiri_boliviensis_boliviensis
ENSMUSG00000035164	Zc3h12c	99	85.244	ENSSHAG00000005597	ZC3H12C	100	87.967	Sarcophilus_harrisii
ENSMUSG00000035164	Zc3h12c	71	95.534	ENSSARG00000003433	ZC3H12C	100	95.534	Sorex_araneus
ENSMUSG00000035164	Zc3h12c	99	84.886	ENSSPUG00000001832	ZC3H12C	99	84.886	Sphenodon_punctatus
ENSMUSG00000035164	Zc3h12c	100	92.655	ENSSSCG00000015014	ZC3H12C	100	92.966	Sus_scrofa
ENSMUSG00000035164	Zc3h12c	72	86.250	ENSTGUG00000011244	ZC3H12C	100	86.250	Taeniopygia_guttata
ENSMUSG00000035164	Zc3h12c	99	92.580	ENSTTRG00000005096	ZC3H12C	100	92.580	Tursiops_truncatus
ENSMUSG00000035164	Zc3h12c	99	93.037	ENSUAMG00000006051	ZC3H12C	99	92.948	Ursus_americanus
ENSMUSG00000035164	Zc3h12c	99	92.605	ENSUMAG00000007283	ZC3H12C	99	92.605	Ursus_maritimus
ENSMUSG00000035164	Zc3h12c	88	90.720	ENSVPAG00000003110	ZC3H12C	88	90.720	Vicugna_pacos
ENSMUSG00000035164	Zc3h12c	99	70.079	ENSXETG00000033837	ZC3H12C	99	70.662	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003674	molecular_function	-	ND	Function
GO:0004518	nuclease activity	-	IEA	Function
GO:0004519	endonuclease activity	-	IEA	Function
GO:0005575	cellular_component	-	ND	Component
GO:0008150	biological_process	-	ND	Process
GO:0016787	hydrolase activity	-	IEA	Function
GO:0046872	metal ion binding	-	IEA	Function