EuRBPDB

Description

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000134502	-	607	-	-	- (aa)	-	-
ENSMUST00000154717	-	392	-	-	- (aa)	-	-
ENSMUST00000045748	-	2115	-	ENSMUSP00000036604	415 (aa)	-	Q922H2

Gene Model

Protein-Protein Interaction (PPI)

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000035232	Pdk3	92	59.845	FBgn0017558	Pdk	92	59.635	Drosophila_melanogaster
ENSMUSG00000035232	Pdk3	95	69.211	ENSMUSG00000006494	Pdk1	90	69.211	Mus_musculus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0004672	protein kinase activity	-	ISO	Function
GO:0004674	protein serine/threonine kinase activity	-	ISO	Function
GO:0004740	pyruvate dehydrogenase (acetyl-transferring) kinase activity	-	ISO	Function
GO:0005524	ATP binding	-	ISO	Function
GO:0005730	nucleolus	-	ISO	Component
GO:0005739	mitochondrion	14651853.18614015.	HDA	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0005975	carbohydrate metabolic process	-	IEA	Process
GO:0006006	glucose metabolic process	-	IEA	Process
GO:0010510	regulation of acetyl-CoA biosynthetic process from pyruvate	-	ISO	Process
GO:0010906	regulation of glucose metabolic process	-	ISO	Process
GO:0016301	kinase activity	-	IEA	Function
GO:0016310	phosphorylation	-	IEA	Process
GO:0016740	transferase activity	-	IEA	Function
GO:0018105	peptidyl-serine phosphorylation	-	ISO	Process
GO:0035357	peroxisome proliferator activated receptor signaling pathway	-	ISO	Process
GO:0071333	cellular response to glucose stimulus	-	ISO	Process
GO:0071398	cellular response to fatty acid	-	ISO	Process
GO:0097411	hypoxia-inducible factor-1alpha signaling pathway	-	ISO	Process
GO:2000377	regulation of reactive oxygen species metabolic process	-	ISO	Process