EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000035247 (Gene tree)
Gene ID: 207304
Gene Symbol: Hectd1
Alias: A630086P08Rik|b2b327Clo|opm
Full Name: HECT domain E3 ubiquitin protein ligase 1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 85815
Position: chr12: 51743722-51829536
Accession: 2384768
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000042052	-	8988	XM_011244049	ENSMUSP00000046766	2610 (aa)	XP_011242351	F8WIE5
ENSMUST00000179265	-	9012	-	ENSMUSP00000136449	2618 (aa)	-	Q69ZR2
ENSMUST00000220098	-	2575	-	-	- (aa)	-	-
ENSMUST00000217804	-	1447	-	-	- (aa)	-	-
ENSMUST00000218626	-	2895	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000035247's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000035247's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000035247	Hectd1	100	98.927	ENSG00000092148	HECTD1	100	99.028	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001779	natural killer cell differentiation	24855001.	IMP	Process
GO:0001843	neural tube closure	9636176.15755804.17442300.	IMP	Process
GO:0001892	embryonic placenta development	24855001.	IMP	Process
GO:0003170	heart valve development	25807483.	IMP	Process
GO:0003281	ventricular septum development	25807483.	IMP	Process
GO:0004842	ubiquitin-protein transferase activity	-	IEA	Function
GO:0005515	protein binding	22431752.	IPI	Function
GO:0016567	protein ubiquitination	-	IEA	Process
GO:0016740	transferase activity	-	IEA	Function
GO:0035904	aorta development	25807483.	IMP	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:0051865	protein autoubiquitination	22431752.	IMP	Process
GO:0060707	trophoblast giant cell differentiation	24855001.	IMP	Process
GO:0060708	spongiotrophoblast differentiation	24855001.	IMP	Process
GO:0061630	ubiquitin protein ligase activity	22431752.	IDA	Function
GO:0070534	protein K63-linked ubiquitination	21873635.	IBA	Process
GO:0070534	protein K63-linked ubiquitination	22431752.	IDA	Process
GO:0070534	protein K63-linked ubiquitination	22431752.	IMP	Process
GO:1903077	negative regulation of protein localization to plasma membrane	22431752.	IMP	Process