EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Gene Ontology

Description

Ensembl ID: ENSMUSG00000035547 (Gene tree)
Gene ID: 12337
Gene Symbol: Capn5
Alias: -
Full Name: calpain 5
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 56716
Position: chr7: 98121559-98178274
Accession: 1100859
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000134638	-	668	-	-	- (aa)	-	-
ENSMUST00000107112	-	2232	-	ENSMUSP00000102729	640 (aa)	-	O08688
ENSMUST00000040971	-	4498	XM_006507275	ENSMUSP00000048183	640 (aa)	XP_006507338	O08688
ENSMUST00000129430	-	440	-	ENSMUSP00000121200	27 (aa)	-	D3YU84
ENSMUST00000155056	-	382	-	ENSMUSP00000116697	46 (aa)	-	D3Z432

Gene Model

Click here to download ENSMUSG00000035547's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000035547's network

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0004198	calcium-dependent cysteine-type endopeptidase activity	21873635.	IBA	Function
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0006508	proteolysis	21873635.	IBA	Process
GO:0008233	peptidase activity	-	IEA	Function
GO:0008234	cysteine-type peptidase activity	-	IEA	Function
GO:0009986	cell surface	-	ISO	Component
GO:0016787	hydrolase activity	-	IEA	Function
GO:0045202	synapse	-	ISO	Component