EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000035585 (Gene tree)
Gene ID: 66078
Gene Symbol: Tsen34
Alias: 0610027F08Rik|Leng5
Full Name: tRNA splicing endonuclease subunit 34
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 8162 bases
Position: chr7:3692863-3701024
Accession: 1913328
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000046911	tRNA_int_endo	PF01974.17	1e-20	1	1
ENSMUSP00000104267	tRNA_int_endo	PF01974.17	1e-20	1	1
ENSMUSP00000104270	tRNA_int_endo	PF01974.17	1e-20	1	1
ENSMUSP00000145563	tRNA_int_endo	PF01974.17	3.7e-11	1	1
ENSMUSP00000104269	tRNA_int_endo	PF01974.17	4.8e-09	1	1
ENSMUSP00000145965	tRNA_int_endo	PF01974.17	1.3e-07	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000108630	-	1779	XM_017312222	ENSMUSP00000104270	316 (aa)	XP_017167711	Q8BMZ5
ENSMUST00000205734	-	337	-	ENSMUSP00000145687	85 (aa)	-	A0A0U1RNS7
ENSMUST00000155060	-	931	-	ENSMUSP00000118816	167 (aa)	-	D6RH65
ENSMUST00000108627	-	1319	XM_006540280	ENSMUSP00000104267	316 (aa)	XP_006540343	Q8BMZ5
ENSMUST00000147288	-	327	-	ENSMUSP00000145563	109 (aa)	-	A0A0U1RNH2
ENSMUST00000142713	-	709	-	ENSMUSP00000118440	158 (aa)	-	D3YWG5
ENSMUST00000108629	-	1238	-	ENSMUSP00000104269	287 (aa)	-	Q8BMZ5
ENSMUST00000038521	-	1365	-	ENSMUSP00000046911	312 (aa)	-	H7BX14
ENSMUST00000123088	-	720	-	ENSMUSP00000123614	150 (aa)	-	D3YY06
ENSMUST00000139396	-	1162	-	-	- (aa)	-	-
ENSMUST00000205287	-	1375	-	ENSMUSP00000145965	295 (aa)	-	A0A0U1RPF7
ENSMUST00000137204	-	480	-	ENSMUSP00000120403	143 (aa)	-	D3YZ84

Gene Model

Click here to download ENSMUSG00000035585's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000035585's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000035585	Tsen34	100	88.462	ENSG00000170892	TSEN34	100	88.462	Homo_sapiens
ENSMUSG00000035585	Tsen34	94	35.932	ENSAPOG00000012557	-	86	35.932	Acanthochromis_polyacanthus
ENSMUSG00000035585	Tsen34	94	37.288	ENSAPOG00000008579	-	93	37.288	Acanthochromis_polyacanthus
ENSMUSG00000035585	Tsen34	99	38.264	ENSAPOG00000001248	tsen34	93	38.264	Acanthochromis_polyacanthus
ENSMUSG00000035585	Tsen34	87	95.789	ENSAMEG00000004585	TSEN34	100	87.413	Ailuropoda_melanoleuca
ENSMUSG00000035585	Tsen34	99	38.438	ENSACIG00000007110	tsen34	87	38.438	Amphilophus_citrinellus
ENSMUSG00000035585	Tsen34	99	38.710	ENSAOCG00000006905	tsen34	93	38.710	Amphiprion_ocellaris
ENSMUSG00000035585	Tsen34	99	39.032	ENSAPEG00000019171	tsen34	93	38.710	Amphiprion_percula
ENSMUSG00000035585	Tsen34	99	37.421	ENSATEG00000019800	tsen34	97	37.662	Anabas_testudineus
ENSMUSG00000035585	Tsen34	100	45.283	ENSACAG00000016189	TSEN34	100	45.912	Anolis_carolinensis
ENSMUSG00000035585	Tsen34	100	89.423	ENSANAG00000026113	TSEN34	100	89.423	Aotus_nancymaae
ENSMUSG00000035585	Tsen34	80	51.724	ENSACLG00000009661	tsen34	91	37.540	Astatotilapia_calliptera
ENSMUSG00000035585	Tsen34	98	49.533	ENSAMXG00000017568	tsen34	86	39.103	Astyanax_mexicanus
ENSMUSG00000035585	Tsen34	100	88.498	ENSBTAG00000006486	TSEN34	100	88.498	Bos_taurus
ENSMUSG00000035585	Tsen34	98	91.589	ENSCJAG00000001128	TSEN34	100	87.179	Callithrix_jacchus
ENSMUSG00000035585	Tsen34	100	86.076	ENSCAFG00000002675	TSEN34	100	87.220	Canis_familiaris
ENSMUSG00000035585	Tsen34	100	87.821	ENSCAFG00020018350	TSEN34	100	87.821	Canis_lupus_dingo
ENSMUSG00000035585	Tsen34	100	85.577	ENSCHIG00000020705	TSEN34	100	85.577	Capra_hircus
ENSMUSG00000035585	Tsen34	98	85.965	ENSTSYG00000028200	TSEN34	98	85.621	Carlito_syrichta
ENSMUSG00000035585	Tsen34	97	82.143	ENSCAPG00000012811	-	99	78.537	Cavia_aperea
ENSMUSG00000035585	Tsen34	99	81.447	ENSCPOG00000012672	TSEN34	99	81.447	Cavia_porcellus
ENSMUSG00000035585	Tsen34	98	91.589	ENSCCAG00000036023	TSEN34	100	89.103	Cebus_capucinus
ENSMUSG00000035585	Tsen34	96	86.288	ENSCATG00000033390	TSEN34	94	86.288	Cercocebus_atys
ENSMUSG00000035585	Tsen34	100	85.256	ENSCLAG00000000618	TSEN34	100	85.256	Chinchilla_lanigera
ENSMUSG00000035585	Tsen34	100	87.821	ENSCSAG00000001891	TSEN34	100	87.821	Chlorocebus_sabaeus
ENSMUSG00000035585	Tsen34	100	87.821	ENSCANG00000040984	TSEN34	100	87.821	Colobus_angolensis_palliatus
ENSMUSG00000035585	Tsen34	100	93.671	ENSCGRG00001006296	Tsen34	100	93.671	Cricetulus_griseus_chok1gshd
ENSMUSG00000035585	Tsen34	85	98.925	ENSCGRG00000008494	Tsen34	100	88.235	Cricetulus_griseus_crigri
ENSMUSG00000035585	Tsen34	96	38.636	ENSCSEG00000006278	tsen34	86	38.636	Cynoglossus_semilaevis
ENSMUSG00000035585	Tsen34	97	47.170	ENSDARG00000061370	tsen34	89	37.812	Danio_rerio
ENSMUSG00000035585	Tsen34	100	86.538	ENSDNOG00000039332	TSEN34	100	86.218	Dasypus_novemcinctus
ENSMUSG00000035585	Tsen34	100	85.897	ENSDORG00000029071	Tsen34	100	85.897	Dipodomys_ordii
ENSMUSG00000035585	Tsen34	100	87.500	ENSEASG00005021580	TSEN34	100	87.500	Equus_asinus_asinus
ENSMUSG00000035585	Tsen34	100	87.821	ENSECAG00000019651	TSEN34	86	87.500	Equus_caballus
ENSMUSG00000035585	Tsen34	97	84.956	ENSEEUG00000005692	TSEN34	66	81.915	Erinaceus_europaeus
ENSMUSG00000035585	Tsen34	99	37.421	ENSELUG00000006262	tsen34	92	37.421	Esox_lucius
ENSMUSG00000035585	Tsen34	100	87.500	ENSFCAG00000014045	TSEN34	100	87.500	Felis_catus
ENSMUSG00000035585	Tsen34	96	86.364	ENSFDAG00000017995	TSEN34	98	82.490	Fukomys_damarensis
ENSMUSG00000035585	Tsen34	79	53.261	ENSFHEG00000008791	tsen34	91	38.854	Fundulus_heteroclitus
ENSMUSG00000035585	Tsen34	78	48.864	ENSGMOG00000001961	tsen34	68	47.794	Gadus_morhua
ENSMUSG00000035585	Tsen34	99	39.355	ENSGAFG00000016880	tsen34	93	39.355	Gambusia_affinis
ENSMUSG00000035585	Tsen34	99	38.245	ENSGACG00000004800	tsen34	99	38.245	Gasterosteus_aculeatus
ENSMUSG00000035585	Tsen34	100	46.541	ENSGAGG00000008982	TSEN34	73	46.541	Gopherus_agassizii
ENSMUSG00000035585	Tsen34	100	88.462	ENSGGOG00000008197	TSEN34	100	88.462	Gorilla_gorilla
ENSMUSG00000035585	Tsen34	79	52.326	ENSHBUG00000016593	tsen34	82	38.462	Haplochromis_burtoni
ENSMUSG00000035585	Tsen34	100	85.443	ENSHGLG00000017619	TSEN34	100	85.443	Heterocephalus_glaber_female
ENSMUSG00000035585	Tsen34	85	93.548	ENSHGLG00100008719	TSEN34	100	69.085	Heterocephalus_glaber_male
ENSMUSG00000035585	Tsen34	96	38.614	ENSHCOG00000001368	tsen34	81	51.128	Hippocampus_comes
ENSMUSG00000035585	Tsen34	96	37.299	ENSIPUG00000008359	tsen34	85	37.299	Ictalurus_punctatus
ENSMUSG00000035585	Tsen34	100	86.538	ENSSTOG00000023816	TSEN34	100	86.538	Ictidomys_tridecemlineatus
ENSMUSG00000035585	Tsen34	100	90.823	ENSJJAG00000016301	Tsen34	100	90.823	Jaculus_jaculus
ENSMUSG00000035585	Tsen34	99	38.924	ENSKMAG00000007181	tsen34	82	39.935	Kryptolebias_marmoratus
ENSMUSG00000035585	Tsen34	99	39.937	ENSLBEG00000015001	tsen34	94	39.937	Labrus_bergylta
ENSMUSG00000035585	Tsen34	94	52.885	ENSLACG00000013346	-	99	44.583	Latimeria_chalumnae
ENSMUSG00000035585	Tsen34	99	39.490	ENSLOCG00000001887	tsen34	97	39.677	Lepisosteus_oculatus
ENSMUSG00000035585	Tsen34	100	86.792	ENSLAFG00000015215	TSEN34	100	87.066	Loxodonta_africana
ENSMUSG00000035585	Tsen34	100	87.821	ENSMFAG00000044825	TSEN34	100	87.821	Macaca_fascicularis
ENSMUSG00000035585	Tsen34	100	87.821	ENSMMUG00000016571	TSEN34	100	87.821	Macaca_mulatta
ENSMUSG00000035585	Tsen34	100	87.821	ENSMNEG00000045457	TSEN34	100	87.821	Macaca_nemestrina
ENSMUSG00000035585	Tsen34	98	86.842	ENSMLEG00000034295	TSEN34	93	72.241	Mandrillus_leucophaeus
ENSMUSG00000035585	Tsen34	99	38.854	ENSMAMG00000018407	tsen34	95	38.141	Mastacembelus_armatus
ENSMUSG00000035585	Tsen34	80	51.724	ENSMZEG00005002313	tsen34	92	38.462	Maylandia_zebra
ENSMUSG00000035585	Tsen34	100	85.517	ENSMAUG00000019716	Tsen34	91	85.517	Mesocricetus_auratus
ENSMUSG00000035585	Tsen34	100	91.026	ENSMICG00000002409	TSEN34	100	91.026	Microcebus_murinus
ENSMUSG00000035585	Tsen34	100	96.541	ENSMOCG00000022190	Tsen34	100	96.541	Microtus_ochrogaster
ENSMUSG00000035585	Tsen34	81	56.818	ENSMMOG00000009551	tsen34	99	35.238	Mola_mola
ENSMUSG00000035585	Tsen34	99	58.842	ENSMODG00000003984	-	76	60.129	Monodelphis_domestica
ENSMUSG00000035585	Tsen34	94	49.091	ENSMALG00000018918	tsen34	94	37.421	Monopterus_albus
ENSMUSG00000035585	Tsen34	100	99.359	MGP_CAROLIEiJ_G0029099	Tsen34	100	99.359	Mus_caroli
ENSMUSG00000035585	Tsen34	100	99.042	MGP_PahariEiJ_G0020968	Tsen34	100	99.042	Mus_pahari
ENSMUSG00000035585	Tsen34	100	99.684	MGP_SPRETEiJ_G0030152	Tsen34	100	99.684	Mus_spretus
ENSMUSG00000035585	Tsen34	100	88.462	ENSMPUG00000010373	TSEN34	100	88.462	Mustela_putorius_furo
ENSMUSG00000035585	Tsen34	100	86.306	ENSMLUG00000016894	TSEN34	100	86.306	Myotis_lucifugus
ENSMUSG00000035585	Tsen34	90	91.051	ENSNGAG00000016187	Tsen34	97	87.640	Nannospalax_galili
ENSMUSG00000035585	Tsen34	80	51.724	ENSNBRG00000008640	tsen34	99	36.991	Neolamprologus_brichardi
ENSMUSG00000035585	Tsen34	100	87.821	ENSNLEG00000006309	TSEN34	100	87.821	Nomascus_leucogenys
ENSMUSG00000035585	Tsen34	97	63.208	ENSMEUG00000002978	TSEN34	99	60.772	Notamacropus_eugenii
ENSMUSG00000035585	Tsen34	100	80.805	ENSODEG00000000096	TSEN34	100	79.876	Octodon_degus
ENSMUSG00000035585	Tsen34	80	51.724	ENSONIG00000017253	tsen34	98	39.103	Oreochromis_niloticus
ENSMUSG00000035585	Tsen34	96	61.905	ENSOANG00000014747	-	99	52.521	Ornithorhynchus_anatinus
ENSMUSG00000035585	Tsen34	77	55.952	ENSORLG00015012740	tsen34	94	38.291	Oryzias_latipes_hsok
ENSMUSG00000035585	Tsen34	91	49.495	ENSOMEG00000016771	tsen34	92	38.835	Oryzias_melastigma
ENSMUSG00000035585	Tsen34	100	88.462	ENSOGAG00000006966	TSEN34	100	88.462	Otolemur_garnettii
ENSMUSG00000035585	Tsen34	96	78.761	ENSOARG00000002763	TSEN34	95	81.690	Ovis_aries
ENSMUSG00000035585	Tsen34	100	88.141	ENSPPAG00000036935	TSEN34	100	88.141	Pan_paniscus
ENSMUSG00000035585	Tsen34	100	87.821	ENSPPRG00000011779	TSEN34	100	87.821	Panthera_pardus
ENSMUSG00000035585	Tsen34	100	88.462	ENSPTRG00000044768	-	100	88.462	Pan_troglodytes
ENSMUSG00000035585	Tsen34	100	88.462	ENSPTRG00000011448	TSEN34	100	88.462	Pan_troglodytes
ENSMUSG00000035585	Tsen34	100	88.141	ENSPANG00000012101	TSEN34	100	88.141	Papio_anubis
ENSMUSG00000035585	Tsen34	96	38.710	ENSPKIG00000014674	tsen34	90	38.710	Paramormyrops_kingsleyae
ENSMUSG00000035585	Tsen34	100	96.795	ENSPEMG00000014535	Tsen34	100	96.795	Peromyscus_maniculatus_bairdii
ENSMUSG00000035585	Tsen34	79	55.682	ENSPFOG00000008679	tsen34	93	39.048	Poecilia_formosa
ENSMUSG00000035585	Tsen34	99	38.585	ENSPLAG00000017309	tsen34	93	38.217	Poecilia_latipinna
ENSMUSG00000035585	Tsen34	79	55.682	ENSPMEG00000005235	tsen34	93	39.048	Poecilia_mexicana
ENSMUSG00000035585	Tsen34	99	38.658	ENSPREG00000021784	tsen34	93	38.658	Poecilia_reticulata
ENSMUSG00000035585	Tsen34	100	89.103	ENSPPYG00000010376	TSEN34	96	89.103	Pongo_abelii
ENSMUSG00000035585	Tsen34	99	87.781	ENSPCAG00000012359	TSEN34	100	88.103	Procavia_capensis
ENSMUSG00000035585	Tsen34	100	90.705	ENSPCOG00000013843	TSEN34	100	90.705	Propithecus_coquereli
ENSMUSG00000035585	Tsen34	100	83.013	ENSPVAG00000015570	TSEN34	100	83.013	Pteropus_vampyrus
ENSMUSG00000035585	Tsen34	79	53.488	ENSPNYG00000024090	tsen34	72	38.782	Pundamilia_nyererei
ENSMUSG00000035585	Tsen34	99	36.050	ENSPNAG00000028698	tsen34	86	36.050	Pygocentrus_nattereri
ENSMUSG00000035585	Tsen34	100	99.038	ENSRNOG00000059572	Tsen34l1	100	99.038	Rattus_norvegicus
ENSMUSG00000035585	Tsen34	100	99.038	ENSRNOG00000055179	Tsen34	100	99.038	Rattus_norvegicus
ENSMUSG00000035585	Tsen34	100	88.462	ENSRBIG00000034430	TSEN34	100	88.462	Rhinopithecus_bieti
ENSMUSG00000035585	Tsen34	100	88.462	ENSRROG00000024217	TSEN34	100	88.462	Rhinopithecus_roxellana
ENSMUSG00000035585	Tsen34	96	88.963	ENSSBOG00000016017	TSEN34	97	88.926	Saimiri_boliviensis_boliviensis
ENSMUSG00000035585	Tsen34	84	70.652	ENSSHAG00000009295	-	99	59.174	Sarcophilus_harrisii
ENSMUSG00000035585	Tsen34	96	42.857	ENSSFOG00015017579	tsen34	58	46.429	Scleropages_formosus
ENSMUSG00000035585	Tsen34	96	40.594	ENSSMAG00000005214	tsen34	93	40.594	Scophthalmus_maximus
ENSMUSG00000035585	Tsen34	99	38.782	ENSSDUG00000005391	tsen34	91	39.365	Seriola_dumerili
ENSMUSG00000035585	Tsen34	99	39.683	ENSSLDG00000006144	tsen34	88	39.365	Seriola_lalandi_dorsalis
ENSMUSG00000035585	Tsen34	86	93.617	ENSSARG00000005857	TSEN34	79	76.094	Sorex_araneus
ENSMUSG00000035585	Tsen34	100	41.562	ENSSPUG00000008447	TSEN34	100	41.562	Sphenodon_punctatus
ENSMUSG00000035585	Tsen34	99	38.854	ENSSPAG00000010512	tsen34	92	38.535	Stegastes_partitus
ENSMUSG00000035585	Tsen34	100	87.821	ENSSSCG00000003268	TSEN34	100	87.821	Sus_scrofa
ENSMUSG00000035585	Tsen34	94	48.148	ENSTNIG00000011201	tsen34	99	39.432	Tetraodon_nigroviridis
ENSMUSG00000035585	Tsen34	81	53.846	ENSTNIG00000001937	-	99	39.936	Tetraodon_nigroviridis
ENSMUSG00000035585	Tsen34	100	89.103	ENSTTRG00000006571	TSEN34	100	89.103	Tursiops_truncatus
ENSMUSG00000035585	Tsen34	100	87.500	ENSUAMG00000008701	TSEN34	100	88.782	Ursus_americanus
ENSMUSG00000035585	Tsen34	100	87.821	ENSVVUG00000008211	TSEN34	100	87.821	Vulpes_vulpes
ENSMUSG00000035585	Tsen34	100	42.320	ENSXETG00000004597	tsen34	100	42.633	Xenopus_tropicalis
ENSMUSG00000035585	Tsen34	99	38.710	ENSXMAG00000024266	tsen34	93	38.710	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000213	tRNA-intron endonuclease activity	21873635.	IBA	Function
GO:0000214	tRNA-intron endonuclease complex	-	IEA	Component
GO:0000379	tRNA-type intron splice site recognition and cleavage	21873635.	IBA	Process
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0004518	nuclease activity	-	IEA	Function
GO:0005515	protein binding	11591653.	IPI	Function
GO:0005634	nucleus	-	ISO	Component
GO:0006388	tRNA splicing, via endonucleolytic cleavage and ligation	-	IEA	Process
GO:0006397	mRNA processing	-	IEA	Process
GO:0008033	tRNA processing	-	IEA	Process
GO:0016829	lyase activity	-	IEA	Function