EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000035666 (Gene tree)
Gene ID: 269252
Gene Symbol: Gtf3c4
Alias: KAT12
Full Name: general transcription factor IIIC%2C polypeptide 4
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 18062
Position: chr2: 28822299-28840360
Accession: 2138937
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000037117	-	6941	-	ENSMUSP00000042265	817 (aa)	-	Q8BMQ2
ENSMUST00000124390	-	646	-	-	- (aa)	-	-
ENSMUST00000171404	-	7127	XM_006498078	ENSMUSP00000132171	676 (aa)	XP_006498141	E9Q2B0
ENSMUST00000156468	-	677	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000035666's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000035666's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000035666	Gtf3c4	100	94.830	ENSG00000125484	GTF3C4	100	93.187	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000127	transcription factor TFIIIC complex	21873635.	IBA	Component
GO:0000127	transcription factor TFIIIC complex	-	ISO	Component
GO:0003674	molecular_function	-	ND	Function
GO:0003677	DNA binding	-	IEA	Function
GO:0004402	histone acetyltransferase activity	-	IEA	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0008150	biological_process	-	ND	Process
GO:0016740	transferase activity	-	IEA	Function
GO:0016746	transferase activity, transferring acyl groups	-	IEA	Function