EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000035673 (Gene tree)
Gene ID: 216161
Gene Symbol: Sbno2
Alias: Stno
Full Name: strawberry notch 2
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 48580 bases
Position: chr10:80056992-80105571
Accession: 2448490
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000151449	ResIII	PF04851.15	7.8e-07	1	1
ENSMUSP00000151854	ResIII	PF04851.15	2e-06	1	1
ENSMUSP00000041635	ResIII	PF04851.15	2.3e-06	1	1
ENSMUSP00000151590	ResIII	PF04851.15	2.3e-06	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000219258	-	3772	-	ENSMUSP00000151835	115 (aa)	-	A0A1W2P7W9
ENSMUST00000217683	-	2601	-	-	- (aa)	-	-
ENSMUST00000217876	-	2156	-	-	- (aa)	-	-
ENSMUST00000218630	-	3903	-	ENSMUSP00000151854	1230 (aa)	-	A0A1W2P7W8
ENSMUST00000042771	-	4227	XM_006513493	ENSMUSP00000041635	1349 (aa)	XP_006513556	Q7TNB8
ENSMUST00000219260	-	4850	XM_006513492	ENSMUSP00000151590	1349 (aa)	XP_006513555	Q7TNB8
ENSMUST00000218462	-	2131	-	-	- (aa)	-	-
ENSMUST00000217972	-	2462	-	ENSMUSP00000151449	736 (aa)	-	A0A1W2P6Y8
ENSMUST00000218310	-	1409	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000035673's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000035673's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000035673	Sbno2	77	67.800	ENSMUSG00000038095	Sbno1	94	67.982

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000035673	Sbno2	100	83.535	ENSG00000064932	SBNO2	97	83.818	Homo_sapiens
ENSMUSG00000035673	Sbno2	97	66.830	ENSAPOG00000003185	si:ch73-63e15.2	88	67.767	Acanthochromis_polyacanthus
ENSMUSG00000035673	Sbno2	97	66.667	ENSAOCG00000016581	si:ch73-63e15.2	93	69.927	Amphiprion_ocellaris
ENSMUSG00000035673	Sbno2	97	66.585	ENSAPEG00000008862	si:ch73-63e15.2	75	69.217	Amphiprion_percula
ENSMUSG00000035673	Sbno2	97	66.447	ENSATEG00000023838	si:ch73-63e15.2	93	71.053	Anabas_testudineus
ENSMUSG00000035673	Sbno2	92	75.718	ENSAPLG00000007158	SBNO2	100	70.615	Anas_platyrhynchos
ENSMUSG00000035673	Sbno2	56	86.190	ENSACAG00000006370	-	96	87.150	Anolis_carolinensis
ENSMUSG00000035673	Sbno2	100	82.486	ENSANAG00000026685	SBNO2	99	81.120	Aotus_nancymaae
ENSMUSG00000035673	Sbno2	97	66.500	ENSACLG00000005090	si:ch73-63e15.2	75	66.391	Astatotilapia_calliptera
ENSMUSG00000035673	Sbno2	99	65.889	ENSAMXG00000015881	si:ch73-63e15.2	82	69.137	Astyanax_mexicanus
ENSMUSG00000035673	Sbno2	96	66.061	ENSAMXG00000018868	sbno2a	97	69.052	Astyanax_mexicanus
ENSMUSG00000035673	Sbno2	100	84.831	ENSBTAG00000020780	SBNO2	100	82.656	Bos_taurus
ENSMUSG00000035673	Sbno2	99	83.923	ENSCAFG00000019543	SBNO2	100	81.951	Canis_familiaris
ENSMUSG00000035673	Sbno2	99	83.923	ENSCAFG00020017115	SBNO2	99	83.605	Canis_lupus_dingo
ENSMUSG00000035673	Sbno2	100	84.510	ENSCHIG00000026127	SBNO2	100	82.391	Capra_hircus
ENSMUSG00000035673	Sbno2	98	84.468	ENSCAPG00000005731	SBNO2	99	84.302	Cavia_aperea
ENSMUSG00000035673	Sbno2	98	84.393	ENSCPOG00000007477	SBNO2	99	81.473	Cavia_porcellus
ENSMUSG00000035673	Sbno2	100	82.486	ENSCCAG00000037518	SBNO2	99	80.492	Cebus_capucinus
ENSMUSG00000035673	Sbno2	100	83.212	ENSCATG00000037046	SBNO2	99	82.146	Cercocebus_atys
ENSMUSG00000035673	Sbno2	99	84.992	ENSCLAG00000010178	SBNO2	98	88.840	Chinchilla_lanigera
ENSMUSG00000035673	Sbno2	100	84.019	ENSCSAG00000012317	SBNO2	99	81.479	Chlorocebus_sabaeus
ENSMUSG00000035673	Sbno2	94	73.093	ENSCPBG00000008920	SBNO2	82	85.714	Chrysemys_picta_bellii
ENSMUSG00000035673	Sbno2	95	82.799	ENSCANG00000036745	SBNO2	98	83.865	Colobus_angolensis_palliatus
ENSMUSG00000035673	Sbno2	100	93.420	ENSCGRG00001023960	Sbno2	100	93.259	Cricetulus_griseus_chok1gshd
ENSMUSG00000035673	Sbno2	100	95.451	ENSCGRG00000011984	Sbno2	100	95.256	Cricetulus_griseus_crigri
ENSMUSG00000035673	Sbno2	93	66.144	ENSCSEG00000006856	si:ch73-63e15.2	93	65.677	Cynoglossus_semilaevis
ENSMUSG00000035673	Sbno2	97	66.639	ENSCVAG00000005663	si:ch73-63e15.2	76	68.139	Cyprinodon_variegatus
ENSMUSG00000035673	Sbno2	97	63.941	ENSDARG00000098801	sbno2a	94	60.643	Danio_rerio
ENSMUSG00000035673	Sbno2	93	67.539	ENSDARG00000016188	SBNO2	81	66.784	Danio_rerio
ENSMUSG00000035673	Sbno2	99	87.368	ENSDORG00000002916	Sbno2	100	86.293	Dipodomys_ordii
ENSMUSG00000035673	Sbno2	99	83.347	ENSEASG00005021621	SBNO2	98	84.186	Equus_asinus_asinus
ENSMUSG00000035673	Sbno2	99	83.347	ENSECAG00000011827	SBNO2	98	83.950	Equus_caballus
ENSMUSG00000035673	Sbno2	97	66.943	ENSELUG00000020457	si:ch73-63e15.2	80	66.058	Esox_lucius
ENSMUSG00000035673	Sbno2	99	73.074	ENSFALG00000013988	SBNO2	95	71.385	Ficedula_albicollis
ENSMUSG00000035673	Sbno2	98	83.927	ENSFDAG00000015186	SBNO2	100	79.571	Fukomys_damarensis
ENSMUSG00000035673	Sbno2	93	68.352	ENSFHEG00000022262	si:ch73-63e15.2	75	67.767	Fundulus_heteroclitus
ENSMUSG00000035673	Sbno2	92	68.739	ENSGMOG00000007542	si:ch73-63e15.2	97	67.572	Gadus_morhua
ENSMUSG00000035673	Sbno2	99	72.375	ENSGALG00000037522	SBNO2	97	68.036	Gallus_gallus
ENSMUSG00000035673	Sbno2	97	66.250	ENSGAFG00000004860	si:ch73-63e15.2	90	67.418	Gambusia_affinis
ENSMUSG00000035673	Sbno2	92	68.788	ENSGACG00000013190	si:ch73-63e15.2	95	68.534	Gasterosteus_aculeatus
ENSMUSG00000035673	Sbno2	99	72.200	ENSGAGG00000008348	SBNO2	99	68.351	Gopherus_agassizii
ENSMUSG00000035673	Sbno2	97	66.417	ENSHBUG00000010742	si:ch73-63e15.2	76	68.599	Haplochromis_burtoni
ENSMUSG00000035673	Sbno2	99	86.900	ENSHGLG00000008739	SBNO2	100	84.926	Heterocephalus_glaber_female
ENSMUSG00000035673	Sbno2	99	86.628	ENSHGLG00100005269	SBNO2	98	89.094	Heterocephalus_glaber_male
ENSMUSG00000035673	Sbno2	93	67.951	ENSHCOG00000000884	si:ch73-63e15.2	84	68.126	Hippocampus_comes
ENSMUSG00000035673	Sbno2	93	67.128	ENSIPUG00000019672	sbno2	93	70.374	Ictalurus_punctatus
ENSMUSG00000035673	Sbno2	98	66.612	ENSIPUG00000000537	si:ch73-63e15.2	84	68.221	Ictalurus_punctatus
ENSMUSG00000035673	Sbno2	99	86.995	ENSSTOG00000025832	SBNO2	100	85.746	Ictidomys_tridecemlineatus
ENSMUSG00000035673	Sbno2	99	86.564	ENSJJAG00000017397	Sbno2	99	84.440	Jaculus_jaculus
ENSMUSG00000035673	Sbno2	93	68.609	ENSKMAG00000005541	si:ch73-63e15.2	76	68.398	Kryptolebias_marmoratus
ENSMUSG00000035673	Sbno2	93	67.860	ENSLBEG00000025016	si:ch73-63e15.2	96	69.183	Labrus_bergylta
ENSMUSG00000035673	Sbno2	94	59.886	ENSLBEG00000005937	-	99	64.340	Labrus_bergylta
ENSMUSG00000035673	Sbno2	96	63.800	ENSLACG00000012598	SBNO2	99	73.237	Latimeria_chalumnae
ENSMUSG00000035673	Sbno2	99	65.712	ENSLOCG00000004643	si:ch73-63e15.2	84	68.604	Lepisosteus_oculatus
ENSMUSG00000035673	Sbno2	98	78.151	ENSLAFG00000008824	SBNO2	100	78.910	Loxodonta_africana
ENSMUSG00000035673	Sbno2	100	81.906	ENSMFAG00000040030	SBNO2	99	80.277	Macaca_fascicularis
ENSMUSG00000035673	Sbno2	100	83.293	ENSMMUG00000010886	SBNO2	99	81.406	Macaca_mulatta
ENSMUSG00000035673	Sbno2	100	83.132	ENSMNEG00000039927	SBNO2	99	82.055	Macaca_nemestrina
ENSMUSG00000035673	Sbno2	92	83.144	ENSMLEG00000038556	SBNO2	98	83.493	Mandrillus_leucophaeus
ENSMUSG00000035673	Sbno2	93	68.804	ENSMAMG00000018758	si:ch73-63e15.2	74	68.696	Mastacembelus_armatus
ENSMUSG00000035673	Sbno2	97	66.500	ENSMZEG00005010682	si:ch73-63e15.2	75	66.474	Maylandia_zebra
ENSMUSG00000035673	Sbno2	94	75.386	ENSMGAG00000003801	SBNO2	98	70.963	Meleagris_gallopavo
ENSMUSG00000035673	Sbno2	100	93.847	ENSMAUG00000008034	Sbno2	100	93.847	Mesocricetus_auratus
ENSMUSG00000035673	Sbno2	99	85.621	ENSMICG00000013071	SBNO2	99	84.034	Microcebus_murinus
ENSMUSG00000035673	Sbno2	100	95.552	ENSMOCG00000010504	Sbno2	100	95.552	Microtus_ochrogaster
ENSMUSG00000035673	Sbno2	99	75.520	ENSMODG00000005382	SBNO2	100	70.240	Monodelphis_domestica
ENSMUSG00000035673	Sbno2	97	52.851	ENSMALG00000021831	si:ch73-63e15.2	97	63.646	Monopterus_albus
ENSMUSG00000035673	Sbno2	100	98.943	MGP_PahariEiJ_G0030976	Sbno2	100	98.666	Mus_pahari
ENSMUSG00000035673	Sbno2	100	99.512	MGP_SPRETEiJ_G0016381	Sbno2	100	99.481	Mus_spretus
ENSMUSG00000035673	Sbno2	97	78.492	ENSMPUG00000008747	SBNO2	100	83.734	Mustela_putorius_furo
ENSMUSG00000035673	Sbno2	99	90.317	ENSNGAG00000004308	Sbno2	100	87.778	Nannospalax_galili
ENSMUSG00000035673	Sbno2	90	67.026	ENSNBRG00000022968	si:ch73-63e15.2	93	72.418	Neolamprologus_brichardi
ENSMUSG00000035673	Sbno2	93	88.290	ENSNLEG00000001305	SBNO2	99	81.703	Nomascus_leucogenys
ENSMUSG00000035673	Sbno2	77	73.517	ENSMEUG00000013511	-	78	73.517	Notamacropus_eugenii
ENSMUSG00000035673	Sbno2	92	87.071	ENSOPRG00000017238	SBNO2	100	83.850	Ochotona_princeps
ENSMUSG00000035673	Sbno2	97	85.822	ENSODEG00000011822	SBNO2	99	84.123	Octodon_degus
ENSMUSG00000035673	Sbno2	97	66.639	ENSONIG00000002490	si:ch73-63e15.2	91	68.225	Oreochromis_niloticus
ENSMUSG00000035673	Sbno2	93	67.530	ENSORLG00000000913	si:ch73-63e15.2	77	66.926	Oryzias_latipes
ENSMUSG00000035673	Sbno2	93	67.650	ENSORLG00020010978	si:ch73-63e15.2	77	66.926	Oryzias_latipes_hni
ENSMUSG00000035673	Sbno2	93	67.617	ENSORLG00015000202	si:ch73-63e15.2	77	67.098	Oryzias_latipes_hsok
ENSMUSG00000035673	Sbno2	93	67.040	ENSOMEG00000000359	si:ch73-63e15.2	73	66.781	Oryzias_melastigma
ENSMUSG00000035673	Sbno2	100	81.562	ENSOARG00000011130	SBNO2	100	77.972	Ovis_aries
ENSMUSG00000035673	Sbno2	100	82.786	ENSPPAG00000032482	SBNO2	97	82.288	Pan_paniscus
ENSMUSG00000035673	Sbno2	96	85.097	ENSPTRG00000010185	SBNO2	99	82.862	Pan_troglodytes
ENSMUSG00000035673	Sbno2	100	79.645	ENSPANG00000009658	SBNO2	99	78.774	Papio_anubis
ENSMUSG00000035673	Sbno2	85	70.134	ENSPKIG00000009707	-	89	67.116	Paramormyrops_kingsleyae
ENSMUSG00000035673	Sbno2	99	64.639	ENSPKIG00000024201	si:ch73-63e15.2	82	67.601	Paramormyrops_kingsleyae
ENSMUSG00000035673	Sbno2	97	69.452	ENSPSIG00000002852	SBNO2	100	77.665	Pelodiscus_sinensis
ENSMUSG00000035673	Sbno2	92	67.076	ENSPMGG00000014375	si:ch73-63e15.2	87	67.632	Periophthalmus_magnuspinnatus
ENSMUSG00000035673	Sbno2	100	90.828	ENSPEMG00000024122	Sbno2	100	90.674	Peromyscus_maniculatus_bairdii
ENSMUSG00000035673	Sbno2	99	75.500	ENSPCIG00000011264	SBNO2	100	71.034	Phascolarctos_cinereus
ENSMUSG00000035673	Sbno2	97	66.226	ENSPFOG00000004096	si:ch73-63e15.2	99	67.301	Poecilia_formosa
ENSMUSG00000035673	Sbno2	93	68.312	ENSPLAG00000014653	si:ch73-63e15.2	76	67.591	Poecilia_latipinna
ENSMUSG00000035673	Sbno2	97	66.333	ENSPMEG00000002129	si:ch73-63e15.2	90	69.433	Poecilia_mexicana
ENSMUSG00000035673	Sbno2	97	66.446	ENSPREG00000006755	si:ch73-63e15.2	75	65.757	Poecilia_reticulata
ENSMUSG00000035673	Sbno2	97	78.203	ENSPCAG00000012256	SBNO2	99	75.484	Procavia_capensis
ENSMUSG00000035673	Sbno2	99	79.126	ENSPCOG00000015216	SBNO2	100	77.582	Propithecus_coquereli
ENSMUSG00000035673	Sbno2	97	66.500	ENSPNYG00000019926	si:ch73-63e15.2	76	68.599	Pundamilia_nyererei
ENSMUSG00000035673	Sbno2	99	65.966	ENSPNAG00000020260	si:ch73-63e15.2	83	68.103	Pygocentrus_nattereri
ENSMUSG00000035673	Sbno2	99	64.624	ENSPNAG00000026609	sbno2a	82	70.118	Pygocentrus_nattereri
ENSMUSG00000035673	Sbno2	100	97.480	ENSRNOG00000013987	Sbno2	100	97.041	Rattus_norvegicus
ENSMUSG00000035673	Sbno2	99	76.279	ENSRBIG00000009740	SBNO2	95	75.719	Rhinopithecus_bieti
ENSMUSG00000035673	Sbno2	99	77.626	ENSRROG00000044671	SBNO2	98	84.561	Rhinopithecus_roxellana
ENSMUSG00000035673	Sbno2	100	82.324	ENSSBOG00000023562	SBNO2	99	80.660	Saimiri_boliviensis_boliviensis
ENSMUSG00000035673	Sbno2	92	78.188	ENSSHAG00000010241	SBNO2	97	77.768	Sarcophilus_harrisii
ENSMUSG00000035673	Sbno2	93	65.595	ENSSFOG00015005861	si:ch73-63e15.2	92	66.203	Scleropages_formosus
ENSMUSG00000035673	Sbno2	97	66.200	ENSSMAG00000012489	si:ch73-63e15.2	73	68.174	Scophthalmus_maximus
ENSMUSG00000035673	Sbno2	97	66.530	ENSSDUG00000003527	si:ch73-63e15.2	73	68.957	Seriola_dumerili
ENSMUSG00000035673	Sbno2	97	66.612	ENSSLDG00000004623	si:ch73-63e15.2	73	69.043	Seriola_lalandi_dorsalis
ENSMUSG00000035673	Sbno2	93	69.505	ENSSPAG00000017717	si:ch73-63e15.2	74	69.217	Stegastes_partitus
ENSMUSG00000035673	Sbno2	99	85.611	ENSSSCG00000030042	SBNO2	97	85.000	Sus_scrofa
ENSMUSG00000035673	Sbno2	91	68.057	ENSTRUG00000018193	si:ch73-63e15.2	86	67.318	Takifugu_rubripes
ENSMUSG00000035673	Sbno2	65	75.523	ENSTNIG00000000856	si:ch73-63e15.2	92	76.763	Tetraodon_nigroviridis
ENSMUSG00000035673	Sbno2	99	81.421	ENSUAMG00000006568	SBNO2	99	84.353	Ursus_americanus
ENSMUSG00000035673	Sbno2	99	84.164	ENSVVUG00000022823	SBNO2	100	79.813	Vulpes_vulpes
ENSMUSG00000035673	Sbno2	84	70.455	ENSXETG00000021579	sbno2	88	80.249	Xenopus_tropicalis
ENSMUSG00000035673	Sbno2	77	70.063	ENSXCOG00000009209	si:ch73-63e15.2	91	68.969	Xiphophorus_couchianus
ENSMUSG00000035673	Sbno2	97	66.250	ENSXMAG00000012091	si:ch73-63e15.2	81	70.481	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001503	ossification	-	IEA	Process
GO:0002281	macrophage activation involved in immune response	21873635.	IBA	Process
GO:0002281	macrophage activation involved in immune response	18025162.	IMP	Process
GO:0002281	macrophage activation involved in immune response	-	ISO	Process
GO:0005515	protein binding	23980096.	IPI	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0006355	regulation of transcription, DNA-templated	-	IEA	Process
GO:0030154	cell differentiation	-	IEA	Process
GO:0030282	bone mineralization	23980096.	IMP	Process
GO:0030316	osteoclast differentiation	21873635.	IBA	Process
GO:0030316	osteoclast differentiation	23980096.	IMP	Process
GO:0045892	negative regulation of transcription, DNA-templated	21873635.	IBA	Process
GO:0045892	negative regulation of transcription, DNA-templated	18025162.	IMP	Process
GO:0045892	negative regulation of transcription, DNA-templated	-	ISO	Process
GO:0045944	positive regulation of transcription by RNA polymerase II	21873635.	IBA	Process
GO:0045944	positive regulation of transcription by RNA polymerase II	23980096.	IMP	Process
GO:0050727	regulation of inflammatory response	21873635.	IBA	Process
GO:0050727	regulation of inflammatory response	18025162.	IMP	Process
GO:0050727	regulation of inflammatory response	-	ISO	Process
GO:0061430	bone trabecula morphogenesis	23980096.	IMP	Process
GO:0071222	cellular response to lipopolysaccharide	25903009.	IDA	Process
GO:0071348	cellular response to interleukin-11	25903009.	IDA	Process
GO:0071354	cellular response to interleukin-6	21873635.	IBA	Process
GO:0071354	cellular response to interleukin-6	25903009.	IDA	Process
GO:0071354	cellular response to interleukin-6	-	ISO	Process
GO:0072674	multinuclear osteoclast differentiation	23980096.	IMP	Process
GO:0072675	osteoclast fusion	23980096.	IMP	Process
GO:1990830	cellular response to leukemia inhibitory factor	25903009.	IDA	Process