EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000035781 (Gene tree)
Gene ID: 109284
Gene Symbol: R3hdm4
Alias: C030046I01Rik
Full Name: R3H domain containing 4
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 11157 bases
Position: chr10:79910052-79921208
Accession: 1924814
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000044570	R3H	PF01424.22	2.4e-06	1	1
ENSMUSP00000132266	R3H	PF01424.22	2.4e-06	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000171416	-	1543	-	ENSMUSP00000132266	262 (aa)	-	Q4VBF2
ENSMUST00000219867	-	438	-	ENSMUSP00000151679	28 (aa)	-	A0A1W2P7J8
ENSMUST00000219206	-	3509	-	-	- (aa)	-	-
ENSMUST00000218750	-	402	-	ENSMUSP00000151535	122 (aa)	-	A0A1W2P759
ENSMUST00000219358	-	699	-	-	- (aa)	-	-
ENSMUST00000218970	-	435	-	ENSMUSP00000151887	64 (aa)	-	A0A1W2P823
ENSMUST00000045628	-	1898	XM_011243263	ENSMUSP00000044570	262 (aa)	XP_011241565	Q4VBF2
ENSMUST00000217976	-	474	-	ENSMUSP00000151403	71 (aa)	-	A0A1W2P6T7

Gene Model

Click here to download ENSMUSG00000035781's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000035781's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000035781	R3hdm4	100	85.019	ENSG00000198858	R3HDM4	99	83.895	Homo_sapiens
ENSMUSG00000035781	R3hdm4	92	85.950	ENSAMEG00000003001	R3HDM4	99	84.711	Ailuropoda_melanoleuca
ENSMUSG00000035781	R3hdm4	89	55.603	ENSACIG00000004672	r3hdm4	90	54.741	Amphilophus_citrinellus
ENSMUSG00000035781	R3hdm4	88	53.913	ENSATEG00000015913	r3hdm4	90	53.478	Anabas_testudineus
ENSMUSG00000035781	R3hdm4	92	88.430	ENSANAG00000029748	R3HDM4	99	87.603	Aotus_nancymaae
ENSMUSG00000035781	R3hdm4	97	83.594	ENSBTAG00000046406	R3HDM4	99	80.812	Bos_taurus
ENSMUSG00000035781	R3hdm4	92	88.525	ENSCJAG00000020114	R3HDM4	93	86.400	Callithrix_jacchus
ENSMUSG00000035781	R3hdm4	100	81.550	ENSCAFG00000019665	R3HDM4	99	80.443	Canis_familiaris
ENSMUSG00000035781	R3hdm4	100	81.181	ENSCAFG00020016880	R3HDM4	99	80.074	Canis_lupus_dingo
ENSMUSG00000035781	R3hdm4	100	82.657	ENSCHIG00000020110	R3HDM4	97	83.984	Capra_hircus
ENSMUSG00000035781	R3hdm4	95	85.259	ENSCCAG00000019955	R3HDM4	91	84.462	Cebus_capucinus
ENSMUSG00000035781	R3hdm4	100	83.271	ENSCATG00000037269	R3HDM4	99	82.900	Cercocebus_atys
ENSMUSG00000035781	R3hdm4	92	89.669	ENSCLAG00000007094	R3HDM4	99	88.430	Chinchilla_lanigera
ENSMUSG00000035781	R3hdm4	100	84.644	ENSCSAG00000012574	R3HDM4	99	83.521	Chlorocebus_sabaeus
ENSMUSG00000035781	R3hdm4	99	66.160	ENSCPBG00000009805	R3HDM4	99	65.779	Chrysemys_picta_bellii
ENSMUSG00000035781	R3hdm4	96	85.039	ENSCANG00000040439	R3HDM4	89	83.858	Colobus_angolensis_palliatus
ENSMUSG00000035781	R3hdm4	100	92.075	ENSCGRG00001021650	R3hdm4	100	92.453	Cricetulus_griseus_chok1gshd
ENSMUSG00000035781	R3hdm4	100	92.075	ENSCGRG00000013169	R3hdm4	100	92.453	Cricetulus_griseus_crigri
ENSMUSG00000035781	R3hdm4	89	52.790	ENSCSEG00000018211	r3hdm4	90	51.293	Cynoglossus_semilaevis
ENSMUSG00000035781	R3hdm4	99	51.527	ENSCVAG00000017127	r3hdm4	99	51.724	Cyprinodon_variegatus
ENSMUSG00000035781	R3hdm4	92	90.164	ENSDORG00000006605	R3hdm4	99	88.934	Dipodomys_ordii
ENSMUSG00000035781	R3hdm4	94	87.149	ENSEASG00005021556	R3HDM4	88	87.603	Equus_asinus_asinus
ENSMUSG00000035781	R3hdm4	92	88.525	ENSECAG00000000003	R3HDM4	99	83.704	Equus_caballus
ENSMUSG00000035781	R3hdm4	100	83.271	ENSFCAG00000042437	R3HDM4	99	82.156	Felis_catus
ENSMUSG00000035781	R3hdm4	91	67.635	ENSFALG00000013938	R3HDM4	98	68.067	Ficedula_albicollis
ENSMUSG00000035781	R3hdm4	92	88.066	ENSFDAG00000017040	R3HDM4	99	86.831	Fukomys_damarensis
ENSMUSG00000035781	R3hdm4	99	52.290	ENSFHEG00000017636	r3hdm4	99	50.958	Fundulus_heteroclitus
ENSMUSG00000035781	R3hdm4	88	53.247	ENSGMOG00000001231	r3hdm4	95	53.247	Gadus_morhua
ENSMUSG00000035781	R3hdm4	90	65.417	ENSGALG00000001998	R3HDM4	90	65.000	Gallus_gallus
ENSMUSG00000035781	R3hdm4	99	53.257	ENSGAFG00000004173	r3hdm4	99	52.874	Gambusia_affinis
ENSMUSG00000035781	R3hdm4	99	65.019	ENSGAGG00000019698	R3HDM4	99	64.639	Gopherus_agassizii
ENSMUSG00000035781	R3hdm4	92	88.017	ENSGGOG00000008040	R3HDM4	99	86.777	Gorilla_gorilla
ENSMUSG00000035781	R3hdm4	89	55.172	ENSHBUG00000014810	r3hdm4	90	56.034	Haplochromis_burtoni
ENSMUSG00000035781	R3hdm4	100	84.328	ENSHGLG00000016194	R3HDM4	99	83.209	Heterocephalus_glaber_female
ENSMUSG00000035781	R3hdm4	89	55.365	ENSHCOG00000008422	r3hdm4	91	55.128	Hippocampus_comes
ENSMUSG00000035781	R3hdm4	89	54.274	ENSIPUG00000006716	r3hdm4	90	53.219	Ictalurus_punctatus
ENSMUSG00000035781	R3hdm4	92	85.537	ENSSTOG00000023015	R3HDM4	99	86.364	Ictidomys_tridecemlineatus
ENSMUSG00000035781	R3hdm4	100	86.940	ENSJJAG00000012475	R3hdm4	100	85.448	Jaculus_jaculus
ENSMUSG00000035781	R3hdm4	99	51.341	ENSKMAG00000005853	r3hdm4	90	55.603	Kryptolebias_marmoratus
ENSMUSG00000035781	R3hdm4	88	54.113	ENSLBEG00000000730	r3hdm4	90	53.879	Labrus_bergylta
ENSMUSG00000035781	R3hdm4	99	57.034	ENSLACG00000016445	R3HDM4	99	57.034	Latimeria_chalumnae
ENSMUSG00000035781	R3hdm4	89	57.447	ENSLOCG00000002423	r3hdm4	99	53.817	Lepisosteus_oculatus
ENSMUSG00000035781	R3hdm4	98	83.012	ENSLAFG00000017796	R3HDM4	100	80.309	Loxodonta_africana
ENSMUSG00000035781	R3hdm4	100	84.644	ENSMFAG00000044131	R3HDM4	99	83.521	Macaca_fascicularis
ENSMUSG00000035781	R3hdm4	100	78.947	ENSMMUG00000009682	R3HDM4	99	77.820	Macaca_mulatta
ENSMUSG00000035781	R3hdm4	92	88.017	ENSMNEG00000044115	R3HDM4	98	86.777	Macaca_nemestrina
ENSMUSG00000035781	R3hdm4	96	83.203	ENSMLEG00000035693	R3HDM4	94	82.812	Mandrillus_leucophaeus
ENSMUSG00000035781	R3hdm4	77	56.716	ENSMAMG00000005652	r3hdm4	82	56.436	Mastacembelus_armatus
ENSMUSG00000035781	R3hdm4	100	90.189	ENSMAUG00000010611	R3hdm4	100	90.566	Mesocricetus_auratus
ENSMUSG00000035781	R3hdm4	100	84.758	ENSMICG00000010124	R3HDM4	99	83.643	Microcebus_murinus
ENSMUSG00000035781	R3hdm4	100	91.635	ENSMOCG00000002646	R3hdm4	100	91.635	Microtus_ochrogaster
ENSMUSG00000035781	R3hdm4	99	51.341	ENSMMOG00000008253	r3hdm4	99	50.575	Mola_mola
ENSMUSG00000035781	R3hdm4	87	65.801	ENSMODG00000005698	R3HDM4	99	65.368	Monodelphis_domestica
ENSMUSG00000035781	R3hdm4	89	53.879	ENSMALG00000018856	r3hdm4	90	53.879	Monopterus_albus
ENSMUSG00000035781	R3hdm4	100	98.479	MGP_CAROLIEiJ_G0015551	R3hdm4	100	98.479	Mus_caroli
ENSMUSG00000035781	R3hdm4	100	97.719	MGP_PahariEiJ_G0030964	R3hdm4	100	97.719	Mus_pahari
ENSMUSG00000035781	R3hdm4	100	99.237	MGP_SPRETEiJ_G0016369	-	84	99.237	Mus_spretus
ENSMUSG00000035781	R3hdm4	97	82.946	ENSMPUG00000009394	R3HDM4	96	81.783	Mustela_putorius_furo
ENSMUSG00000035781	R3hdm4	89	54.741	ENSNBRG00000004438	r3hdm4	90	55.603	Neolamprologus_brichardi
ENSMUSG00000035781	R3hdm4	85	86.580	ENSNLEG00000001022	R3HDM4	100	83.550	Nomascus_leucogenys
ENSMUSG00000035781	R3hdm4	89	64.979	ENSMEUG00000011020	R3HDM4	99	63.713	Notamacropus_eugenii
ENSMUSG00000035781	R3hdm4	100	84.701	ENSODEG00000011745	R3HDM4	99	83.582	Octodon_degus
ENSMUSG00000035781	R3hdm4	89	55.172	ENSONIG00000012675	r3hdm4	83	56.034	Oreochromis_niloticus
ENSMUSG00000035781	R3hdm4	99	51.527	ENSOMEG00000003005	r3hdm4	90	54.310	Oryzias_melastigma
ENSMUSG00000035781	R3hdm4	99	82.890	ENSOGAG00000025656	R3HDM4	99	81.749	Otolemur_garnettii
ENSMUSG00000035781	R3hdm4	92	87.603	ENSOARG00000009945	R3HDM4	99	86.364	Ovis_aries
ENSMUSG00000035781	R3hdm4	92	88.430	ENSPPAG00000042371	R3HDM4	99	87.190	Pan_paniscus
ENSMUSG00000035781	R3hdm4	100	84.644	ENSPANG00000015203	R3HDM4	99	83.521	Papio_anubis
ENSMUSG00000035781	R3hdm4	86	57.018	ENSPKIG00000007421	r3hdm4	88	53.913	Paramormyrops_kingsleyae
ENSMUSG00000035781	R3hdm4	99	50.190	ENSPMGG00000020467	r3hdm4	93	51.406	Periophthalmus_magnuspinnatus
ENSMUSG00000035781	R3hdm4	92	95.021	ENSPEMG00000008365	Tmem259	99	95.021	Peromyscus_maniculatus_bairdii
ENSMUSG00000035781	R3hdm4	89	56.034	ENSPFOG00000003199	r3hdm4	91	54.741	Poecilia_formosa
ENSMUSG00000035781	R3hdm4	89	56.034	ENSPMEG00000014183	r3hdm4	91	54.741	Poecilia_mexicana
ENSMUSG00000035781	R3hdm4	99	53.257	ENSPREG00000010709	r3hdm4	99	52.107	Poecilia_reticulata
ENSMUSG00000035781	R3hdm4	100	82.397	ENSPPYG00000009297	R3HDM4	99	81.273	Pongo_abelii
ENSMUSG00000035781	R3hdm4	57	86.093	ENSPCAG00000010997	R3HDM4	55	81.457	Procavia_capensis
ENSMUSG00000035781	R3hdm4	100	83.643	ENSPCOG00000016785	R3HDM4	99	82.528	Propithecus_coquereli
ENSMUSG00000035781	R3hdm4	89	55.172	ENSPNYG00000017489	r3hdm4	90	56.034	Pundamilia_nyererei
ENSMUSG00000035781	R3hdm4	100	95.817	ENSRNOG00000011489	R3hdm4	100	95.817	Rattus_norvegicus
ENSMUSG00000035781	R3hdm4	92	88.843	ENSRROG00000028842	R3HDM4	90	87.603	Rhinopithecus_roxellana
ENSMUSG00000035781	R3hdm4	93	84.400	ENSSBOG00000019298	R3HDM4	73	84.000	Saimiri_boliviensis_boliviensis
ENSMUSG00000035781	R3hdm4	55	69.655	ENSSHAG00000003036	-	99	68.966	Sarcophilus_harrisii
ENSMUSG00000035781	R3hdm4	86	54.825	ENSSFOG00015020574	r3hdm4	83	53.509	Scleropages_formosus
ENSMUSG00000035781	R3hdm4	89	54.741	ENSSMAG00000021090	r3hdm4	67	54.506	Scophthalmus_maximus
ENSMUSG00000035781	R3hdm4	89	56.466	ENSSDUG00000008488	r3hdm4	90	56.466	Seriola_dumerili
ENSMUSG00000035781	R3hdm4	89	56.466	ENSSLDG00000025328	r3hdm4	90	56.466	Seriola_lalandi_dorsalis
ENSMUSG00000035781	R3hdm4	96	65.354	ENSSPUG00000005434	R3HDM4	99	64.173	Sphenodon_punctatus
ENSMUSG00000035781	R3hdm4	99	50.575	ENSSPAG00000002562	r3hdm4	99	50.575	Stegastes_partitus
ENSMUSG00000035781	R3hdm4	100	83.026	ENSSSCG00000013419	R3HDM4	99	81.919	Sus_scrofa
ENSMUSG00000035781	R3hdm4	78	63.636	ENSTGUG00000000663	R3HDM4	100	62.679	Taeniopygia_guttata
ENSMUSG00000035781	R3hdm4	92	82.573	ENSTTRG00000001470	R3HDM4	99	82.573	Tursiops_truncatus
ENSMUSG00000035781	R3hdm4	100	72.593	ENSUAMG00000005751	R3HDM4	99	85.586	Ursus_americanus
ENSMUSG00000035781	R3hdm4	100	81.919	ENSVVUG00000022685	R3HDM4	99	80.812	Vulpes_vulpes
ENSMUSG00000035781	R3hdm4	89	47.458	ENSXETG00000033624	R3HDM4	91	47.210	Xenopus_tropicalis
ENSMUSG00000035781	R3hdm4	99	52.672	ENSXCOG00000005127	r3hdm4	99	51.908	Xiphophorus_couchianus
ENSMUSG00000035781	R3hdm4	99	52.874	ENSXMAG00000022875	r3hdm4	99	52.107	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003674	molecular_function	-	ND	Function
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0005575	cellular_component	-	ND	Component
GO:0005634	nucleus	-	IEA	Component
GO:0008150	biological_process	-	ND	Process