EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000035834 (Gene tree)
Gene ID: 67486
Gene Symbol: Polr3g
Alias: 2310047G20Rik|RPC32
Full Name: polymerase (RNA) III (DNA directed) polypeptide G
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 37171 bases
Position: chr13:81673843-81711013
Accession: 1914736
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000035289	RNA_pol_3_Rpc31	PF11705.8	1.3e-33	1	1
ENSMUSP00000125054	RNA_pol_3_Rpc31	PF11705.8	5.3e-14	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000162535	-	2630	-	-	- (aa)	-	-
ENSMUST00000160331	-	658	-	-	- (aa)	-	-
ENSMUST00000161920	-	733	-	ENSMUSP00000125054	160 (aa)	-	Q6NXY9
ENSMUST00000048993	-	3054	-	ENSMUSP00000035289	223 (aa)	-	Q6NXY9
ENSMUST00000161093	-	424	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000035834's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03020	RNA polymerase	KEGG
mmu04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000035834's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000035834	Polr3g	95	46.047	ENSMUSG00000028104	Polr3gl	98	48.899

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000035834	Polr3g	100	85.903	ENSCGRG00001004958	Polr3g	100	86.344	Cricetulus_griseus_chok1gshd
ENSMUSG00000035834	Polr3g	100	85.903	ENSCGRG00000014922	Polr3g	100	86.344	Cricetulus_griseus_crigri
ENSMUSG00000035834	Polr3g	100	86.222	ENSMAUG00000008528	Polr3g	100	84.000	Mesocricetus_auratus
ENSMUSG00000035834	Polr3g	100	82.063	ENSMOCG00000014935	Polr3g	100	82.960	Microtus_ochrogaster
ENSMUSG00000035834	Polr3g	100	98.655	MGP_CAROLIEiJ_G0018745	Polr3g	99	100.000	Mus_caroli
ENSMUSG00000035834	Polr3g	100	95.964	MGP_PahariEiJ_G0015824	Polr3g	100	95.964	Mus_pahari
ENSMUSG00000035834	Polr3g	100	100.000	MGP_SPRETEiJ_G0019628	Polr3g	100	100.000	Mus_spretus
ENSMUSG00000035834	Polr3g	100	86.607	ENSNGAG00000010745	-	100	84.375	Nannospalax_galili
ENSMUSG00000035834	Polr3g	100	91.928	ENSRNOG00000016260	Polr3g	100	91.928	Rattus_norvegicus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000790	nuclear chromatin	21873635.	IBA	Component
GO:0000790	nuclear chromatin	24107381.	IDA	Component
GO:0000790	nuclear chromatin	-	ISO	Component
GO:0002376	immune system process	-	IEA	Process
GO:0003899	DNA-directed 5'-3' RNA polymerase activity	-	IEA	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005666	RNA polymerase III complex	21873635.	IBA	Component
GO:0005666	RNA polymerase III complex	-	ISO	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0006383	transcription by RNA polymerase III	-	ISO	Process
GO:0008283	cell proliferation	21873635.	IBA	Process
GO:0008283	cell proliferation	24107381.	IEP	Process
GO:0008283	cell proliferation	-	ISO	Process
GO:0032728	positive regulation of interferon-beta production	-	ISO	Process
GO:0045087	innate immune response	-	IEA	Process
GO:0045089	positive regulation of innate immune response	-	ISO	Process
GO:0051607	defense response to virus	-	IEA	Process