EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000036086 (Gene tree)
Gene ID: 226409
Gene Symbol: Zranb3
Alias: 4933425L19Rik
Full Name: zinc finger%2C RAN-binding domain containing 3
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 148864 bases
Position: chr1:127954184-128103047
Accession: 1918362
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000083806	ResIII	PF04851.15	1.5e-07	1	1
ENSMUSP00000108157	ResIII	PF04851.15	1.5e-07	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000127393	-	3374	-	-	- (aa)	-	-
ENSMUST00000124876	-	515	-	-	- (aa)	-	-
ENSMUST00000112538	-	4741	XM_006529410	ENSMUSP00000108157	1069 (aa)	XP_006529473	Q6NZP1
ENSMUST00000086614	-	4210	XM_006529408	ENSMUSP00000083806	1069 (aa)	XP_006529471	Q6NZP1
ENSMUST00000131732	-	611	-	-	- (aa)	-	-
ENSMUST00000097597	-	1913	-	-	- (aa)	-	-
ENSMUST00000143389	-	686	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000036086's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000036086's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000036086	Zranb3	100	77.336	ENSG00000121988	ZRANB3	94	85.149	Homo_sapiens
ENSMUSG00000036086	Zranb3	93	60.534	ENSAPOG00000020872	zranb3	99	53.472	Acanthochromis_polyacanthus
ENSMUSG00000036086	Zranb3	95	76.413	ENSAMEG00000016419	ZRANB3	99	76.413	Ailuropoda_melanoleuca
ENSMUSG00000036086	Zranb3	99	54.178	ENSACIG00000018832	zranb3	99	54.455	Amphilophus_citrinellus
ENSMUSG00000036086	Zranb3	99	52.398	ENSAOCG00000005122	zranb3	100	53.032	Amphiprion_ocellaris
ENSMUSG00000036086	Zranb3	99	52.223	ENSAPEG00000016183	zranb3	99	52.485	Amphiprion_percula
ENSMUSG00000036086	Zranb3	96	53.908	ENSATEG00000000257	zranb3	98	53.908	Anabas_testudineus
ENSMUSG00000036086	Zranb3	95	62.441	ENSAPLG00000014815	ZRANB3	99	63.775	Anas_platyrhynchos
ENSMUSG00000036086	Zranb3	98	62.454	ENSACAG00000001934	ZRANB3	98	62.454	Anolis_carolinensis
ENSMUSG00000036086	Zranb3	99	77.116	ENSANAG00000028768	ZRANB3	96	77.495	Aotus_nancymaae
ENSMUSG00000036086	Zranb3	92	61.584	ENSACLG00000027313	zranb3	99	54.275	Astatotilapia_calliptera
ENSMUSG00000036086	Zranb3	98	54.537	ENSAMXG00000003555	zranb3	97	54.444	Astyanax_mexicanus
ENSMUSG00000036086	Zranb3	100	76.137	ENSBTAG00000026842	ZRANB3	97	87.524	Bos_taurus
ENSMUSG00000036086	Zranb3	100	77.151	ENSCJAG00000011678	-	100	77.151	Callithrix_jacchus
ENSMUSG00000036086	Zranb3	56	80.693	ENSCJAG00000016365	-	99	85.910	Callithrix_jacchus
ENSMUSG00000036086	Zranb3	100	76.186	ENSCAFG00000005054	ZRANB3	99	76.186	Canis_familiaris
ENSMUSG00000036086	Zranb3	100	76.186	ENSCAFG00020016080	ZRANB3	99	85.389	Canis_lupus_dingo
ENSMUSG00000036086	Zranb3	100	76.416	ENSCHIG00000025781	ZRANB3	100	76.416	Capra_hircus
ENSMUSG00000036086	Zranb3	57	80.592	ENSCPOG00000010385	-	98	85.049	Cavia_porcellus
ENSMUSG00000036086	Zranb3	100	77.336	ENSCCAG00000012014	ZRANB3	100	77.336	Cebus_capucinus
ENSMUSG00000036086	Zranb3	100	75.393	ENSCATG00000041950	ZRANB3	100	75.393	Cercocebus_atys
ENSMUSG00000036086	Zranb3	98	76.231	ENSCLAG00000006849	ZRANB3	99	76.231	Chinchilla_lanigera
ENSMUSG00000036086	Zranb3	94	77.963	ENSCSAG00000016368	ZRANB3	100	77.963	Chlorocebus_sabaeus
ENSMUSG00000036086	Zranb3	99	62.743	ENSCPBG00000010250	ZRANB3	99	63.577	Chrysemys_picta_bellii
ENSMUSG00000036086	Zranb3	100	73.913	ENSCANG00000031772	ZRANB3	100	73.913	Colobus_angolensis_palliatus
ENSMUSG00000036086	Zranb3	100	86.075	ENSCGRG00001000424	Zranb3	99	86.075	Cricetulus_griseus_chok1gshd
ENSMUSG00000036086	Zranb3	100	86.075	ENSCGRG00000011356	Zranb3	99	86.075	Cricetulus_griseus_crigri
ENSMUSG00000036086	Zranb3	98	53.032	ENSCSEG00000009111	zranb3	93	53.484	Cynoglossus_semilaevis
ENSMUSG00000036086	Zranb3	99	54.545	ENSDARG00000091538	zranb3	99	71.483	Danio_rerio
ENSMUSG00000036086	Zranb3	94	75.510	ENSDNOG00000013613	ZRANB3	99	75.510	Dasypus_novemcinctus
ENSMUSG00000036086	Zranb3	56	74.167	ENSDORG00000004211	-	94	88.920	Dipodomys_ordii
ENSMUSG00000036086	Zranb3	100	76.509	ENSEASG00005007414	ZRANB3	100	76.509	Equus_asinus_asinus
ENSMUSG00000036086	Zranb3	100	76.509	ENSECAG00000011232	ZRANB3	100	76.509	Equus_caballus
ENSMUSG00000036086	Zranb3	85	70.000	ENSEEUG00000011221	ZRANB3	91	70.000	Erinaceus_europaeus
ENSMUSG00000036086	Zranb3	98	52.369	ENSELUG00000014333	zranb3	99	52.885	Esox_lucius
ENSMUSG00000036086	Zranb3	100	75.929	ENSFCAG00000024830	ZRANB3	99	75.929	Felis_catus
ENSMUSG00000036086	Zranb3	100	75.974	ENSFDAG00000012573	ZRANB3	100	75.974	Fukomys_damarensis
ENSMUSG00000036086	Zranb3	99	54.764	ENSFHEG00000018772	zranb3	99	54.764	Fundulus_heteroclitus
ENSMUSG00000036086	Zranb3	85	60.496	ENSGMOG00000002692	zranb3	91	60.496	Gadus_morhua
ENSMUSG00000036086	Zranb3	99	53.722	ENSGAFG00000006177	zranb3	99	53.722	Gambusia_affinis
ENSMUSG00000036086	Zranb3	98	55.380	ENSGACG00000014926	zranb3	98	55.844	Gasterosteus_aculeatus
ENSMUSG00000036086	Zranb3	99	63.489	ENSGAGG00000020998	ZRANB3	99	63.489	Gopherus_agassizii
ENSMUSG00000036086	Zranb3	100	77.151	ENSGGOG00000003782	ZRANB3	100	77.151	Gorilla_gorilla
ENSMUSG00000036086	Zranb3	99	55.484	ENSHBUG00000015687	zranb3	99	55.941	Haplochromis_burtoni
ENSMUSG00000036086	Zranb3	100	76.345	ENSHGLG00000015976	ZRANB3	98	76.345	Heterocephalus_glaber_female
ENSMUSG00000036086	Zranb3	100	76.345	ENSHGLG00100001612	ZRANB3	98	76.345	Heterocephalus_glaber_male
ENSMUSG00000036086	Zranb3	99	52.599	ENSHCOG00000013395	zranb3	99	52.807	Hippocampus_comes
ENSMUSG00000036086	Zranb3	95	53.263	ENSIPUG00000013812	zranb3	92	53.578	Ictalurus_punctatus
ENSMUSG00000036086	Zranb3	99	75.210	ENSSTOG00000010155	ZRANB3	99	75.210	Ictidomys_tridecemlineatus
ENSMUSG00000036086	Zranb3	57	82.102	ENSJJAG00000018858	-	99	86.047	Jaculus_jaculus
ENSMUSG00000036086	Zranb3	99	52.853	ENSKMAG00000013326	zranb3	99	53.134	Kryptolebias_marmoratus
ENSMUSG00000036086	Zranb3	99	53.397	ENSLBEG00000027937	zranb3	95	53.746	Labrus_bergylta
ENSMUSG00000036086	Zranb3	98	54.054	ENSLOCG00000001673	zranb3	99	54.323	Lepisosteus_oculatus
ENSMUSG00000036086	Zranb3	99	75.948	ENSLAFG00000015733	ZRANB3	97	87.196	Loxodonta_africana
ENSMUSG00000036086	Zranb3	100	77.151	ENSMFAG00000034071	ZRANB3	96	77.151	Macaca_fascicularis
ENSMUSG00000036086	Zranb3	95	77.702	ENSMMUG00000000765	ZRANB3	99	77.702	Macaca_mulatta
ENSMUSG00000036086	Zranb3	94	74.045	ENSMNEG00000015978	ZRANB3	97	74.045	Macaca_nemestrina
ENSMUSG00000036086	Zranb3	100	74.283	ENSMLEG00000028200	ZRANB3	99	77.767	Mandrillus_leucophaeus
ENSMUSG00000036086	Zranb3	97	52.785	ENSMAMG00000004740	zranb3	98	53.025	Mastacembelus_armatus
ENSMUSG00000036086	Zranb3	99	53.439	ENSMZEG00005003316	zranb3	99	53.717	Maylandia_zebra
ENSMUSG00000036086	Zranb3	93	61.667	ENSMGAG00000012454	ZRANB3	99	60.811	Meleagris_gallopavo
ENSMUSG00000036086	Zranb3	100	85.607	ENSMAUG00000002029	Zranb3	100	85.607	Mesocricetus_auratus
ENSMUSG00000036086	Zranb3	100	78.087	ENSMICG00000013893	ZRANB3	100	78.087	Microcebus_murinus
ENSMUSG00000036086	Zranb3	99	69.039	ENSMODG00000000848	ZRANB3	97	69.039	Monodelphis_domestica
ENSMUSG00000036086	Zranb3	92	60.000	ENSMALG00000009120	zranb3	99	51.340	Monopterus_albus
ENSMUSG00000036086	Zranb3	100	94.481	MGP_PahariEiJ_G0027778	Zranb3	100	94.481	Mus_pahari
ENSMUSG00000036086	Zranb3	100	99.252	MGP_SPRETEiJ_G0015349	Zranb3	100	99.252	Mus_spretus
ENSMUSG00000036086	Zranb3	100	76.000	ENSMPUG00000002528	ZRANB3	100	76.000	Mustela_putorius_furo
ENSMUSG00000036086	Zranb3	87	70.873	ENSMLUG00000009977	ZRANB3	100	70.873	Myotis_lucifugus
ENSMUSG00000036086	Zranb3	100	82.090	ENSNGAG00000010584	Zranb3	100	82.090	Nannospalax_galili
ENSMUSG00000036086	Zranb3	99	54.044	ENSNBRG00000013928	zranb3	99	54.228	Neolamprologus_brichardi
ENSMUSG00000036086	Zranb3	100	77.336	ENSNLEG00000008561	ZRANB3	100	77.336	Nomascus_leucogenys
ENSMUSG00000036086	Zranb3	92	69.577	ENSMEUG00000009722	ZRANB3	92	69.577	Notamacropus_eugenii
ENSMUSG00000036086	Zranb3	97	67.335	ENSOPRG00000001431	ZRANB3	100	67.335	Ochotona_princeps
ENSMUSG00000036086	Zranb3	99	53.665	ENSONIG00000012025	zranb3	100	70.400	Oreochromis_niloticus
ENSMUSG00000036086	Zranb3	99	63.053	ENSOANG00000007986	ZRANB3	97	63.053	Ornithorhynchus_anatinus
ENSMUSG00000036086	Zranb3	85	76.528	ENSOCUG00000007243	ZRANB3	100	76.528	Oryctolagus_cuniculus
ENSMUSG00000036086	Zranb3	99	56.000	ENSORLG00000004324	zranb3	100	55.094	Oryzias_latipes
ENSMUSG00000036086	Zranb3	99	54.391	ENSORLG00020019171	zranb3	98	54.545	Oryzias_latipes_hni
ENSMUSG00000036086	Zranb3	99	55.782	ENSORLG00015017218	zranb3	99	56.134	Oryzias_latipes_hsok
ENSMUSG00000036086	Zranb3	99	55.104	ENSOMEG00000000999	zranb3	98	55.104	Oryzias_melastigma
ENSMUSG00000036086	Zranb3	100	76.230	ENSOARG00000010922	ZRANB3	100	75.415	Ovis_aries
ENSMUSG00000036086	Zranb3	100	77.151	ENSPPAG00000029480	ZRANB3	100	77.151	Pan_paniscus
ENSMUSG00000036086	Zranb3	100	75.811	ENSPPRG00000006011	ZRANB3	100	75.811	Panthera_pardus
ENSMUSG00000036086	Zranb3	100	75.948	ENSPTIG00000014207	ZRANB3	100	75.948	Panthera_tigris_altaica
ENSMUSG00000036086	Zranb3	100	77.058	ENSPTRG00000012492	ZRANB3	100	77.473	Pan_troglodytes
ENSMUSG00000036086	Zranb3	94	76.592	ENSPANG00000007838	ZRANB3	99	76.592	Papio_anubis
ENSMUSG00000036086	Zranb3	99	55.963	ENSPKIG00000011277	zranb3	99	56.055	Paramormyrops_kingsleyae
ENSMUSG00000036086	Zranb3	99	62.940	ENSPSIG00000005377	ZRANB3	98	63.087	Pelodiscus_sinensis
ENSMUSG00000036086	Zranb3	90	55.807	ENSPMGG00000011296	zranb3	95	55.807	Periophthalmus_magnuspinnatus
ENSMUSG00000036086	Zranb3	94	85.262	ENSPEMG00000020506	-	96	85.262	Peromyscus_maniculatus_bairdii
ENSMUSG00000036086	Zranb3	98	52.579	ENSPMAG00000009550	zranb3	100	53.043	Petromyzon_marinus
ENSMUSG00000036086	Zranb3	100	68.498	ENSPCIG00000002444	ZRANB3	100	68.498	Phascolarctos_cinereus
ENSMUSG00000036086	Zranb3	99	54.932	ENSPFOG00000015201	zranb3	99	54.900	Poecilia_formosa
ENSMUSG00000036086	Zranb3	99	54.137	ENSPLAG00000018028	zranb3	99	54.129	Poecilia_latipinna
ENSMUSG00000036086	Zranb3	98	54.494	ENSPMEG00000023931	zranb3	96	54.427	Poecilia_mexicana
ENSMUSG00000036086	Zranb3	99	53.798	ENSPREG00000008183	zranb3	99	53.798	Poecilia_reticulata
ENSMUSG00000036086	Zranb3	100	76.966	ENSPPYG00000012814	ZRANB3	100	76.966	Pongo_abelii
ENSMUSG00000036086	Zranb3	95	70.756	ENSPCOG00000003732	ZRANB3	99	70.617	Propithecus_coquereli
ENSMUSG00000036086	Zranb3	100	72.130	ENSPVAG00000006096	ZRANB3	100	72.130	Pteropus_vampyrus
ENSMUSG00000036086	Zranb3	99	53.967	ENSPNYG00000008630	zranb3	99	54.278	Pundamilia_nyererei
ENSMUSG00000036086	Zranb3	94	55.981	ENSPNAG00000013880	zranb3	100	55.981	Pygocentrus_nattereri
ENSMUSG00000036086	Zranb3	100	86.436	ENSRNOG00000003979	Zranb3	99	86.436	Rattus_norvegicus
ENSMUSG00000036086	Zranb3	94	74.067	ENSRBIG00000039852	ZRANB3	100	74.067	Rhinopithecus_bieti
ENSMUSG00000036086	Zranb3	50	67.528	ENSRROG00000038728	ZRANB3	90	67.528	Rhinopithecus_roxellana
ENSMUSG00000036086	Zranb3	94	77.286	ENSSBOG00000021135	ZRANB3	100	77.286	Saimiri_boliviensis_boliviensis
ENSMUSG00000036086	Zranb3	100	67.860	ENSSHAG00000016465	ZRANB3	98	83.114	Sarcophilus_harrisii
ENSMUSG00000036086	Zranb3	95	53.275	ENSSMAG00000001632	zranb3	98	53.568	Scophthalmus_maximus
ENSMUSG00000036086	Zranb3	97	53.426	ENSSDUG00000010804	zranb3	98	53.652	Seriola_dumerili
ENSMUSG00000036086	Zranb3	95	61.868	ENSSPUG00000004049	ZRANB3	92	77.311	Sphenodon_punctatus
ENSMUSG00000036086	Zranb3	98	55.028	ENSSPAG00000004802	zranb3	95	67.092	Stegastes_partitus
ENSMUSG00000036086	Zranb3	100	76.973	ENSSSCG00000015694	ZRANB3	100	76.973	Sus_scrofa
ENSMUSG00000036086	Zranb3	98	61.994	ENSTGUG00000011743	ZRANB3	100	62.323	Taeniopygia_guttata
ENSMUSG00000036086	Zranb3	98	53.867	ENSTRUG00000011885	zranb3	98	54.030	Takifugu_rubripes
ENSMUSG00000036086	Zranb3	98	57.223	ENSTNIG00000010363	zranb3	98	57.399	Tetraodon_nigroviridis
ENSMUSG00000036086	Zranb3	100	72.895	ENSTTRG00000003932	ZRANB3	100	72.895	Tursiops_truncatus
ENSMUSG00000036086	Zranb3	55	79.661	ENSUAMG00000018717	-	96	79.661	Ursus_americanus
ENSMUSG00000036086	Zranb3	100	76.000	ENSUMAG00000005407	ZRANB3	97	85.575	Ursus_maritimus
ENSMUSG00000036086	Zranb3	100	74.098	ENSVPAG00000001487	ZRANB3	100	74.098	Vicugna_pacos
ENSMUSG00000036086	Zranb3	93	85.139	ENSVVUG00000006362	ZRANB3	99	85.139	Vulpes_vulpes
ENSMUSG00000036086	Zranb3	99	53.784	ENSXMAG00000007875	zranb3	99	53.950	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003824	catalytic activity	-	IEA	Function
GO:0004386	helicase activity	-	IEA	Function
GO:0004518	nuclease activity	-	IEA	Function
GO:0004519	endonuclease activity	-	IEA	Function
GO:0004520	endodeoxyribonuclease activity	21873635.	IBA	Function
GO:0004520	endodeoxyribonuclease activity	-	ISO	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005694	chromosome	-	IEA	Component
GO:0006281	DNA repair	21873635.	IBA	Process
GO:0006281	DNA repair	-	ISO	Process
GO:0006974	cellular response to DNA damage stimulus	21873635.	IBA	Process
GO:0006974	cellular response to DNA damage stimulus	-	ISO	Process
GO:0008152	metabolic process	-	IEA	Process
GO:0009411	response to UV	-	ISO	Process
GO:0016787	hydrolase activity	-	IEA	Function
GO:0031297	replication fork processing	21873635.	IBA	Process
GO:0031297	replication fork processing	-	ISO	Process
GO:0036292	DNA rewinding	21873635.	IBA	Process
GO:0036292	DNA rewinding	-	ISO	Process
GO:0036310	annealing helicase activity	21873635.	IBA	Function
GO:0036310	annealing helicase activity	-	ISO	Function
GO:0043596	nuclear replication fork	21873635.	IBA	Component
GO:0043596	nuclear replication fork	-	ISO	Component
GO:0045910	negative regulation of DNA recombination	-	ISO	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:0048478	replication fork protection	21873635.	IBA	Process
GO:0048478	replication fork protection	-	ISO	Process
GO:0070530	K63-linked polyubiquitin modification-dependent protein binding	-	ISO	Function