EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000036167 (Gene tree)
Gene ID: 223828
Gene Symbol: Pphln1
Alias: 1110063K05Rik|1600022A19Rik|CR
Full Name: periphilin 1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 93161
Position: chr15: 93398350-93491510
Accession: 1917029
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000109256	-	1154	XM_006520856	ENSMUSP00000104879	293 (aa)	-	G3UWD4
ENSMUST00000165935	-	3473	-	ENSMUSP00000131121	293 (aa)	-	G3UWD4
ENSMUST00000229721	-	583	-	-	- (aa)	-	-
ENSMUST00000230385	-	592	-	ENSMUSP00000155236	125 (aa)	-	A0A2R8W6Q1
ENSMUST00000068457	-	3351	XM_006520857	ENSMUSP00000068165	312 (aa)	XP_006520920	Q3UBL8
ENSMUST00000049122	-	3573	XM_006520850	ENSMUSP00000042762	381 (aa)	XP_006520913	G3X959
ENSMUST00000229071	-	1198	-	ENSMUSP00000154876	293 (aa)	-	G3UWD4

Gene Model

Click here to download ENSMUSG00000036167's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000036167's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000036167	Pphln1	100	83.974	ENSG00000134283	PPHLN1	98	83.974	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005634	nucleus	-	IEA	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005694	chromosome	-	IEA	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0005794	Golgi apparatus	-	ISO	Component
GO:0005829	cytosol	-	ISO	Component
GO:0031424	keratinization	-	IEA	Process
GO:0045814	negative regulation of gene expression, epigenetic	-	ISO	Process
GO:0045892	negative regulation of transcription, DNA-templated	-	IEA	Process
GO:0090309	positive regulation of methylation-dependent chromatin silencing	-	ISO	Process
GO:0097355	protein localization to heterochromatin	-	ISO	Process