EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000036323 (Gene tree)
Gene ID: 66661
Gene Symbol: Srp72
Alias: 5730576P14Rik|72kDa
Full Name: signal recognition particle 72
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 25255 bases
Position: chr5:76974683-76999937
Accession: 1333795
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000113312	SRP72	PF08492.12	8.6e-22	1	1
ENSMUSP00000098648	SRP72	PF08492.12	9.7e-22	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000120550	-	2297	-	ENSMUSP00000113312	610 (aa)	-	E9Q740
ENSMUST00000150661	-	660	-	-	- (aa)	-	-
ENSMUST00000144741	-	410	-	-	- (aa)	-	-
ENSMUST00000141873	-	1220	-	-	- (aa)	-	-
ENSMUST00000148423	-	528	-	-	- (aa)	-	-
ENSMUST00000132860	-	2355	-	-	- (aa)	-	-
ENSMUST00000125732	-	417	-	-	- (aa)	-	-
ENSMUST00000146167	-	764	-	-	- (aa)	-	-
ENSMUST00000101087	-	3625	-	ENSMUSP00000098648	671 (aa)	-	F8VQC1

Gene Model

Click here to download ENSMUSG00000036323's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03060	Protein export	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000036323's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000036323	Srp72	100	96.393	ENSG00000174780	SRP72	100	96.393	Homo_sapiens
ENSMUSG00000036323	Srp72	99	75.658	ENSAPOG00000019438	srp72	99	75.658	Acanthochromis_polyacanthus
ENSMUSG00000036323	Srp72	98	96.183	ENSAMEG00000008469	SRP72	99	96.125	Ailuropoda_melanoleuca
ENSMUSG00000036323	Srp72	99	75.970	ENSACIG00000000488	srp72	99	75.970	Amphilophus_citrinellus
ENSMUSG00000036323	Srp72	100	76.006	ENSAOCG00000011256	srp72	100	76.006	Amphiprion_ocellaris
ENSMUSG00000036323	Srp72	100	76.006	ENSAPEG00000001512	srp72	100	76.006	Amphiprion_percula
ENSMUSG00000036323	Srp72	99	72.368	ENSATEG00000006781	srp72	99	77.488	Anabas_testudineus
ENSMUSG00000036323	Srp72	98	83.939	ENSAPLG00000008751	SRP72	98	83.636	Anas_platyrhynchos
ENSMUSG00000036323	Srp72	96	84.544	ENSACAG00000002381	SRP72	99	84.203	Anolis_carolinensis
ENSMUSG00000036323	Srp72	97	95.960	ENSANAG00000020836	-	100	95.902	Aotus_nancymaae
ENSMUSG00000036323	Srp72	99	76.647	ENSACLG00000014617	srp72	99	76.647	Astatotilapia_calliptera
ENSMUSG00000036323	Srp72	99	76.383	ENSAMXG00000004011	srp72	99	76.233	Astyanax_mexicanus
ENSMUSG00000036323	Srp72	98	96.183	ENSBTAG00000010593	SRP72	100	96.125	Bos_taurus
ENSMUSG00000036323	Srp72	98	95.420	ENSCJAG00000017998	SRP72	100	95.410	Callithrix_jacchus
ENSMUSG00000036323	Srp72	100	96.572	ENSCAFG00000002244	SRP72	100	96.572	Canis_familiaris
ENSMUSG00000036323	Srp72	100	96.721	ENSCAFG00020027338	SRP72	100	96.721	Canis_lupus_dingo
ENSMUSG00000036323	Srp72	98	93.912	ENSCHIG00000021465	SRP72	100	93.908	Capra_hircus
ENSMUSG00000036323	Srp72	99	96.059	ENSTSYG00000010571	-	99	96.059	Carlito_syrichta
ENSMUSG00000036323	Srp72	83	84.676	ENSCAPG00000016668	SRP72	100	82.879	Cavia_aperea
ENSMUSG00000036323	Srp72	98	96.031	ENSCPOG00000000218	SRP72	100	96.066	Cavia_porcellus
ENSMUSG00000036323	Srp72	98	93.588	ENSCCAG00000030830	-	100	93.592	Cebus_capucinus
ENSMUSG00000036323	Srp72	95	95.604	ENSCCAG00000030683	-	94	95.866	Cebus_capucinus
ENSMUSG00000036323	Srp72	97	76.074	ENSCATG00000045359	-	95	75.963	Cercocebus_atys
ENSMUSG00000036323	Srp72	98	96.183	ENSCATG00000008072	SRP72	100	96.230	Cercocebus_atys
ENSMUSG00000036323	Srp72	98	96.183	ENSCLAG00000003571	SRP72	100	96.230	Chinchilla_lanigera
ENSMUSG00000036323	Srp72	98	90.229	ENSCSAG00000005079	SRP72	100	90.313	Chlorocebus_sabaeus
ENSMUSG00000036323	Srp72	90	97.458	ENSCHOG00000013240	SRP72	90	97.458	Choloepus_hoffmanni
ENSMUSG00000036323	Srp72	96	85.537	ENSCPBG00000015015	SRP72	100	84.821	Chrysemys_picta_bellii
ENSMUSG00000036323	Srp72	94	41.489	ENSCING00000002417	-	98	41.667	Ciona_intestinalis
ENSMUSG00000036323	Srp72	94	41.437	ENSCSAVG00000011288	-	99	40.929	Ciona_savignyi
ENSMUSG00000036323	Srp72	98	96.183	ENSCANG00000041709	SRP72	100	96.230	Colobus_angolensis_palliatus
ENSMUSG00000036323	Srp72	90	78.423	ENSCANG00000037920	-	98	78.814	Colobus_angolensis_palliatus
ENSMUSG00000036323	Srp72	100	98.525	ENSCGRG00001013548	Srp72	100	98.525	Cricetulus_griseus_chok1gshd
ENSMUSG00000036323	Srp72	94	98.604	ENSCGRG00000003013	Srp72	99	98.604	Cricetulus_griseus_crigri
ENSMUSG00000036323	Srp72	99	76.647	ENSCSEG00000003616	srp72	99	76.497	Cynoglossus_semilaevis
ENSMUSG00000036323	Srp72	91	77.340	ENSCVAG00000001520	srp72	99	77.340	Cyprinodon_variegatus
ENSMUSG00000036323	Srp72	85	76.491	ENSDARG00000014139	srp72	99	75.758	Danio_rerio
ENSMUSG00000036323	Srp72	100	90.639	ENSDNOG00000039012	SRP72	83	90.936	Dasypus_novemcinctus
ENSMUSG00000036323	Srp72	96	95.039	ENSDORG00000000171	Srp72	99	94.627	Dipodomys_ordii
ENSMUSG00000036323	Srp72	92	40.705	FBgn0038810	Srp72	94	40.705	Drosophila_melanogaster
ENSMUSG00000036323	Srp72	96	94.876	ENSETEG00000005191	SRP72	100	94.792	Echinops_telfairi
ENSMUSG00000036323	Srp72	73	61.382	ENSEBUG00000003696	srp72	96	61.633	Eptatretus_burgeri
ENSMUSG00000036323	Srp72	98	96.031	ENSEASG00005017747	SRP72	100	95.976	Equus_asinus_asinus
ENSMUSG00000036323	Srp72	98	95.878	ENSECAG00000006920	SRP72	100	95.827	Equus_caballus
ENSMUSG00000036323	Srp72	99	75.744	ENSELUG00000022415	srp72	100	75.495	Esox_lucius
ENSMUSG00000036323	Srp72	96	96.246	ENSFCAG00000027600	SRP72	100	95.908	Felis_catus
ENSMUSG00000036323	Srp72	96	85.559	ENSFALG00000006713	SRP72	99	84.328	Ficedula_albicollis
ENSMUSG00000036323	Srp72	98	95.115	ENSFDAG00000002014	-	100	95.082	Fukomys_damarensis
ENSMUSG00000036323	Srp72	97	65.261	ENSFDAG00000009793	-	95	63.744	Fukomys_damarensis
ENSMUSG00000036323	Srp72	99	75.298	ENSFHEG00000017652	srp72	93	76.042	Fundulus_heteroclitus
ENSMUSG00000036323	Srp72	97	73.344	ENSGMOG00000005986	srp72	99	73.244	Gadus_morhua
ENSMUSG00000036323	Srp72	96	86.293	ENSGALG00000011403	SRP72	100	85.119	Gallus_gallus
ENSMUSG00000036323	Srp72	99	75.934	ENSGAFG00000017762	srp72	99	76.084	Gambusia_affinis
ENSMUSG00000036323	Srp72	99	74.554	ENSGACG00000016749	srp72	99	75.298	Gasterosteus_aculeatus
ENSMUSG00000036323	Srp72	87	84.708	ENSGAGG00000024611	SRP72	99	85.546	Gopherus_agassizii
ENSMUSG00000036323	Srp72	98	96.031	ENSGGOG00000013234	-	100	96.066	Gorilla_gorilla
ENSMUSG00000036323	Srp72	99	76.796	ENSHBUG00000020723	srp72	99	76.796	Haplochromis_burtoni
ENSMUSG00000036323	Srp72	97	72.366	ENSHGLG00000018597	-	100	73.065	Heterocephalus_glaber_female
ENSMUSG00000036323	Srp72	56	75.588	ENSHGLG00000003496	-	97	75.588	Heterocephalus_glaber_female
ENSMUSG00000036323	Srp72	98	89.924	ENSHGLG00000005029	-	98	89.466	Heterocephalus_glaber_female
ENSMUSG00000036323	Srp72	86	93.450	ENSHGLG00000003950	-	100	93.450	Heterocephalus_glaber_female
ENSMUSG00000036323	Srp72	98	95.573	ENSHGLG00000009791	SRP72	100	95.529	Heterocephalus_glaber_female
ENSMUSG00000036323	Srp72	98	78.798	ENSHGLG00000010633	-	98	86.828	Heterocephalus_glaber_female
ENSMUSG00000036323	Srp72	100	78.339	ENSHGLG00100009346	-	100	78.049	Heterocephalus_glaber_male
ENSMUSG00000036323	Srp72	98	89.924	ENSHGLG00100011236	-	98	89.466	Heterocephalus_glaber_male
ENSMUSG00000036323	Srp72	98	95.573	ENSHGLG00100009021	SRP72	100	95.529	Heterocephalus_glaber_male
ENSMUSG00000036323	Srp72	86	93.013	ENSHGLG00100017133	-	100	93.013	Heterocephalus_glaber_male
ENSMUSG00000036323	Srp72	99	76.462	ENSHCOG00000013760	srp72	99	76.162	Hippocampus_comes
ENSMUSG00000036323	Srp72	99	76.162	ENSIPUG00000000210	srp72	99	76.162	Ictalurus_punctatus
ENSMUSG00000036323	Srp72	100	96.721	ENSSTOG00000007305	SRP72	100	96.721	Ictidomys_tridecemlineatus
ENSMUSG00000036323	Srp72	96	95.334	ENSJJAG00000018324	Srp72	100	94.799	Jaculus_jaculus
ENSMUSG00000036323	Srp72	99	75.037	ENSKMAG00000003776	srp72	99	75.150	Kryptolebias_marmoratus
ENSMUSG00000036323	Srp72	97	78.374	ENSLOCG00000002628	srp72	97	78.034	Lepisosteus_oculatus
ENSMUSG00000036323	Srp72	98	95.573	ENSLAFG00000018307	SRP72	100	95.529	Loxodonta_africana
ENSMUSG00000036323	Srp72	98	77.017	ENSMFAG00000037164	-	97	77.589	Macaca_fascicularis
ENSMUSG00000036323	Srp72	98	96.031	ENSMFAG00000031065	SRP72	100	96.066	Macaca_fascicularis
ENSMUSG00000036323	Srp72	98	96.055	ENSMMUG00000016368	SRP72	100	96.066	Macaca_mulatta
ENSMUSG00000036323	Srp72	94	68.631	ENSMMUG00000021262	-	95	69.920	Macaca_mulatta
ENSMUSG00000036323	Srp72	98	96.031	ENSMNEG00000038065	-	100	96.066	Macaca_nemestrina
ENSMUSG00000036323	Srp72	95	94.819	ENSMLEG00000030140	-	95	94.819	Mandrillus_leucophaeus
ENSMUSG00000036323	Srp72	99	76.006	ENSMAMG00000014989	srp72	89	76.006	Mastacembelus_armatus
ENSMUSG00000036323	Srp72	99	78.338	ENSMZEG00005003325	srp72	99	76.796	Maylandia_zebra
ENSMUSG00000036323	Srp72	95	82.362	ENSMGAG00000008567	SRP72	100	85.256	Meleagris_gallopavo
ENSMUSG00000036323	Srp72	100	98.200	ENSMAUG00000001237	Srp72	100	98.200	Mesocricetus_auratus
ENSMUSG00000036323	Srp72	95	94.976	ENSMICG00000008507	-	94	95.231	Microcebus_murinus
ENSMUSG00000036323	Srp72	100	98.525	ENSMOCG00000020309	Srp72	100	98.525	Microtus_ochrogaster
ENSMUSG00000036323	Srp72	99	74.401	ENSMMOG00000002627	srp72	99	74.850	Mola_mola
ENSMUSG00000036323	Srp72	96	84.579	ENSMODG00000020697	SRP72	100	84.650	Monodelphis_domestica
ENSMUSG00000036323	Srp72	99	76.048	ENSMALG00000003747	srp72	100	76.364	Monopterus_albus
ENSMUSG00000036323	Srp72	100	100.000	MGP_CAROLIEiJ_G0027323	Srp72	100	100.000	Mus_caroli
ENSMUSG00000036323	Srp72	100	98.663	MGP_PahariEiJ_G0017103	Srp72	100	98.663	Mus_pahari
ENSMUSG00000036323	Srp72	100	100.000	MGP_SPRETEiJ_G0028317	Srp72	100	100.000	Mus_spretus
ENSMUSG00000036323	Srp72	96	96.112	ENSMPUG00000004828	SRP72	100	95.678	Mustela_putorius_furo
ENSMUSG00000036323	Srp72	96	95.349	ENSMLUG00000007344	SRP72	99	94.933	Myotis_lucifugus
ENSMUSG00000036323	Srp72	100	96.125	ENSNGAG00000012595	Srp72	100	96.125	Nannospalax_galili
ENSMUSG00000036323	Srp72	99	73.503	ENSNBRG00000014492	srp72	99	73.503	Neolamprologus_brichardi
ENSMUSG00000036323	Srp72	100	90.015	ENSNLEG00000008806	-	100	90.015	Nomascus_leucogenys
ENSMUSG00000036323	Srp72	98	77.204	ENSMEUG00000005164	SRP72	90	89.091	Notamacropus_eugenii
ENSMUSG00000036323	Srp72	96	94.081	ENSOPRG00000012521	SRP72	100	93.890	Ochotona_princeps
ENSMUSG00000036323	Srp72	98	93.140	ENSODEG00000012214	SRP72	100	93.155	Octodon_degus
ENSMUSG00000036323	Srp72	99	76.602	ENSONIG00000001446	srp72	99	76.602	Oreochromis_niloticus
ENSMUSG00000036323	Srp72	96	69.725	ENSOANG00000008562	SRP72	97	69.440	Ornithorhynchus_anatinus
ENSMUSG00000036323	Srp72	97	95.566	ENSOCUG00000012226	SRP72	100	95.380	Oryctolagus_cuniculus
ENSMUSG00000036323	Srp72	99	75.262	ENSORLG00000020418	srp72	99	74.663	Oryzias_latipes
ENSMUSG00000036323	Srp72	99	74.963	ENSORLG00020009138	srp72	98	73.613	Oryzias_latipes_hni
ENSMUSG00000036323	Srp72	99	74.813	ENSORLG00015018251	srp72	99	74.213	Oryzias_latipes_hsok
ENSMUSG00000036323	Srp72	99	74.213	ENSOMEG00000022008	srp72	99	74.663	Oryzias_melastigma
ENSMUSG00000036323	Srp72	98	95.878	ENSOGAG00000003578	SRP72	100	95.827	Otolemur_garnettii
ENSMUSG00000036323	Srp72	98	96.183	ENSOARG00000004329	SRP72	100	96.125	Ovis_aries
ENSMUSG00000036323	Srp72	98	96.336	ENSPPAG00000042265	SRP72	100	96.274	Pan_paniscus
ENSMUSG00000036323	Srp72	80	75.560	ENSPPAG00000032490	-	91	74.630	Pan_paniscus
ENSMUSG00000036323	Srp72	99	68.731	ENSPPAG00000011428	-	95	69.725	Pan_paniscus
ENSMUSG00000036323	Srp72	100	96.066	ENSPPRG00000015991	SRP72	100	96.066	Panthera_pardus
ENSMUSG00000036323	Srp72	100	96.066	ENSPTIG00000018786	SRP72	100	96.066	Panthera_tigris_altaica
ENSMUSG00000036323	Srp72	100	96.393	ENSPTRG00000048466	-	100	96.393	Pan_troglodytes
ENSMUSG00000036323	Srp72	80	75.373	ENSPTRG00000043609	-	91	74.354	Pan_troglodytes
ENSMUSG00000036323	Srp72	99	70.739	ENSPTRG00000048100	-	95	71.756	Pan_troglodytes
ENSMUSG00000036323	Srp72	98	96.183	ENSPANG00000005495	SRP72	100	96.230	Papio_anubis
ENSMUSG00000036323	Srp72	94	75.276	ENSPANG00000030230	-	97	75.917	Papio_anubis
ENSMUSG00000036323	Srp72	93	85.623	ENSPSIG00000003003	SRP72	100	85.514	Pelodiscus_sinensis
ENSMUSG00000036323	Srp72	100	97.626	ENSPEMG00000012828	-	100	97.626	Peromyscus_maniculatus_bairdii
ENSMUSG00000036323	Srp72	96	88.700	ENSPCIG00000000732	SRP72	99	88.358	Phascolarctos_cinereus
ENSMUSG00000036323	Srp72	99	75.785	ENSPFOG00000003480	srp72	99	76.198	Poecilia_formosa
ENSMUSG00000036323	Srp72	99	75.934	ENSPLAG00000020122	srp72	99	76.198	Poecilia_latipinna
ENSMUSG00000036323	Srp72	99	75.486	ENSPMEG00000019988	srp72	99	75.785	Poecilia_mexicana
ENSMUSG00000036323	Srp72	100	75.000	ENSPREG00000006218	srp72	100	75.163	Poecilia_reticulata
ENSMUSG00000036323	Srp72	100	96.274	ENSPPYG00000014752	-	78	96.274	Pongo_abelii
ENSMUSG00000036323	Srp72	62	79.581	ENSPPYG00000009152	-	95	78.272	Pongo_abelii
ENSMUSG00000036323	Srp72	98	94.504	ENSPVAG00000005590	SRP72	100	94.486	Pteropus_vampyrus
ENSMUSG00000036323	Srp72	99	77.096	ENSPNYG00000001916	srp72	99	77.096	Pundamilia_nyererei
ENSMUSG00000036323	Srp72	99	76.532	ENSPNAG00000022424	srp72	99	76.383	Pygocentrus_nattereri
ENSMUSG00000036323	Srp72	100	96.721	ENSRNOG00000002100	LOC108348180	100	96.721	Rattus_norvegicus
ENSMUSG00000036323	Srp72	99	73.795	ENSRBIG00000029328	-	98	73.666	Rhinopithecus_bieti
ENSMUSG00000036323	Srp72	98	89.771	ENSRBIG00000042069	SRP72	100	90.164	Rhinopithecus_bieti
ENSMUSG00000036323	Srp72	98	96.183	ENSRROG00000035704	SRP72	100	96.230	Rhinopithecus_roxellana
ENSMUSG00000036323	Srp72	95	86.970	ENSSHAG00000000614	SRP72	100	85.312	Sarcophilus_harrisii
ENSMUSG00000036323	Srp72	99	77.961	ENSSFOG00015002026	srp72	97	77.573	Scleropages_formosus
ENSMUSG00000036323	Srp72	99	74.218	ENSSMAG00000007639	srp72	99	74.814	Scophthalmus_maximus
ENSMUSG00000036323	Srp72	99	76.119	ENSSDUG00000007345	srp72	99	76.866	Seriola_dumerili
ENSMUSG00000036323	Srp72	99	76.155	ENSSLDG00000021819	srp72	99	76.762	Seriola_lalandi_dorsalis
ENSMUSG00000036323	Srp72	82	90.526	ENSSARG00000005804	SRP72	77	90.657	Sorex_araneus
ENSMUSG00000036323	Srp72	96	85.358	ENSSPUG00000009740	SRP72	99	84.627	Sphenodon_punctatus
ENSMUSG00000036323	Srp72	99	75.749	ENSSPAG00000011565	srp72	99	76.497	Stegastes_partitus
ENSMUSG00000036323	Srp72	99	93.363	ENSSSCG00000008900	SRP72	100	93.155	Sus_scrofa
ENSMUSG00000036323	Srp72	96	85.559	ENSTGUG00000004767	SRP72	99	84.054	Taeniopygia_guttata
ENSMUSG00000036323	Srp72	99	75.112	ENSTRUG00000009831	srp72	99	74.813	Takifugu_rubripes
ENSMUSG00000036323	Srp72	99	76.304	ENSTNIG00000013073	srp72	99	76.304	Tetraodon_nigroviridis
ENSMUSG00000036323	Srp72	87	90.625	ENSTBEG00000007394	SRP72	90	83.898	Tupaia_belangeri
ENSMUSG00000036323	Srp72	92	95.631	ENSTTRG00000010945	SRP72	100	95.584	Tursiops_truncatus
ENSMUSG00000036323	Srp72	63	95.052	ENSUAMG00000001701	SRP72	100	95.526	Ursus_americanus
ENSMUSG00000036323	Srp72	100	96.274	ENSUMAG00000008151	SRP72	100	96.274	Ursus_maritimus
ENSMUSG00000036323	Srp72	98	94.351	ENSVPAG00000000458	SRP72	100	94.337	Vicugna_pacos
ENSMUSG00000036323	Srp72	100	96.423	ENSVVUG00000006020	SRP72	100	96.423	Vulpes_vulpes
ENSMUSG00000036323	Srp72	95	78.493	ENSXETG00000010205	srp72	100	78.493	Xenopus_tropicalis
ENSMUSG00000036323	Srp72	99	75.635	ENSXMAG00000018000	srp72	99	75.744	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005047	signal recognition particle binding	-	ISO	Function
GO:0005730	nucleolus	-	ISO	Component
GO:0005783	endoplasmic reticulum	-	ISO	Component
GO:0005786	signal recognition particle, endoplasmic reticulum targeting	21873635.	IBA	Component
GO:0005786	signal recognition particle, endoplasmic reticulum targeting	9857079.	ISA	Component
GO:0005786	signal recognition particle, endoplasmic reticulum targeting	-	ISO	Component
GO:0006614	SRP-dependent cotranslational protein targeting to membrane	9857079.	ISA	Process
GO:0006616	SRP-dependent cotranslational protein targeting to membrane, translocation	21873635.	IBA	Process
GO:0008312	7S RNA binding	-	ISO	Function
GO:0030911	TPR domain binding	-	ISO	Function
GO:0042493	response to drug	-	ISO	Process
GO:0043022	ribosome binding	-	ISO	Function
GO:0048500	signal recognition particle	-	ISO	Component