EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000036860 (Gene tree)
Gene ID: 67212
Gene Symbol: Mrpl55
Alias: 2810038N09Rik
Full Name: mitochondrial ribosomal protein L55
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 3649 bases
Position: chr11:59202486-59206134
Accession: 1914462
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000048814	Mitoc_L55	PF09776.9	2.4e-58	1	1
ENSMUSP00000104413	Mitoc_L55	PF09776.9	2.4e-58	1	1
ENSMUSP00000104412	Mitoc_L55	PF09776.9	2.9e-58	1	1
ENSMUSP00000104414	Mitoc_L55	PF09776.9	2.9e-58	1	1
ENSMUSP00000104415	Mitoc_L55	PF09776.9	2.9e-58	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000108785	-	792	-	ENSMUSP00000104413	127 (aa)	-	Q9CZ83
ENSMUST00000108787	-	718	-	ENSMUSP00000104415	134 (aa)	-	Q9CZ83
ENSMUST00000108786	-	757	XM_006533972	ENSMUSP00000104414	134 (aa)	XP_006534035	Q9CZ83
ENSMUST00000045697	-	940	XM_006533978	ENSMUSP00000048814	127 (aa)	XP_006534041	Q9CZ83
ENSMUST00000108784	-	729	XM_006533974	ENSMUSP00000104412	134 (aa)	XP_006534037	Q9CZ83

Gene Model

Click here to download ENSMUSG00000036860's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000036860's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000036860	Mrpl55	98	72.800	ENSG00000162910	MRPL55	100	72.368	Homo_sapiens
ENSMUSG00000036860	Mrpl55	94	72.269	ENSAMEG00000016292	MRPL55	99	69.600	Ailuropoda_melanoleuca
ENSMUSG00000036860	Mrpl55	98	72.000	ENSANAG00000036592	MRPL55	100	70.312	Aotus_nancymaae
ENSMUSG00000036860	Mrpl55	94	73.333	ENSBTAG00000020721	MRPL55	92	69.231	Bos_taurus
ENSMUSG00000036860	Mrpl55	98	71.200	ENSCJAG00000016730	MRPL55	100	69.531	Callithrix_jacchus
ENSMUSG00000036860	Mrpl55	94	73.109	ENSCAFG00000001176	MRPL55	99	70.400	Canis_familiaris
ENSMUSG00000036860	Mrpl55	94	73.109	ENSCAFG00020005742	MRPL55	99	70.400	Canis_lupus_dingo
ENSMUSG00000036860	Mrpl55	94	71.667	ENSCHIG00000024153	MRPL55	99	69.841	Capra_hircus
ENSMUSG00000036860	Mrpl55	98	72.000	ENSTSYG00000002932	MRPL55	98	72.000	Carlito_syrichta
ENSMUSG00000036860	Mrpl55	98	73.387	ENSCAPG00000005899	MRPL55	100	73.810	Cavia_aperea
ENSMUSG00000036860	Mrpl55	96	75.410	ENSCPOG00000014241	MRPL55	100	71.875	Cavia_porcellus
ENSMUSG00000036860	Mrpl55	98	71.200	ENSCCAG00000031724	MRPL55	100	69.531	Cebus_capucinus
ENSMUSG00000036860	Mrpl55	98	72.000	ENSCATG00000001114	MRPL55	100	70.312	Cercocebus_atys
ENSMUSG00000036860	Mrpl55	98	75.200	ENSCLAG00000000917	MRPL55	100	73.438	Chinchilla_lanigera
ENSMUSG00000036860	Mrpl55	98	72.000	ENSCSAG00000016477	MRPL55	100	70.312	Chlorocebus_sabaeus
ENSMUSG00000036860	Mrpl55	98	72.000	ENSCANG00000034934	MRPL55	100	70.312	Colobus_angolensis_palliatus
ENSMUSG00000036860	Mrpl55	100	86.614	ENSCGRG00001020506	Mrpl55	100	86.614	Cricetulus_griseus_chok1gshd
ENSMUSG00000036860	Mrpl55	100	85.039	ENSCGRG00000002872	Mrpl55	100	85.039	Cricetulus_griseus_crigri
ENSMUSG00000036860	Mrpl55	96	63.115	ENSDNOG00000024342	MRPL55	99	61.600	Dasypus_novemcinctus
ENSMUSG00000036860	Mrpl55	94	79.832	ENSEASG00005017538	MRPL55	99	76.000	Equus_asinus_asinus
ENSMUSG00000036860	Mrpl55	94	79.832	ENSECAG00000019642	MRPL55	99	76.000	Equus_caballus
ENSMUSG00000036860	Mrpl55	96	72.131	ENSFCAG00000015199	MRPL55	97	72.131	Felis_catus
ENSMUSG00000036860	Mrpl55	96	72.951	ENSFDAG00000006749	MRPL55	100	69.291	Fukomys_damarensis
ENSMUSG00000036860	Mrpl55	98	71.200	ENSGGOG00000015709	MRPL55	100	69.531	Gorilla_gorilla
ENSMUSG00000036860	Mrpl55	96	73.770	ENSHGLG00000000165	MRPL55	100	70.312	Heterocephalus_glaber_female
ENSMUSG00000036860	Mrpl55	96	73.770	ENSHGLG00100007233	MRPL55	100	70.312	Heterocephalus_glaber_male
ENSMUSG00000036860	Mrpl55	96	73.770	ENSHGLG00100018781	MRPL55	100	70.312	Heterocephalus_glaber_male
ENSMUSG00000036860	Mrpl55	100	80.315	ENSJJAG00000021164	Mrpl55	100	80.315	Jaculus_jaculus
ENSMUSG00000036860	Mrpl55	99	70.079	ENSLAFG00000003008	-	100	70.079	Loxodonta_africana
ENSMUSG00000036860	Mrpl55	98	71.200	ENSMFAG00000003524	MRPL55	100	69.531	Macaca_fascicularis
ENSMUSG00000036860	Mrpl55	94	72.269	ENSMMUG00000002790	MRPL55	100	65.455	Macaca_mulatta
ENSMUSG00000036860	Mrpl55	98	71.200	ENSMNEG00000036387	MRPL55	100	69.531	Macaca_nemestrina
ENSMUSG00000036860	Mrpl55	98	72.000	ENSMLEG00000043407	MRPL55	100	70.312	Mandrillus_leucophaeus
ENSMUSG00000036860	Mrpl55	100	86.614	ENSMAUG00000000347	Mrpl55	100	86.614	Mesocricetus_auratus
ENSMUSG00000036860	Mrpl55	98	76.000	ENSMICG00000031760	MRPL55	98	76.000	Microcebus_murinus
ENSMUSG00000036860	Mrpl55	100	86.614	ENSMOCG00000022355	Mrpl55	100	86.614	Microtus_ochrogaster
ENSMUSG00000036860	Mrpl55	70	64.045	ENSMODG00000013793	-	95	57.798	Monodelphis_domestica
ENSMUSG00000036860	Mrpl55	100	97.761	MGP_CAROLIEiJ_G0016428	Mrpl55	100	97.761	Mus_caroli
ENSMUSG00000036860	Mrpl55	100	94.488	MGP_PahariEiJ_G0017559	Mrpl55	100	94.488	Mus_pahari
ENSMUSG00000036860	Mrpl55	100	98.507	MGP_SPRETEiJ_G0017265	Mrpl55	100	98.507	Mus_spretus
ENSMUSG00000036860	Mrpl55	94	74.167	ENSMPUG00000001004	MRPL55	94	74.167	Mustela_putorius_furo
ENSMUSG00000036860	Mrpl55	96	73.770	ENSMLUG00000007037	MRPL55	99	72.000	Myotis_lucifugus
ENSMUSG00000036860	Mrpl55	100	76.562	ENSNGAG00000023889	Mrpl55	100	76.562	Nannospalax_galili
ENSMUSG00000036860	Mrpl55	98	72.000	ENSNLEG00000014215	MRPL55	100	70.312	Nomascus_leucogenys
ENSMUSG00000036860	Mrpl55	91	68.966	ENSOPRG00000015086	-	84	66.129	Ochotona_princeps
ENSMUSG00000036860	Mrpl55	94	74.790	ENSODEG00000001067	MRPL55	100	74.790	Octodon_degus
ENSMUSG00000036860	Mrpl55	93	72.881	ENSOCUG00000015380	-	97	69.600	Oryctolagus_cuniculus
ENSMUSG00000036860	Mrpl55	94	57.983	ENSOCUG00000027013	-	99	55.200	Oryctolagus_cuniculus
ENSMUSG00000036860	Mrpl55	95	75.207	ENSOGAG00000010981	MRPL55	100	73.228	Otolemur_garnettii
ENSMUSG00000036860	Mrpl55	94	73.333	ENSOARG00000006369	MRPL55	99	71.429	Ovis_aries
ENSMUSG00000036860	Mrpl55	98	72.000	ENSPPAG00000030545	MRPL55	100	70.312	Pan_paniscus
ENSMUSG00000036860	Mrpl55	96	72.951	ENSPPRG00000004595	MRPL55	97	72.951	Panthera_pardus
ENSMUSG00000036860	Mrpl55	96	72.951	ENSPTIG00000008780	MRPL55	93	70.400	Panthera_tigris_altaica
ENSMUSG00000036860	Mrpl55	98	71.200	ENSPTRG00000002068	MRPL55	100	69.531	Pan_troglodytes
ENSMUSG00000036860	Mrpl55	98	71.200	ENSPANG00000017717	MRPL55	100	69.531	Papio_anubis
ENSMUSG00000036860	Mrpl55	100	87.402	ENSPEMG00000010381	Mrpl55	100	87.402	Peromyscus_maniculatus_bairdii
ENSMUSG00000036860	Mrpl55	98	72.800	ENSPPYG00000000146	-	100	71.094	Pongo_abelii
ENSMUSG00000036860	Mrpl55	84	76.636	ENSPCAG00000010591	MRPL55	66	76.636	Procavia_capensis
ENSMUSG00000036860	Mrpl55	98	73.600	ENSPCOG00000013827	MRPL55	100	72.656	Propithecus_coquereli
ENSMUSG00000036860	Mrpl55	100	93.701	ENSRNOG00000002943	Mrpl55	100	93.701	Rattus_norvegicus
ENSMUSG00000036860	Mrpl55	98	72.000	ENSRBIG00000038180	MRPL55	100	70.312	Rhinopithecus_bieti
ENSMUSG00000036860	Mrpl55	98	72.000	ENSRROG00000033833	MRPL55	100	70.312	Rhinopithecus_roxellana
ENSMUSG00000036860	Mrpl55	98	70.400	ENSSBOG00000035388	MRPL55	100	68.750	Saimiri_boliviensis_boliviensis
ENSMUSG00000036860	Mrpl55	96	54.918	ENSSHAG00000014746	-	100	52.756	Sarcophilus_harrisii
ENSMUSG00000036860	Mrpl55	94	72.500	ENSSSCG00000029050	MRPL55	99	69.841	Sus_scrofa
ENSMUSG00000036860	Mrpl55	73	50.538	ENSUAMG00000022827	-	60	50.538	Ursus_americanus
ENSMUSG00000036860	Mrpl55	96	72.951	ENSUAMG00000016465	-	97	72.951	Ursus_americanus
ENSMUSG00000036860	Mrpl55	96	72.131	ENSUMAG00000000905	MRPL55	97	72.131	Ursus_maritimus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003735	structural constituent of ribosome	21873635.	IBA	Function
GO:0005739	mitochondrion	18614015.	HDA	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0005762	mitochondrial large ribosomal subunit	21873635.	IBA	Component
GO:0005762	mitochondrial large ribosomal subunit	-	ISO	Component
GO:0005840	ribosome	-	IEA	Component
GO:0006412	translation	21873635.	IBA	Process