EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Gene Ontology

Description

Ensembl ID: ENSMUSG00000036980 (Gene tree)
Gene ID: 21343
Gene Symbol: Taf6
Alias: 80kDa|Taf2e|p80
Full Name: TATA-box binding protein associated factor 6
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 8835
Position: chr5: 138178617-138187451
Accession: 109129
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000153117	-	2619	-	ENSMUSP00000138335	114 (aa)	-	S4R1R2
ENSMUST00000048698	-	2304	XM_011240936	ENSMUSP00000048016	678 (aa)	XP_011239238	Q62311
ENSMUST00000130473	-	1220	-	-	- (aa)	-	-
ENSMUST00000200483	-	1139	-	-	- (aa)	-	-
ENSMUST00000139276	-	357	-	ENSMUSP00000116512	55 (aa)	-	D3Z4X5
ENSMUST00000110937	-	2093	-	ENSMUSP00000106562	636 (aa)	-	D3Z0T0
ENSMUST00000110936	-	2308	XM_011240940	ENSMUSP00000106561	678 (aa)	XP_011239242	Q62311
ENSMUST00000123415	-	968	-	ENSMUSP00000122534	214 (aa)	-	D3Z5H6

Gene Model

Click here to download ENSMUSG00000036980's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03022	Basal transcription factors	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000036980's network

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000124	SAGA complex	-	IEA	Component
GO:0003677	DNA binding	18722179.	IDA	Function
GO:0003677	DNA binding	-	ISO	Function
GO:0003700	DNA-binding transcription factor activity	-	ISO	Function
GO:0003700	DNA-binding transcription factor activity	-	ISO	Function
GO:0005515	protein binding	12665565.	IPI	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	12665565.17242199.18722179.22323595.	IDA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005669	transcription factor TFIID complex	21873635.	IBA	Component
GO:0005669	transcription factor TFIID complex	14580349.	ISO	Component
GO:0005829	cytosol	-	ISO	Component
GO:0006325	chromatin organization	21873635.	IBA	Process
GO:0006352	DNA-templated transcription, initiation	-	ISO	Process
GO:0006357	regulation of transcription by RNA polymerase II	-	IEA	Process
GO:0006366	transcription by RNA polymerase II	21873635.	IBA	Process
GO:0006367	transcription initiation from RNA polymerase II promoter	-	ISO	Process
GO:0008285	negative regulation of cell proliferation	-	ISO	Process
GO:0017162	aryl hydrocarbon receptor binding	-	ISO	Function
GO:0032991	protein-containing complex	-	ISO	Component
GO:0033276	transcription factor TFTC complex	-	ISO	Component
GO:0043065	positive regulation of apoptotic process	-	ISO	Process
GO:0045786	negative regulation of cell cycle	-	ISO	Process
GO:0046695	SLIK (SAGA-like) complex	-	IEA	Component
GO:0046982	protein heterodimerization activity	-	IEA	Function
GO:0051123	RNA polymerase II preinitiation complex assembly	21873635.	IBA	Process
GO:0060261	positive regulation of transcription initiation from RNA polymerase II promoter	-	ISO	Process
GO:0071339	MLL1 complex	-	ISO	Component
GO:2001244	positive regulation of intrinsic apoptotic signaling pathway	-	ISO	Process