EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000036992 (Gene tree)
Gene ID: 56488
Gene Symbol: Nxt1
Alias: 1110001N02Rik
Full Name: NTF2-related export protein 1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 3427 bases
Position: chr2:148672601-148676027
Accession: 1929619
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000038329	NTF2	PF02136.20	5.1e-30	1	1
ENSMUSP00000105587	NTF2	PF02136.20	5.1e-30	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000109961	-	1116	-	ENSMUSP00000105587	140 (aa)	-	Q9QZV9
ENSMUST00000047177	-	956	-	ENSMUSP00000038329	140 (aa)	-	Q9QZV9

Gene Model

Click here to download ENSMUSG00000036992's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03008	Ribosome biogenesis in eukaryotes	KEGG
mmu03013	RNA transport	KEGG
mmu03015	mRNA surveillance pathway	KEGG
mmu05164	Influenza A	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000036992's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000036992	Nxt1	99	74.638	ENSMUSG00000042271	Nxt2	97	74.638

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000036992	Nxt1	100	98.571	ENSG00000132661	NXT1	100	98.571	Homo_sapiens
ENSMUSG00000036992	Nxt1	100	97.857	ENSAMEG00000018729	NXT1	100	97.857	Ailuropoda_melanoleuca
ENSMUSG00000036992	Nxt1	100	97.857	ENSANAG00000010003	NXT1	100	97.857	Aotus_nancymaae
ENSMUSG00000036992	Nxt1	99	97.842	ENSBTAG00000004993	NXT1	99	97.842	Bos_taurus
ENSMUSG00000036992	Nxt1	100	97.857	ENSCJAG00000044836	NXT1	100	97.857	Callithrix_jacchus
ENSMUSG00000036992	Nxt1	100	96.429	ENSTSYG00000007592	NXT1	100	96.429	Carlito_syrichta
ENSMUSG00000036992	Nxt1	100	95.714	ENSCAPG00000012780	NXT1	100	95.714	Cavia_aperea
ENSMUSG00000036992	Nxt1	100	95.714	ENSCPOG00000008817	NXT1	100	95.714	Cavia_porcellus
ENSMUSG00000036992	Nxt1	100	97.857	ENSCCAG00000015478	NXT1	100	97.857	Cebus_capucinus
ENSMUSG00000036992	Nxt1	100	98.571	ENSCATG00000019026	NXT1	100	98.571	Cercocebus_atys
ENSMUSG00000036992	Nxt1	100	96.429	ENSCLAG00000012493	NXT1	100	96.429	Chinchilla_lanigera
ENSMUSG00000036992	Nxt1	100	98.571	ENSCSAG00000018678	NXT1	100	98.571	Chlorocebus_sabaeus
ENSMUSG00000036992	Nxt1	100	92.143	ENSCHOG00000007142	NXT1	100	92.143	Choloepus_hoffmanni
ENSMUSG00000036992	Nxt1	100	98.571	ENSCANG00000001309	NXT1	100	98.571	Colobus_angolensis_palliatus
ENSMUSG00000036992	Nxt1	100	76.923	ENSCGRG00001014411	-	100	76.923	Cricetulus_griseus_chok1gshd
ENSMUSG00000036992	Nxt1	100	96.429	ENSCGRG00001007062	-	100	96.429	Cricetulus_griseus_chok1gshd
ENSMUSG00000036992	Nxt1	100	96.429	ENSCGRG00000012771	-	100	96.429	Cricetulus_griseus_crigri
ENSMUSG00000036992	Nxt1	100	76.923	ENSCGRG00000005554	-	100	76.923	Cricetulus_griseus_crigri
ENSMUSG00000036992	Nxt1	99	57.857	ENSDNOG00000040022	-	98	57.857	Dasypus_novemcinctus
ENSMUSG00000036992	Nxt1	100	92.143	ENSDNOG00000015112	-	100	92.143	Dasypus_novemcinctus
ENSMUSG00000036992	Nxt1	100	98.571	ENSDORG00000024690	Nxt1	100	98.571	Dipodomys_ordii
ENSMUSG00000036992	Nxt1	100	96.429	ENSEASG00005002553	NXT1	100	96.429	Equus_asinus_asinus
ENSMUSG00000036992	Nxt1	100	96.429	ENSECAG00000035032	NXT1	100	96.429	Equus_caballus
ENSMUSG00000036992	Nxt1	99	94.928	ENSEEUG00000013818	NXT1	99	94.928	Erinaceus_europaeus
ENSMUSG00000036992	Nxt1	100	98.571	ENSFCAG00000006482	NXT1	100	98.571	Felis_catus
ENSMUSG00000036992	Nxt1	99	97.122	ENSFDAG00000012027	-	99	97.122	Fukomys_damarensis
ENSMUSG00000036992	Nxt1	96	80.000	ENSFDAG00000006553	-	97	80.000	Fukomys_damarensis
ENSMUSG00000036992	Nxt1	100	98.571	ENSGGOG00000012539	-	100	98.571	Gorilla_gorilla
ENSMUSG00000036992	Nxt1	76	83.019	ENSGGOG00000022722	-	80	83.019	Gorilla_gorilla
ENSMUSG00000036992	Nxt1	100	97.143	ENSHGLG00000007882	NXT1	100	97.143	Heterocephalus_glaber_female
ENSMUSG00000036992	Nxt1	100	97.143	ENSHGLG00100015157	NXT1	100	97.143	Heterocephalus_glaber_male
ENSMUSG00000036992	Nxt1	100	96.429	ENSSTOG00000026331	NXT1	100	96.429	Ictidomys_tridecemlineatus
ENSMUSG00000036992	Nxt1	100	98.571	ENSJJAG00000012022	-	100	98.571	Jaculus_jaculus
ENSMUSG00000036992	Nxt1	100	81.429	ENSJJAG00000013926	-	100	81.429	Jaculus_jaculus
ENSMUSG00000036992	Nxt1	100	95.000	ENSLAFG00000029098	NXT1	100	95.000	Loxodonta_africana
ENSMUSG00000036992	Nxt1	100	98.571	ENSMFAG00000019296	NXT1	100	98.571	Macaca_fascicularis
ENSMUSG00000036992	Nxt1	100	98.571	ENSMMUG00000022386	NXT1	100	98.571	Macaca_mulatta
ENSMUSG00000036992	Nxt1	100	98.571	ENSMNEG00000027745	NXT1	100	98.571	Macaca_nemestrina
ENSMUSG00000036992	Nxt1	100	98.571	ENSMLEG00000027268	NXT1	100	98.571	Mandrillus_leucophaeus
ENSMUSG00000036992	Nxt1	100	96.429	ENSMAUG00000004141	Nxt1	100	96.429	Mesocricetus_auratus
ENSMUSG00000036992	Nxt1	100	96.429	ENSMICG00000044853	NXT1	100	96.429	Microcebus_murinus
ENSMUSG00000036992	Nxt1	100	94.286	ENSMOCG00000018712	Nxt1	100	94.286	Microtus_ochrogaster
ENSMUSG00000036992	Nxt1	100	100.000	MGP_CAROLIEiJ_G0024408	Nxt1	100	100.000	Mus_caroli
ENSMUSG00000036992	Nxt1	100	98.571	MGP_PahariEiJ_G0025851	Nxt1	100	98.571	Mus_pahari
ENSMUSG00000036992	Nxt1	100	100.000	MGP_SPRETEiJ_G0025326	Nxt1	100	100.000	Mus_spretus
ENSMUSG00000036992	Nxt1	100	98.571	ENSMPUG00000019260	NXT1	100	98.571	Mustela_putorius_furo
ENSMUSG00000036992	Nxt1	100	97.857	ENSMLUG00000006881	NXT1	100	97.857	Myotis_lucifugus
ENSMUSG00000036992	Nxt1	100	98.571	ENSNGAG00000000803	Nxt1	100	98.571	Nannospalax_galili
ENSMUSG00000036992	Nxt1	100	96.429	ENSOPRG00000006167	NXT1	100	96.429	Ochotona_princeps
ENSMUSG00000036992	Nxt1	100	95.714	ENSODEG00000019900	NXT1	100	95.714	Octodon_degus
ENSMUSG00000036992	Nxt1	100	97.857	ENSOCUG00000025924	NXT1	100	97.857	Oryctolagus_cuniculus
ENSMUSG00000036992	Nxt1	100	97.143	ENSOGAG00000000717	NXT1	99	97.143	Otolemur_garnettii
ENSMUSG00000036992	Nxt1	100	98.571	ENSPPAG00000020479	NXT1	100	98.571	Pan_paniscus
ENSMUSG00000036992	Nxt1	100	98.571	ENSPPRG00000021392	NXT1	100	98.571	Panthera_pardus
ENSMUSG00000036992	Nxt1	100	98.571	ENSPTIG00000003788	NXT1	100	98.571	Panthera_tigris_altaica
ENSMUSG00000036992	Nxt1	100	98.571	ENSPTRG00000013319	NXT1	100	98.571	Pan_troglodytes
ENSMUSG00000036992	Nxt1	100	98.571	ENSPANG00000023254	NXT1	100	98.571	Papio_anubis
ENSMUSG00000036992	Nxt1	100	96.429	ENSPEMG00000010397	Nxt1	100	96.429	Peromyscus_maniculatus_bairdii
ENSMUSG00000036992	Nxt1	100	98.571	ENSPPYG00000010765	NXT1	100	98.571	Pongo_abelii
ENSMUSG00000036992	Nxt1	100	95.714	ENSPCAG00000009373	-	100	95.714	Procavia_capensis
ENSMUSG00000036992	Nxt1	100	98.571	ENSPCOG00000025624	NXT1	99	98.571	Propithecus_coquereli
ENSMUSG00000036992	Nxt1	100	97.857	ENSPVAG00000014055	NXT1	100	97.857	Pteropus_vampyrus
ENSMUSG00000036992	Nxt1	100	97.857	ENSRNOG00000004700	Nxt1	100	97.857	Rattus_norvegicus
ENSMUSG00000036992	Nxt1	100	98.571	ENSRBIG00000021433	NXT1	100	98.571	Rhinopithecus_bieti
ENSMUSG00000036992	Nxt1	100	98.571	ENSRROG00000026657	NXT1	100	98.571	Rhinopithecus_roxellana
ENSMUSG00000036992	Nxt1	100	97.857	ENSSBOG00000036378	NXT1	100	97.857	Saimiri_boliviensis_boliviensis
ENSMUSG00000036992	Nxt1	100	95.714	ENSSARG00000007842	NXT1	100	95.714	Sorex_araneus
ENSMUSG00000036992	Nxt1	99	97.122	ENSSSCG00000007119	NXT1	99	97.122	Sus_scrofa
ENSMUSG00000036992	Nxt1	100	99.286	ENSTBEG00000012251	NXT1	100	99.286	Tupaia_belangeri
ENSMUSG00000036992	Nxt1	99	98.561	ENSTTRG00000011348	NXT1	99	98.561	Tursiops_truncatus
ENSMUSG00000036992	Nxt1	100	97.857	ENSUAMG00000021860	NXT1	100	97.857	Ursus_americanus
ENSMUSG00000036992	Nxt1	100	97.857	ENSUMAG00000004062	NXT1	100	97.857	Ursus_maritimus
ENSMUSG00000036992	Nxt1	100	98.571	ENSVVUG00000012091	NXT1	100	98.571	Vulpes_vulpes

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005515	protein binding	11579093.15820316.	IPI	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005643	nuclear pore	11579093.	IDA	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0006405	RNA export from nucleus	11579093.	IDA	Process
GO:0006606	protein import into nucleus	21873635.	IBA	Process
GO:0006611	protein export from nucleus	10567585.	IDA	Process
GO:0006913	nucleocytoplasmic transport	21873635.	IBA	Process
GO:0008536	Ran GTPase binding	10567585.	IDA	Function
GO:0008565	protein transporter activity	21873635.	IBA	Function
GO:0015031	protein transport	-	IEA	Process
GO:0044613	nuclear pore central transport channel	21873635.	IBA	Component
GO:0051028	mRNA transport	-	IEA	Process