EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000037085 (Gene tree)
Gene ID: 68260
Gene Symbol: Trmt12
Alias: 4632406N01Rik|Tyw2
Full Name: tRNA methyltranferase 12
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 4454 bases
Position: chr15:58872674-58877127
Accession: 1915510
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000047831	Met_10	PF02475.16	1.1e-28	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000036937	-	4454	-	ENSMUSP00000047831	446 (aa)	-	Q8BG71

Gene Model

Click here to download ENSMUSG00000037085's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000037085's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000037085	Trmt12	98	81.007	ENSG00000183665	TRMT12	98	81.007	Homo_sapiens
ENSMUSG00000037085	Trmt12	93	51.332	ENSAPOG00000011979	trmt12	97	51.332	Acanthochromis_polyacanthus
ENSMUSG00000037085	Trmt12	97	79.724	ENSAMEG00000019612	TRMT12	97	79.724	Ailuropoda_melanoleuca
ENSMUSG00000037085	Trmt12	91	49.754	ENSACIG00000012982	trmt12	99	49.754	Amphilophus_citrinellus
ENSMUSG00000037085	Trmt12	91	50.739	ENSAOCG00000020570	trmt12	96	51.777	Amphiprion_ocellaris
ENSMUSG00000037085	Trmt12	91	50.493	ENSAPEG00000006335	trmt12	96	51.523	Amphiprion_percula
ENSMUSG00000037085	Trmt12	93	52.058	ENSATEG00000018316	trmt12	97	52.058	Anabas_testudineus
ENSMUSG00000037085	Trmt12	92	50.485	ENSACLG00000001008	trmt12	96	50.485	Astatotilapia_calliptera
ENSMUSG00000037085	Trmt12	93	52.358	ENSAMXG00000040366	trmt12	97	52.358	Astyanax_mexicanus
ENSMUSG00000037085	Trmt12	95	81.455	ENSBTAG00000020398	TRMT12	92	81.455	Bos_taurus
ENSMUSG00000037085	Trmt12	51	38.428	WBGene00009586	F40F9.10	51	37.395	Caenorhabditis_elegans
ENSMUSG00000037085	Trmt12	98	79.176	ENSCJAG00000022174	TRMT12	98	79.176	Callithrix_jacchus
ENSMUSG00000037085	Trmt12	97	79.032	ENSCAFG00000001040	TRMT12	99	79.032	Canis_familiaris
ENSMUSG00000037085	Trmt12	97	79.032	ENSCAFG00020006500	TRMT12	99	79.032	Canis_lupus_dingo
ENSMUSG00000037085	Trmt12	95	82.118	ENSCHIG00000016574	TRMT12	97	82.118	Capra_hircus
ENSMUSG00000037085	Trmt12	95	79.245	ENSCPOG00000026520	TRMT12	95	79.245	Cavia_porcellus
ENSMUSG00000037085	Trmt12	98	80.549	ENSCSAG00000018615	TRMT12	98	80.549	Chlorocebus_sabaeus
ENSMUSG00000037085	Trmt12	95	63.636	ENSCPBG00000014290	TRMT12	96	63.636	Chrysemys_picta_bellii
ENSMUSG00000037085	Trmt12	70	44.762	ENSCING00000019633	-	97	44.762	Ciona_intestinalis
ENSMUSG00000037085	Trmt12	72	46.250	ENSCSAVG00000000415	-	93	46.250	Ciona_savignyi
ENSMUSG00000037085	Trmt12	96	64.977	ENSCGRG00001014834	Trmt12	98	64.977	Cricetulus_griseus_chok1gshd
ENSMUSG00000037085	Trmt12	94	49.644	ENSCSEG00000002675	trmt12	94	49.644	Cynoglossus_semilaevis
ENSMUSG00000037085	Trmt12	93	50.120	ENSCVAG00000005590	trmt12	98	50.000	Cyprinodon_variegatus
ENSMUSG00000037085	Trmt12	93	50.000	ENSDARG00000060338	trmt12	96	53.480	Danio_rerio
ENSMUSG00000037085	Trmt12	95	74.648	ENSETEG00000009373	TRMT12	95	74.648	Echinops_telfairi
ENSMUSG00000037085	Trmt12	97	80.645	ENSEASG00005022441	TRMT12	99	80.645	Equus_asinus_asinus
ENSMUSG00000037085	Trmt12	97	75.289	ENSEEUG00000004844	TRMT12	97	75.289	Erinaceus_europaeus
ENSMUSG00000037085	Trmt12	93	50.240	ENSELUG00000004240	trmt12	99	51.145	Esox_lucius
ENSMUSG00000037085	Trmt12	63	64.311	ENSFALG00000003825	TRMT12	97	72.430	Ficedula_albicollis
ENSMUSG00000037085	Trmt12	97	78.802	ENSFDAG00000016647	TRMT12	99	78.802	Fukomys_damarensis
ENSMUSG00000037085	Trmt12	89	42.643	ENSFHEG00000017338	trmt12	96	42.643	Fundulus_heteroclitus
ENSMUSG00000037085	Trmt12	79	65.266	ENSGALG00000006773	TRMT12	76	65.266	Gallus_gallus
ENSMUSG00000037085	Trmt12	92	49.029	ENSGAFG00000020056	trmt12	96	49.029	Gambusia_affinis
ENSMUSG00000037085	Trmt12	87	52.591	ENSGACG00000017351	trmt12	100	51.220	Gasterosteus_aculeatus
ENSMUSG00000037085	Trmt12	97	63.087	ENSGAGG00000006032	TRMT12	99	63.087	Gopherus_agassizii
ENSMUSG00000037085	Trmt12	92	50.485	ENSHBUG00000016412	trmt12	96	50.485	Haplochromis_burtoni
ENSMUSG00000037085	Trmt12	97	79.724	ENSHGLG00000020498	TRMT12	99	79.724	Heterocephalus_glaber_female
ENSMUSG00000037085	Trmt12	97	79.954	ENSHGLG00100020132	TRMT12	99	79.954	Heterocephalus_glaber_male
ENSMUSG00000037085	Trmt12	92	50.000	ENSHCOG00000005050	trmt12	95	53.429	Hippocampus_comes
ENSMUSG00000037085	Trmt12	95	50.236	ENSIPUG00000018011	trmt12	91	50.236	Ictalurus_punctatus
ENSMUSG00000037085	Trmt12	98	80.137	ENSSTOG00000030617	TRMT12	99	80.822	Ictidomys_tridecemlineatus
ENSMUSG00000037085	Trmt12	93	49.760	ENSKMAG00000000891	trmt12	97	49.760	Kryptolebias_marmoratus
ENSMUSG00000037085	Trmt12	53	55.462	ENSLBEG00000017456	-	88	55.462	Labrus_bergylta
ENSMUSG00000037085	Trmt12	92	48.058	ENSLBEG00000028712	trmt12	96	48.058	Labrus_bergylta
ENSMUSG00000037085	Trmt12	97	56.726	ENSLACG00000015869	TRMT12	98	56.726	Latimeria_chalumnae
ENSMUSG00000037085	Trmt12	95	56.604	ENSLOCG00000015290	trmt12	99	56.604	Lepisosteus_oculatus
ENSMUSG00000037085	Trmt12	95	80.282	ENSLAFG00000012519	TRMT12	97	80.282	Loxodonta_africana
ENSMUSG00000037085	Trmt12	97	81.797	ENSMMUG00000015490	TRMT12	98	81.797	Macaca_mulatta
ENSMUSG00000037085	Trmt12	93	49.395	ENSMAMG00000020311	trmt12	97	49.395	Mastacembelus_armatus
ENSMUSG00000037085	Trmt12	92	50.485	ENSMZEG00005007349	trmt12	96	50.485	Maylandia_zebra
ENSMUSG00000037085	Trmt12	95	60.698	ENSMGAG00000004174	TRMT12	95	60.698	Meleagris_gallopavo
ENSMUSG00000037085	Trmt12	91	49.877	ENSMMOG00000000412	trmt12	96	49.877	Mola_mola
ENSMUSG00000037085	Trmt12	98	67.661	ENSMODG00000011798	-	89	67.661	Monodelphis_domestica
ENSMUSG00000037085	Trmt12	97	65.668	ENSMODG00000021403	-	97	65.668	Monodelphis_domestica
ENSMUSG00000037085	Trmt12	92	51.214	ENSMALG00000008668	trmt12	96	51.214	Monopterus_albus
ENSMUSG00000037085	Trmt12	97	97.685	MGP_CAROLIEiJ_G0019820	Trmt12	97	97.685	Mus_caroli
ENSMUSG00000037085	Trmt12	97	93.056	MGP_PahariEiJ_G0019829	Trmt12	97	93.056	Mus_pahari
ENSMUSG00000037085	Trmt12	100	99.103	MGP_SPRETEiJ_G0020717	Trmt12	100	99.103	Mus_spretus
ENSMUSG00000037085	Trmt12	97	80.184	ENSMPUG00000019150	TRMT12	97	80.184	Mustela_putorius_furo
ENSMUSG00000037085	Trmt12	97	77.419	ENSMLUG00000003753	TRMT12	99	77.419	Myotis_lucifugus
ENSMUSG00000037085	Trmt12	97	82.910	ENSNGAG00000014548	Trmt12	99	82.910	Nannospalax_galili
ENSMUSG00000037085	Trmt12	91	50.860	ENSNBRG00000021510	trmt12	95	50.860	Neolamprologus_brichardi
ENSMUSG00000037085	Trmt12	97	70.413	ENSOPRG00000008067	TRMT12	98	70.413	Ochotona_princeps
ENSMUSG00000037085	Trmt12	97	79.493	ENSODEG00000018933	TRMT12	99	79.493	Octodon_degus
ENSMUSG00000037085	Trmt12	92	50.971	ENSONIG00000002614	trmt12	96	50.971	Oreochromis_niloticus
ENSMUSG00000037085	Trmt12	97	66.364	ENSOANG00000009987	TRMT12	100	66.364	Ornithorhynchus_anatinus
ENSMUSG00000037085	Trmt12	99	72.483	ENSOCUG00000026379	TRMT12	99	72.483	Oryctolagus_cuniculus
ENSMUSG00000037085	Trmt12	92	50.483	ENSORLG00000001280	trmt12	96	50.361	Oryzias_latipes
ENSMUSG00000037085	Trmt12	92	50.242	ENSORLG00020000708	trmt12	96	50.242	Oryzias_latipes_hni
ENSMUSG00000037085	Trmt12	92	50.725	ENSORLG00015012344	trmt12	96	50.725	Oryzias_latipes_hsok
ENSMUSG00000037085	Trmt12	93	50.361	ENSOMEG00000015267	trmt12	95	50.361	Oryzias_melastigma
ENSMUSG00000037085	Trmt12	97	79.587	ENSOGAG00000015845	TRMT12	99	79.587	Otolemur_garnettii
ENSMUSG00000037085	Trmt12	95	54.374	ENSPKIG00000004640	trmt12	99	54.612	Paramormyrops_kingsleyae
ENSMUSG00000037085	Trmt12	58	65.556	ENSPSIG00000003476	TRMT12	99	65.556	Pelodiscus_sinensis
ENSMUSG00000037085	Trmt12	93	47.952	ENSPMGG00000016356	trmt12	94	47.952	Periophthalmus_magnuspinnatus
ENSMUSG00000037085	Trmt12	99	67.195	ENSPCIG00000002967	TRMT12	91	67.195	Phascolarctos_cinereus
ENSMUSG00000037085	Trmt12	97	46.172	ENSPFOG00000016931	trmt12	99	46.172	Poecilia_formosa
ENSMUSG00000037085	Trmt12	92	47.330	ENSPLAG00000020621	trmt12	96	47.330	Poecilia_latipinna
ENSMUSG00000037085	Trmt12	92	48.786	ENSPMEG00000000818	trmt12	96	48.786	Poecilia_mexicana
ENSMUSG00000037085	Trmt12	92	48.058	ENSPREG00000011621	trmt12	96	48.544	Poecilia_reticulata
ENSMUSG00000037085	Trmt12	98	81.236	ENSPPYG00000018866	TRMT12	98	81.236	Pongo_abelii
ENSMUSG00000037085	Trmt12	96	77.726	ENSPCAG00000000556	TRMT12	97	77.726	Procavia_capensis
ENSMUSG00000037085	Trmt12	97	78.802	ENSPVAG00000009149	TRMT12	98	78.802	Pteropus_vampyrus
ENSMUSG00000037085	Trmt12	91	50.246	ENSPNYG00000010696	trmt12	99	50.246	Pundamilia_nyererei
ENSMUSG00000037085	Trmt12	95	50.000	ENSPNAG00000019028	trmt12	99	50.000	Pygocentrus_nattereri
ENSMUSG00000037085	Trmt12	97	90.741	ENSRNOG00000008978	Trmt12	99	90.741	Rattus_norvegicus
ENSMUSG00000037085	Trmt12	96	67.523	ENSSHAG00000003345	TRMT12	95	67.523	Sarcophilus_harrisii
ENSMUSG00000037085	Trmt12	95	53.162	ENSSFOG00015006090	trmt12	99	53.162	Scleropages_formosus
ENSMUSG00000037085	Trmt12	93	50.363	ENSSMAG00000013247	trmt12	97	50.363	Scophthalmus_maximus
ENSMUSG00000037085	Trmt12	88	52.296	ENSSDUG00000006168	trmt12	92	52.296	Seriola_dumerili
ENSMUSG00000037085	Trmt12	92	50.971	ENSSLDG00000025007	trmt12	96	50.971	Seriola_lalandi_dorsalis
ENSMUSG00000037085	Trmt12	95	60.277	ENSSPUG00000005321	TRMT12	96	60.277	Sphenodon_punctatus
ENSMUSG00000037085	Trmt12	92	50.485	ENSSPAG00000009435	trmt12	93	50.485	Stegastes_partitus
ENSMUSG00000037085	Trmt12	95	56.235	ENSTGUG00000002280	TRMT12	99	57.176	Taeniopygia_guttata
ENSMUSG00000037085	Trmt12	96	48.724	ENSTRUG00000011548	trmt12	95	48.086	Takifugu_rubripes
ENSMUSG00000037085	Trmt12	97	47.926	ENSTNIG00000016866	trmt12	100	47.926	Tetraodon_nigroviridis
ENSMUSG00000037085	Trmt12	97	79.310	ENSUAMG00000002067	TRMT12	99	79.310	Ursus_americanus
ENSMUSG00000037085	Trmt12	97	80.184	ENSVPAG00000006519	TRMT12	98	80.184	Vicugna_pacos
ENSMUSG00000037085	Trmt12	97	77.829	ENSVVUG00000016790	TRMT12	97	77.829	Vulpes_vulpes
ENSMUSG00000037085	Trmt12	96	57.009	ENSXETG00000009641	trmt12	96	57.009	Xenopus_tropicalis
ENSMUSG00000037085	Trmt12	95	46.462	ENSXCOG00000016505	trmt12	99	46.462	Xiphophorus_couchianus
ENSMUSG00000037085	Trmt12	92	48.910	ENSXMAG00000025318	trmt12	96	48.910	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0008033	tRNA processing	-	IEA	Process
GO:0008175	tRNA methyltransferase activity	21873635.	IBA	Function
GO:0016740	transferase activity	-	IEA	Function
GO:0030488	tRNA methylation	21873635.	IBA	Process
GO:0031591	wybutosine biosynthetic process	21873635.	IBA	Process
GO:0102522	tRNA 4-demethylwyosine alpha-amino-alpha-carboxypropyltransferase activity	-	IEA	Function