EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSMUSG00000037197 (Gene tree)
Gene ID
76938
Gene Symbol
Rbm17
Alias
2700027J02Rik
Full Name
RNA binding motif protein 17
Gene Type
protein_coding
Species
Mus_musculus
Status
confidence
Strand
Minus strand
Length
18717 bases
Position
chr2:11585437-11604153
Accession
1924188
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMUSP00000041831RRM_1PF00076.220.000211
ENSMUSP00000041831G-patchPF01585.231.3e-1211
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
27768875High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem CellsnIC & mESC2016.09He CDOI: 10.1016/j.molcel.2016.09.034
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMUST00000131036-458--- (aa)--
ENSMUST00000150369-663--- (aa)--
ENSMUST00000156469-517-ENSMUSP00000117133118 (aa)-A2AP40
ENSMUST00000125808-447--- (aa)--
ENSMUST00000040314-1599-ENSMUSP00000041831405 (aa)-Q8JZX4
ENSMUST00000195047-347--- (aa)--
Gene Model
Click here to download ENSMUSG00000037197's gene model file
Pathways
Pathway IDPathway NameSource
mmu03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000037197's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMUSG00000037197Rbm1710098.272ENSG00000134453RBM1710099.057Homo_sapiens
ENSMUSG00000037197Rbm179982.310ENSAPOG00000007101rbm179982.512Acanthochromis_polyacanthus
ENSMUSG00000037197Rbm1710098.025ENSAMEG00000002107RBM1710098.025Ailuropoda_melanoleuca
ENSMUSG00000037197Rbm1710078.589ENSACIG00000006251rbm1710078.589Amphilophus_citrinellus
ENSMUSG00000037197Rbm1710082.439ENSAOCG00000014892rbm1710082.439Amphiprion_ocellaris
ENSMUSG00000037197Rbm1710082.439ENSAPEG00000022779rbm1710082.439Amphiprion_percula
ENSMUSG00000037197Rbm1710079.481ENSATEG00000004406rbm1710079.481Anabas_testudineus
ENSMUSG00000037197Rbm1710095.309ENSAPLG00000004190RBM1710095.309Anas_platyrhynchos
ENSMUSG00000037197Rbm178990.541ENSACAG00000005418RBM179990.811Anolis_carolinensis
ENSMUSG00000037197Rbm1710083.990ENSANAG00000019330-9892.562Aotus_nancymaae
ENSMUSG00000037197Rbm1710098.272ENSANAG00000030127RBM1710098.272Aotus_nancymaae
ENSMUSG00000037197Rbm1710078.431ENSACLG00000003928rbm1710078.431Astatotilapia_calliptera
ENSMUSG00000037197Rbm1710077.176ENSAMXG00000005853rbm1710079.765Astyanax_mexicanus
ENSMUSG00000037197Rbm1710096.296ENSBTAG00000011094-10096.296Bos_taurus
ENSMUSG00000037197Rbm1710097.778ENSBTAG00000021951RBM1710097.778Bos_taurus
ENSMUSG00000037197Rbm177434.323WBGene00010233F58B3.79132.992Caenorhabditis_elegans
ENSMUSG00000037197Rbm1710098.272ENSCJAG00000020573RBM1710098.272Callithrix_jacchus
ENSMUSG00000037197Rbm1710098.025ENSCAFG00000005206RBM1710098.025Canis_familiaris
ENSMUSG00000037197Rbm1710093.580ENSCAFG00020005420RBM1710093.580Canis_lupus_dingo
ENSMUSG00000037197Rbm1710097.778ENSCHIG00000023204-10097.778Capra_hircus
ENSMUSG00000037197Rbm1710095.062ENSCHIG00000019921-10095.062Capra_hircus
ENSMUSG00000037197Rbm1710098.272ENSTSYG00000001165RBM1710098.272Carlito_syrichta
ENSMUSG00000037197Rbm179675.578ENSCAPG00000006275RBM1710079.781Cavia_aperea
ENSMUSG00000037197Rbm1710094.608ENSCPOG00000005679RBM1710094.608Cavia_porcellus
ENSMUSG00000037197Rbm1710098.272ENSCCAG00000018655RBM1710098.272Cebus_capucinus
ENSMUSG00000037197Rbm1710098.272ENSCATG00000041566RBM1710098.272Cercocebus_atys
ENSMUSG00000037197Rbm1710098.765ENSCLAG00000012195RBM179998.765Chinchilla_lanigera
ENSMUSG00000037197Rbm1710098.272ENSCSAG00000013564RBM1710098.272Chlorocebus_sabaeus
ENSMUSG00000037197Rbm179278.610ENSCHOG00000005131RBM1710078.610Choloepus_hoffmanni
ENSMUSG00000037197Rbm1710094.321ENSCPBG00000019836RBM1710094.321Chrysemys_picta_bellii
ENSMUSG00000037197Rbm1710046.988ENSCSAVG00000008782-10045.411Ciona_savignyi
ENSMUSG00000037197Rbm179884.343ENSCANG00000023715-10084.343Colobus_angolensis_palliatus
ENSMUSG00000037197Rbm1710098.025ENSCANG00000030987RBM1710098.025Colobus_angolensis_palliatus
ENSMUSG00000037197Rbm1710099.506ENSCGRG00001013842Rbm1710099.506Cricetulus_griseus_chok1gshd
ENSMUSG00000037197Rbm1710076.049ENSCGRG00001009256-10074.074Cricetulus_griseus_chok1gshd
ENSMUSG00000037197Rbm1710099.506ENSCGRG00000006907Rbm1710099.506Cricetulus_griseus_crigri
ENSMUSG00000037197Rbm1710079.512ENSCSEG00000018164rbm1710079.810Cynoglossus_semilaevis
ENSMUSG00000037197Rbm1710074.020ENSCVAG00000002476rbm1710075.362Cyprinodon_variegatus
ENSMUSG00000037197Rbm1710078.588ENSDARG00000031346rbm1710078.588Danio_rerio
ENSMUSG00000037197Rbm1710097.778ENSDNOG00000035920RBM1710097.778Dasypus_novemcinctus
ENSMUSG00000037197Rbm179936.203FBgn0086683Spf459936.476Drosophila_melanogaster
ENSMUSG00000037197Rbm1710074.321ENSETEG00000006642RBM1710074.321Echinops_telfairi
ENSMUSG00000037197Rbm176370.732ENSEBUG00000010253rbm178570.732Eptatretus_burgeri
ENSMUSG00000037197Rbm1710093.350ENSEASG00005019205-10093.350Equus_asinus_asinus
ENSMUSG00000037197Rbm179294.652ENSEASG00005009236-10094.652Equus_asinus_asinus
ENSMUSG00000037197Rbm1710087.407ENSECAG00000001379-10087.407Equus_caballus
ENSMUSG00000037197Rbm1710081.728ENSECAG00000008939RBM1710084.444Equus_caballus
ENSMUSG00000037197Rbm178679.598ENSEEUG00000013077RBM1710079.598Erinaceus_europaeus
ENSMUSG00000037197Rbm1710077.778ENSELUG00000006440rbm1710077.778Esox_lucius
ENSMUSG00000037197Rbm1710098.025ENSFCAG00000031988RBM1710098.025Felis_catus
ENSMUSG00000037197Rbm1710094.074ENSFALG00000001790RBM1710094.074Ficedula_albicollis
ENSMUSG00000037197Rbm1710098.765ENSFDAG00000007470RBM1710098.765Fukomys_damarensis
ENSMUSG00000037197Rbm1710078.774ENSFHEG00000001266rbm1710077.855Fundulus_heteroclitus
ENSMUSG00000037197Rbm179975.772ENSGMOG00000008438rbm1710075.772Gadus_morhua
ENSMUSG00000037197Rbm1710095.062ENSGALG00000006332RBM1710095.062Gallus_gallus
ENSMUSG00000037197Rbm1710080.732ENSGAFG00000019879rbm1710080.732Gambusia_affinis
ENSMUSG00000037197Rbm179980.929ENSGACG00000019174rbm179980.929Gasterosteus_aculeatus
ENSMUSG00000037197Rbm1710094.321ENSGAGG00000019906RBM1710094.321Gopherus_agassizii
ENSMUSG00000037197Rbm1710082.927ENSHBUG00000016624rbm1710082.927Haplochromis_burtoni
ENSMUSG00000037197Rbm1710098.765ENSHGLG00000011580RBM1710098.765Heterocephalus_glaber_female
ENSMUSG00000037197Rbm1710075.802ENSHGLG00100010556-10074.074Heterocephalus_glaber_male
ENSMUSG00000037197Rbm1710098.765ENSHGLG00100010460RBM1710098.765Heterocephalus_glaber_male
ENSMUSG00000037197Rbm179978.520ENSHCOG00000010865rbm1710078.520Hippocampus_comes
ENSMUSG00000037197Rbm1710078.454ENSIPUG00000007699Rbm1710078.454Ictalurus_punctatus
ENSMUSG00000037197Rbm1710099.259ENSSTOG00000013591RBM1710099.259Ictidomys_tridecemlineatus
ENSMUSG00000037197Rbm1710099.506ENSJJAG00000022886Rbm1710099.506Jaculus_jaculus
ENSMUSG00000037197Rbm1710074.321ENSJJAG00000000993-10071.007Jaculus_jaculus
ENSMUSG00000037197Rbm1710078.293ENSKMAG00000021400rbm1710079.481Kryptolebias_marmoratus
ENSMUSG00000037197Rbm1710081.707ENSLBEG00000000881rbm1710079.245Labrus_bergylta
ENSMUSG00000037197Rbm179969.647ENSLACG00000017297RBM179969.647Latimeria_chalumnae
ENSMUSG00000037197Rbm1710086.765ENSLOCG00000015659rbm1710086.765Lepisosteus_oculatus
ENSMUSG00000037197Rbm1710098.034ENSLAFG00000011629RBM1710098.034Loxodonta_africana
ENSMUSG00000037197Rbm1710098.272ENSMFAG00000035521RBM1710098.272Macaca_fascicularis
ENSMUSG00000037197Rbm1710098.272ENSMMUG00000015152RBM1710098.272Macaca_mulatta
ENSMUSG00000037197Rbm1710098.272ENSMNEG00000017264RBM1710098.272Macaca_nemestrina
ENSMUSG00000037197Rbm1710098.272ENSMLEG00000029340RBM1710098.272Mandrillus_leucophaeus
ENSMUSG00000037197Rbm1710078.538ENSMAMG00000000387rbm1710078.538Mastacembelus_armatus
ENSMUSG00000037197Rbm1710081.043ENSMZEG00005015179rbm1710081.043Maylandia_zebra
ENSMUSG00000037197Rbm1710094.363ENSMGAG00000003981RBM1710094.363Meleagris_gallopavo
ENSMUSG00000037197Rbm1710099.506ENSMAUG00000019247Rbm1710099.506Mesocricetus_auratus
ENSMUSG00000037197Rbm1710097.778ENSMICG00000003976-10097.778Microcebus_murinus
ENSMUSG00000037197Rbm1710090.465ENSMICG00000041489-10090.465Microcebus_murinus
ENSMUSG00000037197Rbm179381.067ENSMOCG00000014517-9981.067Microtus_ochrogaster
ENSMUSG00000037197Rbm1710099.506ENSMOCG00000011847Rbm1710099.506Microtus_ochrogaster
ENSMUSG00000037197Rbm1710074.458ENSMMOG00000010264rbm1710073.253Mola_mola
ENSMUSG00000037197Rbm1710096.790ENSMODG00000016648RBM1710096.790Monodelphis_domestica
ENSMUSG00000037197Rbm1710078.353ENSMALG00000010597rbm1710078.353Monopterus_albus
ENSMUSG00000037197Rbm17100100.000MGP_CAROLIEiJ_G0023173Rbm17100100.000Mus_caroli
ENSMUSG00000037197Rbm1710099.259MGP_PahariEiJ_G0019233Rbm1710099.259Mus_pahari
ENSMUSG00000037197Rbm17100100.000MGP_SPRETEiJ_G0024091Rbm17100100.000Mus_spretus
ENSMUSG00000037197Rbm178697.143ENSMPUG00000016359RBM179797.143Mustela_putorius_furo
ENSMUSG00000037197Rbm1710092.346ENSMLUG00000025709-10092.346Myotis_lucifugus
ENSMUSG00000037197Rbm1710096.059ENSMLUG00000002302-10096.059Myotis_lucifugus
ENSMUSG00000037197Rbm1710068.395ENSNGAG00000000663-10067.980Nannospalax_galili
ENSMUSG00000037197Rbm1710099.506ENSNGAG00000000741Rbm1710099.506Nannospalax_galili
ENSMUSG00000037197Rbm1710077.206ENSNBRG00000018148rbm1710077.206Neolamprologus_brichardi
ENSMUSG00000037197Rbm1710098.272ENSNLEG00000033350RBM1710098.272Nomascus_leucogenys
ENSMUSG00000037197Rbm1710090.864ENSMEUG00000011347RBM1710090.864Notamacropus_eugenii
ENSMUSG00000037197Rbm1710084.691ENSOPRG00000002993RBM1710084.691Ochotona_princeps
ENSMUSG00000037197Rbm179775.573ENSODEG00000007286-9975.573Octodon_degus
ENSMUSG00000037197Rbm1710098.030ENSODEG00000004393RBM1710098.030Octodon_degus
ENSMUSG00000037197Rbm1710082.927ENSONIG00000011838rbm1710082.927Oreochromis_niloticus
ENSMUSG00000037197Rbm1710096.049ENSOANG00000015455RBM1710096.049Ornithorhynchus_anatinus
ENSMUSG00000037197Rbm1710080.425ENSORLG00000028798rbm1710080.425Oryzias_latipes
ENSMUSG00000037197Rbm1710080.425ENSORLG00020004593rbm179880.425Oryzias_latipes_hni
ENSMUSG00000037197Rbm1710082.927ENSORLG00015000033rbm1710082.927Oryzias_latipes_hsok
ENSMUSG00000037197Rbm1710080.189ENSOMEG00000012060rbm1710085.890Oryzias_melastigma
ENSMUSG00000037197Rbm1710098.025ENSOGAG00000015687RBM1710098.025Otolemur_garnettii
ENSMUSG00000037197Rbm1710097.778ENSOARG00000012975RBM1710097.778Ovis_aries
ENSMUSG00000037197Rbm1710098.272ENSPPAG00000032347RBM1710098.272Pan_paniscus
ENSMUSG00000037197Rbm1710098.025ENSPPRG00000010706RBM1710098.025Panthera_pardus
ENSMUSG00000037197Rbm1710098.025ENSPTIG00000007596RBM1710098.025Panthera_tigris_altaica
ENSMUSG00000037197Rbm1710098.272ENSPTRG00000002265RBM1710098.272Pan_troglodytes
ENSMUSG00000037197Rbm1710098.272ENSPANG00000023425RBM1710098.272Papio_anubis
ENSMUSG00000037197Rbm1710080.941ENSPKIG00000025526rbm1710080.516Paramormyrops_kingsleyae
ENSMUSG00000037197Rbm1710078.169ENSPKIG00000005048-10078.169Paramormyrops_kingsleyae
ENSMUSG00000037197Rbm1710092.892ENSPSIG00000012332RBM1710092.892Pelodiscus_sinensis
ENSMUSG00000037197Rbm1710077.262ENSPMGG00000007980rbm1710076.202Periophthalmus_magnuspinnatus
ENSMUSG00000037197Rbm1710099.506ENSPEMG00000014320Rbm1710099.506Peromyscus_maniculatus_bairdii
ENSMUSG00000037197Rbm1710096.560ENSPCIG00000019260-10096.560Phascolarctos_cinereus
ENSMUSG00000037197Rbm1710078.538ENSPFOG00000013271rbm1710079.245Poecilia_formosa
ENSMUSG00000037197Rbm1710079.481ENSPLAG00000004455rbm1710079.481Poecilia_latipinna
ENSMUSG00000037197Rbm1710081.463ENSPMEG00000014864rbm1710081.463Poecilia_mexicana
ENSMUSG00000037197Rbm1710077.830ENSPREG00000015589rbm1710078.538Poecilia_reticulata
ENSMUSG00000037197Rbm179971.216ENSPPYG00000019881-10070.968Pongo_abelii
ENSMUSG00000037197Rbm1710098.272ENSPPYG00000002067RBM1710098.272Pongo_abelii
ENSMUSG00000037197Rbm178169.725ENSPPYG00000019042-10069.419Pongo_abelii
ENSMUSG00000037197Rbm1710090.123ENSPCAG00000016879RBM1710090.123Procavia_capensis
ENSMUSG00000037197Rbm1710097.778ENSPCOG00000027881RBM1710097.778Propithecus_coquereli
ENSMUSG00000037197Rbm1710086.914ENSPVAG00000015499RBM1710085.432Pteropus_vampyrus
ENSMUSG00000037197Rbm1710075.802ENSPNYG00000015274rbm1710075.802Pundamilia_nyererei
ENSMUSG00000037197Rbm1710079.765ENSPNAG00000030046rbm1710079.765Pygocentrus_nattereri
ENSMUSG00000037197Rbm1710099.506ENSRNOG00000018767Rbm1710099.506Rattus_norvegicus
ENSMUSG00000037197Rbm1710098.272ENSRBIG00000043727RBM1710098.272Rhinopithecus_bieti
ENSMUSG00000037197Rbm1710098.272ENSRROG00000044142RBM1710098.272Rhinopithecus_roxellana
ENSMUSG00000037197Rbm1710087.192ENSSBOG00000023653-10087.192Saimiri_boliviensis_boliviensis
ENSMUSG00000037197Rbm1710098.025ENSSBOG00000031661-10098.025Saimiri_boliviensis_boliviensis
ENSMUSG00000037197Rbm1710096.798ENSSHAG00000012480-10096.798Sarcophilus_harrisii
ENSMUSG00000037197Rbm1710082.195ENSSFOG00015009892rbm1710082.195Scleropages_formosus
ENSMUSG00000037197Rbm1710078.378ENSSMAG00000012368rbm1710077.598Scophthalmus_maximus
ENSMUSG00000037197Rbm1710081.490ENSSDUG00000015015rbm1710081.490Seriola_dumerili
ENSMUSG00000037197Rbm1710081.490ENSSLDG00000014486rbm1710081.490Seriola_lalandi_dorsalis
ENSMUSG00000037197Rbm175977.500ENSSARG00000001792-10077.500Sorex_araneus
ENSMUSG00000037197Rbm179994.307ENSSPUG00000001036RBM179994.307Sphenodon_punctatus
ENSMUSG00000037197Rbm1710082.195ENSSPAG00000002338rbm1710082.195Stegastes_partitus
ENSMUSG00000037197Rbm1710097.531ENSSSCG00000011134RBM1710097.531Sus_scrofa
ENSMUSG00000037197Rbm1710094.321ENSTGUG00000002013RBM1710094.321Taeniopygia_guttata
ENSMUSG00000037197Rbm1710082.195ENSTRUG00000010698rbm1710082.195Takifugu_rubripes
ENSMUSG00000037197Rbm1710083.659ENSTNIG00000006892rbm1710083.659Tetraodon_nigroviridis
ENSMUSG00000037197Rbm1710076.543ENSTBEG00000014686RBM1710076.543Tupaia_belangeri
ENSMUSG00000037197Rbm179097.527ENSTTRG00000001344RBM1710097.527Tursiops_truncatus
ENSMUSG00000037197Rbm1710093.580ENSUAMG00000009499RBM1710093.580Ursus_americanus
ENSMUSG00000037197Rbm1710097.778ENSUMAG00000012237RBM1710097.778Ursus_maritimus
ENSMUSG00000037197Rbm1710083.457ENSVPAG00000005497RBM1710083.457Vicugna_pacos
ENSMUSG00000037197Rbm1710093.580ENSVVUG00000006780RBM179797.143Vulpes_vulpes
ENSMUSG00000037197Rbm179986.173ENSXETG00000018123rbm1710086.173Xenopus_tropicalis
ENSMUSG00000037197Rbm1710080.000ENSXMAG00000008674rbm1710080.732Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000375RNA splicing, via transesterification reactions9731529.TASProcess
GO:0000380alternative mRNA splicing, via spliceosome21873635.IBAProcess
GO:0000380alternative mRNA splicing, via spliceosome-ISOProcess
GO:0000381regulation of alternative mRNA splicing, via spliceosome21873635.IBAProcess
GO:0003676nucleic acid binding-IEAFunction
GO:0003723RNA binding-IEAFunction
GO:0005515protein binding18337722.IPIFunction
GO:0005634nucleus18337722.IDAComponent
GO:0005654nucleoplasm-ISOComponent
GO:0005681spliceosomal complex-IEAComponent
GO:0006281DNA repair21873635.IBAProcess
GO:0006397mRNA processing-IEAProcess
GO:0008380RNA splicing-IEAProcess
GO:0032991protein-containing complex18337722.IDAComponent
GO:0043484regulation of RNA splicing-IEAProcess

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