EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000037253 (Gene tree)
Gene ID: 240396
Gene Symbol: Mex3c
Alias: A130001D14Rik|BM-013|Rkhd2
Full Name: mex3 RNA binding family member C
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Plus strand
Length: 19532 bases
Position: chr18:73573044-73592575
Accession: 2652843
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000089463	KH_1	PF00013.29	7.2e-26	1	2
ENSMUSP00000089463	KH_1	PF00013.29	7.2e-26	2	2

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000091852	-	3738	-	ENSMUSP00000089463	652 (aa)	-	Q05A36

Gene Model

Click here to download ENSMUSG00000037253's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000037253's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000037253	Mex3c	67	57.843	ENSMUSG00000057706	Mex3b	89	59.020
ENSMUSG00000037253	Mex3c	69	49.348	ENSMUSG00000074480	Mex3a	77	50.112
ENSMUSG00000037253	Mex3c	67	52.227	ENSMUSG00000048696	Mex3d	68	52.033

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000037253	Mex3c	95	94.108	ENSG00000176624	MEX3C	100	97.546	Homo_sapiens
ENSMUSG00000037253	Mex3c	68	99.550	ENSAMEG00000002897	MEX3C	99	99.550	Ailuropoda_melanoleuca
ENSMUSG00000037253	Mex3c	64	78.922	ENSAPLG00000003916	MEX3C	100	77.995	Anas_platyrhynchos
ENSMUSG00000037253	Mex3c	64	93.399	ENSACAG00000010265	MEX3C	98	93.399	Anolis_carolinensis
ENSMUSG00000037253	Mex3c	95	91.256	ENSANAG00000031189	MEX3C	82	98.276	Aotus_nancymaae
ENSMUSG00000037253	Mex3c	95	90.566	ENSBTAG00000014886	MEX3C	95	91.195	Bos_taurus
ENSMUSG00000037253	Mex3c	95	95.048	ENSCJAG00000001902	MEX3C	100	97.656	Callithrix_jacchus
ENSMUSG00000037253	Mex3c	75	94.045	ENSCAFG00000000162	MEX3C	99	99.022	Canis_familiaris
ENSMUSG00000037253	Mex3c	75	96.715	ENSCAFG00020021673	MEX3C	80	94.605	Canis_lupus_dingo
ENSMUSG00000037253	Mex3c	95	91.415	ENSCHIG00000017962	MEX3C	95	91.325	Capra_hircus
ENSMUSG00000037253	Mex3c	64	98.925	ENSCAPG00000007002	MEX3C	100	98.925	Cavia_aperea
ENSMUSG00000037253	Mex3c	92	94.842	ENSCPOG00000009646	MEX3C	98	93.511	Cavia_porcellus
ENSMUSG00000037253	Mex3c	95	95.541	ENSCCAG00000034228	MEX3C	97	98.221	Cebus_capucinus
ENSMUSG00000037253	Mex3c	95	94.904	ENSCATG00000031557	MEX3C	92	94.577	Cercocebus_atys
ENSMUSG00000037253	Mex3c	85	96.953	ENSCLAG00000006969	MEX3C	99	96.953	Chinchilla_lanigera
ENSMUSG00000037253	Mex3c	100	94.286	ENSCSAG00000018097	MEX3C	95	94.577	Chlorocebus_sabaeus
ENSMUSG00000037253	Mex3c	84	97.455	ENSCHOG00000004915	MEX3C	100	97.455	Choloepus_hoffmanni
ENSMUSG00000037253	Mex3c	71	94.444	ENSCPBG00000025611	MEX3C	100	94.444	Chrysemys_picta_bellii
ENSMUSG00000037253	Mex3c	87	97.193	ENSCANG00000033743	MEX3C	100	97.193	Colobus_angolensis_palliatus
ENSMUSG00000037253	Mex3c	100	96.956	ENSCGRG00001014162	Mex3c	100	96.956	Cricetulus_griseus_chok1gshd
ENSMUSG00000037253	Mex3c	64	99.731	ENSCGRG00000018775	Mex3c	100	99.731	Cricetulus_griseus_crigri
ENSMUSG00000037253	Mex3c	95	94.560	ENSDNOG00000006544	MEX3C	95	94.240	Dasypus_novemcinctus
ENSMUSG00000037253	Mex3c	64	99.462	ENSDORG00000025473	Mex3c	100	99.462	Dipodomys_ordii
ENSMUSG00000037253	Mex3c	64	97.052	ENSETEG00000003647	MEX3C	100	97.052	Echinops_telfairi
ENSMUSG00000037253	Mex3c	95	95.353	ENSECAG00000021727	MEX3C	95	95.353	Equus_caballus
ENSMUSG00000037253	Mex3c	64	99.263	ENSEEUG00000010864	MEX3C	100	99.263	Erinaceus_europaeus
ENSMUSG00000037253	Mex3c	67	63.169	ENSELUG00000020179	MEX3C	76	63.812	Esox_lucius
ENSMUSG00000037253	Mex3c	95	93.175	ENSFCAG00000027546	MEX3C	95	92.063	Felis_catus
ENSMUSG00000037253	Mex3c	69	97.339	ENSFDAG00000021094	MEX3C	100	99.462	Fukomys_damarensis
ENSMUSG00000037253	Mex3c	71	94.218	ENSGAGG00000019588	MEX3C	100	94.433	Gopherus_agassizii
ENSMUSG00000037253	Mex3c	68	99.548	ENSGGOG00000014875	-	100	99.548	Gorilla_gorilla
ENSMUSG00000037253	Mex3c	95	94.686	ENSHGLG00000004567	MEX3C	96	93.237	Heterocephalus_glaber_female
ENSMUSG00000037253	Mex3c	64	98.925	ENSHGLG00100015059	MEX3C	100	98.925	Heterocephalus_glaber_male
ENSMUSG00000037253	Mex3c	85	98.201	ENSSTOG00000022325	MEX3C	100	98.201	Ictidomys_tridecemlineatus
ENSMUSG00000037253	Mex3c	78	97.266	ENSJJAG00000005241	Mex3c	100	98.925	Jaculus_jaculus
ENSMUSG00000037253	Mex3c	64	78.883	ENSLACG00000007331	MEX3C	100	78.883	Latimeria_chalumnae
ENSMUSG00000037253	Mex3c	75	66.928	ENSLOCG00000012879	MEX3C	82	66.468	Lepisosteus_oculatus
ENSMUSG00000037253	Mex3c	80	96.578	ENSLAFG00000027818	MEX3C	100	96.578	Loxodonta_africana
ENSMUSG00000037253	Mex3c	75	98.586	ENSMFAG00000042267	MEX3C	100	98.586	Macaca_fascicularis
ENSMUSG00000037253	Mex3c	77	98.211	ENSMMUG00000023652	MEX3C	100	99.462	Macaca_mulatta
ENSMUSG00000037253	Mex3c	95	94.745	ENSMNEG00000037450	MEX3C	99	98.088	Macaca_nemestrina
ENSMUSG00000037253	Mex3c	65	99.529	ENSMLEG00000040189	MEX3C	81	99.529	Mandrillus_leucophaeus
ENSMUSG00000037253	Mex3c	78	99.216	ENSMAUG00000016546	Mex3c	100	99.216	Mesocricetus_auratus
ENSMUSG00000037253	Mex3c	95	95.338	ENSMICG00000005815	MEX3C	99	97.471	Microcebus_murinus
ENSMUSG00000037253	Mex3c	80	99.040	ENSMOCG00000012424	Mex3c	100	99.380	Microtus_ochrogaster
ENSMUSG00000037253	Mex3c	94	87.937	ENSMODG00000011001	MEX3C	94	87.912	Monodelphis_domestica
ENSMUSG00000037253	Mex3c	100	98.624	MGP_CAROLIEiJ_G0022391	Mex3c	100	98.624	Mus_caroli
ENSMUSG00000037253	Mex3c	100	98.315	MGP_PahariEiJ_G0019119	Mex3c	100	98.315	Mus_pahari
ENSMUSG00000037253	Mex3c	100	99.693	MGP_SPRETEiJ_G0023303	Mex3c	100	99.693	Mus_spretus
ENSMUSG00000037253	Mex3c	71	99.140	ENSMPUG00000008769	MEX3C	100	99.140	Mustela_putorius_furo
ENSMUSG00000037253	Mex3c	71	90.020	ENSMLUG00000012585	MEX3C	94	90.020	Myotis_lucifugus
ENSMUSG00000037253	Mex3c	77	98.812	ENSNGAG00000002190	Mex3c	100	98.812	Nannospalax_galili
ENSMUSG00000037253	Mex3c	74	96.058	ENSNLEG00000029756	-	99	96.058	Nomascus_leucogenys
ENSMUSG00000037253	Mex3c	60	96.842	ENSMEUG00000015929	MEX3C	63	96.842	Notamacropus_eugenii
ENSMUSG00000037253	Mex3c	82	97.032	ENSODEG00000018398	MEX3C	100	98.707	Octodon_degus
ENSMUSG00000037253	Mex3c	64	96.814	ENSOANG00000008116	MEX3C	100	96.814	Ornithorhynchus_anatinus
ENSMUSG00000037253	Mex3c	80	95.376	ENSOCUG00000012549	-	100	98.712	Oryctolagus_cuniculus
ENSMUSG00000037253	Mex3c	65	91.253	ENSOCUG00000014295	-	100	91.253	Oryctolagus_cuniculus
ENSMUSG00000037253	Mex3c	71	98.707	ENSOGAG00000030858	MEX3C	100	98.707	Otolemur_garnettii
ENSMUSG00000037253	Mex3c	69	98.448	ENSOARG00000004676	MEX3C	99	98.448	Ovis_aries
ENSMUSG00000037253	Mex3c	76	90.726	ENSPPAG00000038467	-	98	96.247	Pan_paniscus
ENSMUSG00000037253	Mex3c	95	93.175	ENSPPRG00000012151	MEX3C	95	92.063	Panthera_pardus
ENSMUSG00000037253	Mex3c	75	85.569	ENSPTIG00000004865	MEX3C	99	85.569	Panthera_tigris_altaica
ENSMUSG00000037253	Mex3c	95	94.268	ENSPTRG00000010029	MEX3C	97	94.418	Pan_troglodytes
ENSMUSG00000037253	Mex3c	95	95.032	ENSPANG00000006226	MEX3C	99	98.088	Papio_anubis
ENSMUSG00000037253	Mex3c	81	54.643	ENSPKIG00000016813	MEX3C	76	61.803	Paramormyrops_kingsleyae
ENSMUSG00000037253	Mex3c	64	93.780	ENSPSIG00000014521	MEX3C	97	93.333	Pelodiscus_sinensis
ENSMUSG00000037253	Mex3c	64	99.731	ENSPEMG00000014770	-	100	99.731	Peromyscus_maniculatus_bairdii
ENSMUSG00000037253	Mex3c	77	98.235	ENSPEMG00000022227	-	100	98.235	Peromyscus_maniculatus_bairdii
ENSMUSG00000037253	Mex3c	95	92.271	ENSPCAG00000009258	MEX3C	94	91.465	Procavia_capensis
ENSMUSG00000037253	Mex3c	95	94.391	ENSPCOG00000027054	MEX3C	99	97.471	Propithecus_coquereli
ENSMUSG00000037253	Mex3c	95	93.429	ENSPVAG00000015135	MEX3C	95	93.750	Pteropus_vampyrus
ENSMUSG00000037253	Mex3c	71	99.784	ENSRNOG00000015777	Mex3c	100	99.784	Rattus_norvegicus
ENSMUSG00000037253	Mex3c	80	98.099	ENSRBIG00000034716	MEX3C	99	98.099	Rhinopithecus_bieti
ENSMUSG00000037253	Mex3c	75	98.586	ENSRROG00000035366	MEX3C	100	98.586	Rhinopithecus_roxellana
ENSMUSG00000037253	Mex3c	84	97.822	ENSSBOG00000024094	MEX3C	99	98.963	Saimiri_boliviensis_boliviensis
ENSMUSG00000037253	Mex3c	63	97.512	ENSSHAG00000009408	-	85	97.512	Sarcophilus_harrisii
ENSMUSG00000037253	Mex3c	69	58.811	ENSSFOG00015020715	MEX3C	90	61.028	Scleropages_formosus
ENSMUSG00000037253	Mex3c	64	99.017	ENSSARG00000006940	MEX3C	100	99.017	Sorex_araneus
ENSMUSG00000037253	Mex3c	71	92.751	ENSSPUG00000017527	MEX3C	100	92.751	Sphenodon_punctatus
ENSMUSG00000037253	Mex3c	100	94.419	ENSSSCG00000034427	MEX3C	95	94.409	Sus_scrofa
ENSMUSG00000037253	Mex3c	64	98.529	ENSTBEG00000014438	MEX3C	100	98.529	Tupaia_belangeri
ENSMUSG00000037253	Mex3c	82	97.765	ENSTTRG00000004570	MEX3C	82	97.765	Tursiops_truncatus
ENSMUSG00000037253	Mex3c	75	97.782	ENSUAMG00000014181	MEX3C	100	97.782	Ursus_americanus
ENSMUSG00000037253	Mex3c	62	99.265	ENSUMAG00000003137	MEX3C	95	99.265	Ursus_maritimus
ENSMUSG00000037253	Mex3c	64	93.612	ENSVPAG00000003137	MEX3C	100	93.612	Vicugna_pacos
ENSMUSG00000037253	Mex3c	67	99.091	ENSVVUG00000014636	MEX3C	94	99.091	Vulpes_vulpes
ENSMUSG00000037253	Mex3c	69	77.876	ENSXETG00000022367	mex3c	87	79.545	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003415	chondrocyte hypertrophy	22357625.	IMP	Process
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0016740	transferase activity	-	IEA	Function
GO:0045598	regulation of fat cell differentiation	22927639.	IGI	Process
GO:0045598	regulation of fat cell differentiation	22927639.	IMP	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:0097009	energy homeostasis	22927639.	IMP	Process