EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000037331 (Gene tree)
Gene ID: 73158
Gene Symbol: Larp1
Alias: 1810024J12Rik|3110040D16Rik|Larp
Full Name: La ribonucleoprotein domain family%2C member 1
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Plus strand
Length: 52971 bases
Position: chr11:58009064-58062034
Accession: 1890165
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000071421	La	PF05383.17	2e-20	1	1
ENSMUSP00000136673	La	PF05383.17	2.1e-20	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
25993413	Label-Free Protein RNA Interactome Analysis Identifies Khsrp Signaling Downstream of the p38/Mk2 Kinase Complex as a Critical Modulator of Cell Cycle Progression	IC & MEF	2015	Boucas J	DOI: 10.1371/journal.pone.0125745
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	RBDmap & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000071487	-	6614	-	ENSMUSP00000071421	1072 (aa)	-	Z4YJT3
ENSMUST00000140500	-	747	-	-	- (aa)	-	-
ENSMUST00000178636	-	6617	XM_006534334	ENSMUSP00000136673	1072 (aa)	XP_006534397	Q6ZQ58

Gene Model

Click here to download ENSMUSG00000037331's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000037331's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000037331	Larp1	89	94.979	ENSG00000155506	LARP1	100	94.951	Homo_sapiens
ENSMUSG00000037331	Larp1	88	82.143	ENSAPOG00000020685	larp1	99	82.143	Acanthochromis_polyacanthus
ENSMUSG00000037331	Larp1	89	95.193	ENSAMEG00000016673	LARP1	100	95.193	Ailuropoda_melanoleuca
ENSMUSG00000037331	Larp1	69	74.799	ENSACIG00000012994	larp1	94	75.374	Amphilophus_citrinellus
ENSMUSG00000037331	Larp1	77	70.388	ENSAOCG00000007792	larp1	98	70.623	Amphiprion_ocellaris
ENSMUSG00000037331	Larp1	99	64.551	ENSAPEG00000022246	larp1	100	64.551	Amphiprion_percula
ENSMUSG00000037331	Larp1	97	63.824	ENSATEG00000013523	larp1	98	63.611	Anabas_testudineus
ENSMUSG00000037331	Larp1	83	83.799	ENSAPLG00000007559	LARP1	100	83.799	Anas_platyrhynchos
ENSMUSG00000037331	Larp1	88	79.979	ENSACAG00000004071	LARP1	98	79.979	Anolis_carolinensis
ENSMUSG00000037331	Larp1	89	95.397	ENSANAG00000029949	LARP1	100	92.308	Aotus_nancymaae
ENSMUSG00000037331	Larp1	99	64.600	ENSACLG00000015256	larp1	98	67.203	Astatotilapia_calliptera
ENSMUSG00000037331	Larp1	88	70.440	ENSAMXG00000000859	larp1	97	66.413	Astyanax_mexicanus
ENSMUSG00000037331	Larp1	100	90.191	ENSBTAG00000008443	LARP1	100	90.009	Bos_taurus
ENSMUSG00000037331	Larp1	100	90.727	ENSCJAG00000004454	LARP1	100	90.455	Callithrix_jacchus
ENSMUSG00000037331	Larp1	89	95.908	ENSCAFG00000017639	LARP1	99	95.908	Canis_familiaris
ENSMUSG00000037331	Larp1	83	96.089	ENSCAFG00020023860	LARP1	100	96.089	Canis_lupus_dingo
ENSMUSG00000037331	Larp1	100	90.608	ENSCHIG00000014414	LARP1	100	90.314	Capra_hircus
ENSMUSG00000037331	Larp1	95	90.838	ENSTSYG00000013732	LARP1	99	91.719	Carlito_syrichta
ENSMUSG00000037331	Larp1	85	88.779	ENSCAPG00000013865	LARP1	92	88.779	Cavia_aperea
ENSMUSG00000037331	Larp1	89	96.222	ENSCPOG00000003377	LARP1	99	96.222	Cavia_porcellus
ENSMUSG00000037331	Larp1	100	90.818	ENSCCAG00000025201	LARP1	100	90.727	Cebus_capucinus
ENSMUSG00000037331	Larp1	100	87.364	ENSCATG00000030675	LARP1	93	94.979	Cercocebus_atys
ENSMUSG00000037331	Larp1	89	96.537	ENSCLAG00000012755	LARP1	97	96.537	Chinchilla_lanigera
ENSMUSG00000037331	Larp1	83	91.620	ENSCSAG00000010800	LARP1	100	91.508	Chlorocebus_sabaeus
ENSMUSG00000037331	Larp1	85	87.773	ENSCHOG00000012716	LARP1	92	87.773	Choloepus_hoffmanni
ENSMUSG00000037331	Larp1	95	77.657	ENSCPBG00000002173	LARP1	92	81.579	Chrysemys_picta_bellii
ENSMUSG00000037331	Larp1	89	95.084	ENSCANG00000037418	LARP1	93	95.084	Colobus_angolensis_palliatus
ENSMUSG00000037331	Larp1	100	97.388	ENSCGRG00001016913	Larp1	100	97.388	Cricetulus_griseus_chok1gshd
ENSMUSG00000037331	Larp1	86	92.165	ENSCGRG00000009916	Larp1	100	92.709	Cricetulus_griseus_crigri
ENSMUSG00000037331	Larp1	99	63.612	ENSCSEG00000016431	larp1	99	64.711	Cynoglossus_semilaevis
ENSMUSG00000037331	Larp1	99	63.571	ENSCVAG00000022687	larp1	98	64.098	Cyprinodon_variegatus
ENSMUSG00000037331	Larp1	92	65.431	ENSDARG00000101722	larp1	95	65.688	Danio_rerio
ENSMUSG00000037331	Larp1	100	89.483	ENSDNOG00000012073	LARP1	100	88.849	Dasypus_novemcinctus
ENSMUSG00000037331	Larp1	89	92.655	ENSDORG00000002897	Larp1	98	92.550	Dipodomys_ordii
ENSMUSG00000037331	Larp1	82	95.568	ENSETEG00000020251	LARP1	100	95.568	Echinops_telfairi
ENSMUSG00000037331	Larp1	100	90.736	ENSEASG00005001070	LARP1	100	90.282	Equus_asinus_asinus
ENSMUSG00000037331	Larp1	100	90.917	ENSECAG00000017002	LARP1	79	90.282	Equus_caballus
ENSMUSG00000037331	Larp1	87	89.722	ENSEEUG00000001065	LARP1	100	89.722	Erinaceus_europaeus
ENSMUSG00000037331	Larp1	99	63.258	ENSELUG00000019403	larp1	99	64.072	Esox_lucius
ENSMUSG00000037331	Larp1	100	90.653	ENSFCAG00000000592	LARP1	100	90.653	Felis_catus
ENSMUSG00000037331	Larp1	77	81.250	ENSFALG00000008335	LARP1	98	81.611	Ficedula_albicollis
ENSMUSG00000037331	Larp1	89	96.222	ENSFDAG00000021125	LARP1	99	96.222	Fukomys_damarensis
ENSMUSG00000037331	Larp1	63	53.333	ENSFHEG00000020307	larp1	92	62.865	Fundulus_heteroclitus
ENSMUSG00000037331	Larp1	99	78.558	ENSGALG00000040109	LARP1	99	78.216	Gallus_gallus
ENSMUSG00000037331	Larp1	99	77.488	ENSGAGG00000025113	LARP1	97	81.215	Gopherus_agassizii
ENSMUSG00000037331	Larp1	89	94.979	ENSGGOG00000006048	LARP1	93	94.979	Gorilla_gorilla
ENSMUSG00000037331	Larp1	99	64.982	ENSHBUG00000020762	larp1	97	69.118	Haplochromis_burtoni
ENSMUSG00000037331	Larp1	100	91.101	ENSHGLG00000006267	LARP1	100	91.017	Heterocephalus_glaber_female
ENSMUSG00000037331	Larp1	89	95.908	ENSHGLG00100014230	-	99	95.908	Heterocephalus_glaber_male
ENSMUSG00000037331	Larp1	98	75.570	ENSHGLG00100003395	-	91	77.744	Heterocephalus_glaber_male
ENSMUSG00000037331	Larp1	92	79.577	ENSHCOG00000010786	larp1	100	79.577	Hippocampus_comes
ENSMUSG00000037331	Larp1	97	62.595	ENSIPUG00000019105	Larp1	93	66.147	Ictalurus_punctatus
ENSMUSG00000037331	Larp1	89	93.494	ENSSTOG00000005678	LARP1	99	93.494	Ictidomys_tridecemlineatus
ENSMUSG00000037331	Larp1	100	87.814	ENSJJAG00000016950	Larp1	100	86.667	Jaculus_jaculus
ENSMUSG00000037331	Larp1	97	66.511	ENSKMAG00000018468	larp1	98	67.444	Kryptolebias_marmoratus
ENSMUSG00000037331	Larp1	99	63.937	ENSLBEG00000027172	larp1	98	64.213	Labrus_bergylta
ENSMUSG00000037331	Larp1	94	70.879	ENSLOCG00000012457	larp1	99	70.879	Lepisosteus_oculatus
ENSMUSG00000037331	Larp1	100	89.649	ENSLAFG00000008991	LARP1	100	89.805	Loxodonta_africana
ENSMUSG00000037331	Larp1	89	94.665	ENSMFAG00000031651	LARP1	93	94.665	Macaca_fascicularis
ENSMUSG00000037331	Larp1	89	91.109	ENSMMUG00000009411	LARP1	99	91.004	Macaca_mulatta
ENSMUSG00000037331	Larp1	90	90.937	ENSMNEG00000039294	LARP1	100	94.749	Macaca_nemestrina
ENSMUSG00000037331	Larp1	89	95.084	ENSMLEG00000035142	LARP1	93	95.084	Mandrillus_leucophaeus
ENSMUSG00000037331	Larp1	99	64.146	ENSMAMG00000021788	larp1	99	64.196	Mastacembelus_armatus
ENSMUSG00000037331	Larp1	99	64.600	ENSMZEG00005009345	larp1	98	67.203	Maylandia_zebra
ENSMUSG00000037331	Larp1	88	81.067	ENSMGAG00000005696	LARP1	99	81.067	Meleagris_gallopavo
ENSMUSG00000037331	Larp1	100	96.828	ENSMAUG00000001385	Larp1	100	96.828	Mesocricetus_auratus
ENSMUSG00000037331	Larp1	89	94.130	ENSMICG00000000837	LARP1	99	95.964	Microcebus_murinus
ENSMUSG00000037331	Larp1	100	97.108	ENSMOCG00000008920	Larp1	100	97.108	Microtus_ochrogaster
ENSMUSG00000037331	Larp1	88	59.198	ENSMMOG00000013364	larp1	95	53.183	Mola_mola
ENSMUSG00000037331	Larp1	89	83.091	ENSMODG00000008663	LARP1	99	83.091	Monodelphis_domestica
ENSMUSG00000037331	Larp1	99	64.337	ENSMALG00000017180	larp1	99	64.382	Monopterus_albus
ENSMUSG00000037331	Larp1	100	99.347	MGP_CAROLIEiJ_G0016383	Larp1	100	99.347	Mus_caroli
ENSMUSG00000037331	Larp1	100	98.791	MGP_PahariEiJ_G0017518	Larp1	100	98.791	Mus_pahari
ENSMUSG00000037331	Larp1	100	99.720	MGP_SPRETEiJ_G0017225	Larp1	100	99.720	Mus_spretus
ENSMUSG00000037331	Larp1	82	90.055	ENSMPUG00000013564	LARP1	99	89.834	Mustela_putorius_furo
ENSMUSG00000037331	Larp1	89	91.300	ENSMLUG00000002608	LARP1	100	91.300	Myotis_lucifugus
ENSMUSG00000037331	Larp1	90	91.598	ENSNGAG00000001098	Larp1	100	91.494	Nannospalax_galili
ENSMUSG00000037331	Larp1	90	66.767	ENSNBRG00000008963	larp1	95	67.795	Neolamprologus_brichardi
ENSMUSG00000037331	Larp1	89	91.832	ENSNLEG00000016588	LARP1	99	88.819	Nomascus_leucogenys
ENSMUSG00000037331	Larp1	89	76.996	ENSMEUG00000002957	LARP1	99	77.311	Notamacropus_eugenii
ENSMUSG00000037331	Larp1	89	96.118	ENSOPRG00000013014	LARP1	99	96.118	Ochotona_princeps
ENSMUSG00000037331	Larp1	89	95.383	ENSODEG00000010824	LARP1	99	95.383	Octodon_degus
ENSMUSG00000037331	Larp1	99	65.936	ENSONIG00000017308	larp1	99	65.659	Oreochromis_niloticus
ENSMUSG00000037331	Larp1	90	81.828	ENSOANG00000005096	LARP1	99	82.462	Ornithorhynchus_anatinus
ENSMUSG00000037331	Larp1	100	92.791	ENSOCUG00000013066	LARP1	100	92.699	Oryctolagus_cuniculus
ENSMUSG00000037331	Larp1	99	63.455	ENSORLG00000000824	larp1	98	70.581	Oryzias_latipes
ENSMUSG00000037331	Larp1	99	63.462	ENSORLG00020022241	larp1	99	63.462	Oryzias_latipes_hni
ENSMUSG00000037331	Larp1	99	62.100	ENSORLG00015007538	larp1	99	62.056	Oryzias_latipes_hsok
ENSMUSG00000037331	Larp1	97	63.483	ENSOMEG00000003134	larp1	97	63.290	Oryzias_melastigma
ENSMUSG00000037331	Larp1	89	95.488	ENSOGAG00000016750	LARP1	99	95.488	Otolemur_garnettii
ENSMUSG00000037331	Larp1	89	92.880	ENSOARG00000009893	LARP1	99	93.298	Ovis_aries
ENSMUSG00000037331	Larp1	89	94.979	ENSPPAG00000042993	LARP1	93	94.979	Pan_paniscus
ENSMUSG00000037331	Larp1	95	89.655	ENSPPRG00000009780	LARP1	96	92.894	Panthera_pardus
ENSMUSG00000037331	Larp1	95	89.655	ENSPTIG00000007013	LARP1	96	92.894	Panthera_tigris_altaica
ENSMUSG00000037331	Larp1	99	87.694	ENSPTRG00000017447	LARP1	93	95.068	Pan_troglodytes
ENSMUSG00000037331	Larp1	100	87.455	ENSPANG00000008080	LARP1	93	94.979	Papio_anubis
ENSMUSG00000037331	Larp1	96	66.951	ENSPKIG00000010096	larp1	99	66.024	Paramormyrops_kingsleyae
ENSMUSG00000037331	Larp1	98	61.266	ENSPKIG00000017153	-	99	62.391	Paramormyrops_kingsleyae
ENSMUSG00000037331	Larp1	95	62.924	ENSPMGG00000011599	larp1	98	63.619	Periophthalmus_magnuspinnatus
ENSMUSG00000037331	Larp1	89	94.340	ENSPEMG00000022523	Larp1	99	94.340	Peromyscus_maniculatus_bairdii
ENSMUSG00000037331	Larp1	97	79.569	ENSPCIG00000019242	LARP1	90	79.569	Phascolarctos_cinereus
ENSMUSG00000037331	Larp1	97	64.604	ENSPFOG00000005836	larp1	98	64.286	Poecilia_formosa
ENSMUSG00000037331	Larp1	97	65.097	ENSPLAG00000008936	larp1	98	64.501	Poecilia_latipinna
ENSMUSG00000037331	Larp1	97	64.786	ENSPMEG00000013656	larp1	98	64.647	Poecilia_mexicana
ENSMUSG00000037331	Larp1	86	68.476	ENSPREG00000005726	larp1	98	67.409	Poecilia_reticulata
ENSMUSG00000037331	Larp1	89	90.136	ENSPCAG00000006407	LARP1	99	90.136	Procavia_capensis
ENSMUSG00000037331	Larp1	89	87.408	ENSPCOG00000016949	LARP1	99	90.976	Propithecus_coquereli
ENSMUSG00000037331	Larp1	100	90.127	ENSPVAG00000002262	LARP1	100	90.127	Pteropus_vampyrus
ENSMUSG00000037331	Larp1	99	64.510	ENSPNYG00000007938	larp1	98	67.203	Pundamilia_nyererei
ENSMUSG00000037331	Larp1	99	65.217	ENSPNAG00000021427	larp1	99	65.634	Pygocentrus_nattereri
ENSMUSG00000037331	Larp1	89	94.869	ENSRNOG00000031544	Larp1	99	94.869	Rattus_norvegicus
ENSMUSG00000037331	Larp1	89	95.073	ENSRBIG00000038005	LARP1	93	94.979	Rhinopithecus_bieti
ENSMUSG00000037331	Larp1	89	94.979	ENSRROG00000034073	LARP1	100	95.084	Rhinopithecus_roxellana
ENSMUSG00000037331	Larp1	89	95.488	ENSSBOG00000019816	LARP1	100	91.745	Saimiri_boliviensis_boliviensis
ENSMUSG00000037331	Larp1	89	84.551	ENSSHAG00000011115	LARP1	100	84.551	Sarcophilus_harrisii
ENSMUSG00000037331	Larp1	98	64.597	ENSSFOG00015018058	-	98	64.991	Scleropages_formosus
ENSMUSG00000037331	Larp1	89	68.219	ENSSFOG00015020304	larp1	95	66.931	Scleropages_formosus
ENSMUSG00000037331	Larp1	94	63.372	ENSSMAG00000007468	larp1	98	63.478	Scophthalmus_maximus
ENSMUSG00000037331	Larp1	99	64.178	ENSSDUG00000000268	larp1	97	69.865	Seriola_dumerili
ENSMUSG00000037331	Larp1	82	69.222	ENSSLDG00000016505	larp1	97	69.448	Seriola_lalandi_dorsalis
ENSMUSG00000037331	Larp1	57	92.580	ENSSARG00000013907	-	89	92.638	Sorex_araneus
ENSMUSG00000037331	Larp1	99	74.260	ENSSPUG00000012179	-	88	80.341	Sphenodon_punctatus
ENSMUSG00000037331	Larp1	99	64.510	ENSSPAG00000003910	larp1	98	65.014	Stegastes_partitus
ENSMUSG00000037331	Larp1	100	90.472	ENSSSCG00000017069	LARP1	100	95.536	Sus_scrofa
ENSMUSG00000037331	Larp1	85	83.097	ENSTGUG00000000704	LARP1	100	83.097	Taeniopygia_guttata
ENSMUSG00000037331	Larp1	99	63.004	ENSTRUG00000009470	larp1	99	63.278	Takifugu_rubripes
ENSMUSG00000037331	Larp1	82	94.118	ENSTBEG00000003381	LARP1	99	94.118	Tupaia_belangeri
ENSMUSG00000037331	Larp1	88	95.643	ENSTTRG00000015934	LARP1	99	95.383	Tursiops_truncatus
ENSMUSG00000037331	Larp1	100	90.835	ENSUAMG00000019334	LARP1	100	90.835	Ursus_americanus
ENSMUSG00000037331	Larp1	88	92.624	ENSUMAG00000002934	LARP1	99	92.624	Ursus_maritimus
ENSMUSG00000037331	Larp1	83	96.089	ENSVVUG00000004644	LARP1	100	96.089	Vulpes_vulpes
ENSMUSG00000037331	Larp1	94	74.136	ENSXETG00000008413	larp1	95	74.850	Xenopus_tropicalis
ENSMUSG00000037331	Larp1	83	73.243	ENSXCOG00000004022	larp1	97	73.243	Xiphophorus_couchianus
ENSMUSG00000037331	Larp1	97	64.545	ENSXMAG00000018780	larp1	99	63.914	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000339	RNA cap binding	-	ISO	Function
GO:0000340	RNA 7-methylguanosine cap binding	-	ISO	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0003730	mRNA 3'-UTR binding	-	ISO	Function
GO:0005737	cytoplasm	10878606.	ISA	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0005844	polysome	-	ISO	Component
GO:0006413	translational initiation	-	ISO	Process
GO:0006417	regulation of translation	-	IEA	Process
GO:0008190	eukaryotic initiation factor 4E binding	-	ISO	Function
GO:0008283	cell proliferation	-	ISO	Process
GO:0008494	translation activator activity	-	ISO	Function
GO:0010494	cytoplasmic stress granule	-	ISO	Component
GO:0016239	positive regulation of macroautophagy	-	ISO	Process
GO:0017148	negative regulation of translation	-	ISO	Process
GO:0031369	translation initiation factor binding	-	ISO	Function
GO:0031929	TOR signaling	-	ISO	Process
GO:0031931	TORC1 complex	-	ISO	Component
GO:0038202	TORC1 signaling	-	ISO	Process
GO:0042788	polysomal ribosome	-	ISO	Component
GO:0043024	ribosomal small subunit binding	-	ISO	Function
GO:0045070	positive regulation of viral genome replication	-	ISO	Process
GO:0045947	negative regulation of translational initiation	-	ISO	Process
GO:0048027	mRNA 5'-UTR binding	-	ISO	Function
GO:0048255	mRNA stabilization	-	ISO	Process
GO:0072752	cellular response to rapamycin	-	ISO	Process
GO:1990928	response to amino acid starvation	-	ISO	Process