EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Gene Ontology

Description

Ensembl ID: ENSMUSG00000037405 (Gene tree)
Gene ID: 15894
Gene Symbol: Icam1
Alias: CD54|Icam-1|Ly-47|MALA-2
Full Name: intercellular adhesion molecule 1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 12833
Position: chr9: 21015985-21028817
Accession: 96392
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000215003	-	2203	-	-	- (aa)	-	-
ENSMUST00000086399	-	2535	-	ENSMUSP00000083587	537 (aa)	-	P13597

Gene Model

Click here to download ENSMUSG00000037405's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu04064	NF-kappa B signaling pathway	KEGG
mmu04514	Cell adhesion molecules (CAMs)	KEGG
mmu04650	Natural killer cell mediated cytotoxicity	KEGG
mmu04668	TNF signaling pathway	KEGG
mmu04670	Leukocyte transendothelial migration	KEGG
mmu04933	AGE-RAGE signaling pathway in diabetic complications	KEGG
mmu05143	African trypanosomiasis	KEGG
mmu05144	Malaria	KEGG
mmu05150	Staphylococcus aureus infection	KEGG
mmu05164	Influenza A	KEGG
mmu05166	Human T-cell leukemia virus 1 infection	KEGG
mmu05167	Kaposi sarcoma-associated herpesvirus infection	KEGG
mmu05169	Epstein-Barr virus infection	KEGG
mmu05323	Rheumatoid arthritis	KEGG
mmu05416	Viral myocarditis	KEGG
mmu05418	Fluid shear stress and atherosclerosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000037405's network

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001772	immunological synapse	14973438.	IDA	Component
GO:0002291	T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell	-	ISO	Process
GO:0002438	acute inflammatory response to antigenic stimulus	-	ISO	Process
GO:0002457	T cell antigen processing and presentation	2479693.	IDA	Process
GO:0002693	positive regulation of cellular extravasation	-	ISO	Process
GO:0005178	integrin binding	21873635.	IBA	Function
GO:0005178	integrin binding	23620790.	ISO	Function
GO:0005615	extracellular space	-	ISO	Component
GO:0005886	plasma membrane	-	ISO	Component
GO:0005887	integral component of plasma membrane	21873635.	IBA	Component
GO:0007155	cell adhesion	21873635.	IBA	Process
GO:0007155	cell adhesion	10528208.	IDA	Process
GO:0007155	cell adhesion	-	ISO	Process
GO:0007159	leukocyte cell-cell adhesion	8562500.	IMP	Process
GO:0007159	leukocyte cell-cell adhesion	-	ISO	Process
GO:0007605	sensory perception of sound	-	ISO	Process
GO:0008360	regulation of cell shape	-	ISO	Process
GO:0009897	external side of plasma membrane	16973387.18684012.	IDA	Component
GO:0009986	cell surface	-	ISO	Component
GO:0016020	membrane	-	IEA	Component
GO:0016021	integral component of membrane	-	IEA	Component
GO:0030155	regulation of cell adhesion	15249579.	IDA	Process
GO:0030838	positive regulation of actin filament polymerization	-	ISO	Process
GO:0033627	cell adhesion mediated by integrin	10601245.	IDA	Process
GO:0043547	positive regulation of GTPase activity	-	ISO	Process
GO:0044406	adhesion of symbiont to host	-	ISO	Process
GO:0044877	protein-containing complex binding	-	ISO	Function
GO:0045121	membrane raft	12763482.	IDA	Component
GO:0045429	positive regulation of nitric oxide biosynthetic process	-	ISO	Process
GO:0045907	positive regulation of vasoconstriction	-	ISO	Process
GO:0046813	receptor-mediated virion attachment to host cell	-	ISO	Process
GO:0050731	positive regulation of peptidyl-tyrosine phosphorylation	-	ISO	Process
GO:0051092	positive regulation of NF-kappaB transcription factor activity	-	ISO	Process
GO:0051926	negative regulation of calcium ion transport	-	ISO	Process
GO:0061028	establishment of endothelial barrier	-	ISO	Process
GO:0070062	extracellular exosome	-	ISO	Component
GO:0070374	positive regulation of ERK1 and ERK2 cascade	-	ISO	Process
GO:0071333	cellular response to glucose stimulus	17670746.	IDA	Process
GO:0072683	T cell extravasation	17344467.	IMP	Process
GO:0090557	establishment of endothelial intestinal barrier	-	ISO	Process
GO:0097368	establishment of Sertoli cell barrier	-	ISO	Process
GO:0098609	cell-cell adhesion	-	ISO	Process
GO:1900027	regulation of ruffle assembly	23372835.	IDA	Process
GO:1902042	negative regulation of extrinsic apoptotic signaling pathway via death domain receptors	-	ISO	Process
GO:1904646	cellular response to amyloid-beta	-	ISO	Process
GO:1904996	positive regulation of leukocyte adhesion to vascular endothelial cell	-	ISO	Process
GO:1990830	cellular response to leukemia inhibitory factor	20439489.	IEP	Process
GO:2000352	negative regulation of endothelial cell apoptotic process	-	ISO	Process