EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000037487 (Gene tree)
Gene ID: 70790
Gene Symbol: Ubr5
Alias: 4432411E13Rik|Edd|Edd1
Full Name: ubiquitin protein ligase E3 component n-recognin 5
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 111527 bases
Position: chr15:37967328-38078854
Accession: 1918040
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000154293	PABP	PF00658.18	2.5e-19	1	1
ENSMUSP00000105965	PABP	PF00658.18	2.5e-19	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000228292	-	707	-	-	- (aa)	-	-
ENSMUST00000228174	-	1360	-	-	- (aa)	-	-
ENSMUST00000228804	-	522	-	-	- (aa)	-	-
ENSMUST00000227143	-	596	-	ENSMUSP00000153778	142 (aa)	-	A0A2I3BPG8
ENSMUST00000226137	-	664	-	-	- (aa)	-	-
ENSMUST00000226629	-	457	-	-	- (aa)	-	-
ENSMUST00000110336	-	9242	XM_006520182	ENSMUSP00000105965	2792 (aa)	XP_006520245	E9Q2H1
ENSMUST00000228504	-	654	-	-	- (aa)	-	-
ENSMUST00000228101	-	634	-	-	- (aa)	-	-
ENSMUST00000226414	-	8397	XM_006520179	ENSMUSP00000154293	2798 (aa)	XP_006520242	A0A2I3BQS6
ENSMUST00000228029	-	2279	-	-	- (aa)	-	-
ENSMUST00000228368	-	2953	-	-	- (aa)	-	-
ENSMUST00000226369	-	3562	-	-	- (aa)	-	-
ENSMUST00000228333	-	507	-	ENSMUSP00000154132	101 (aa)	-	A0A2I3BQC1

Gene Model

Click here to download ENSMUSG00000037487's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu04120	Ubiquitin mediated proteolysis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000037487's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000037487	Ubr5	100	98.249	ENSG00000104517	UBR5	100	99.398	Homo_sapiens
ENSMUSG00000037487	Ubr5	100	87.191	ENSAPOG00000007770	ubr5	100	87.403	Acanthochromis_polyacanthus
ENSMUSG00000037487	Ubr5	100	97.782	ENSAMEG00000014808	UBR5	100	97.782	Ailuropoda_melanoleuca
ENSMUSG00000037487	Ubr5	91	88.337	ENSACIG00000003786	ubr5	100	88.180	Amphilophus_citrinellus
ENSMUSG00000037487	Ubr5	91	88.064	ENSAPEG00000007895	ubr5	100	88.104	Amphiprion_percula
ENSMUSG00000037487	Ubr5	91	88.810	ENSATEG00000024796	ubr5	100	88.850	Anabas_testudineus
ENSMUSG00000037487	Ubr5	99	96.326	ENSAPLG00000004191	UBR5	100	96.326	Anas_platyrhynchos
ENSMUSG00000037487	Ubr5	87	95.242	ENSACAG00000008995	UBR5	100	95.365	Anolis_carolinensis
ENSMUSG00000037487	Ubr5	100	98.215	ENSANAG00000032305	UBR5	100	98.215	Aotus_nancymaae
ENSMUSG00000037487	Ubr5	100	87.663	ENSACLG00000011122	ubr5	100	87.767	Astatotilapia_calliptera
ENSMUSG00000037487	Ubr5	91	88.422	ENSAMXG00000020014	ubr5	100	88.462	Astyanax_mexicanus
ENSMUSG00000037487	Ubr5	100	98.320	ENSBTAG00000021209	UBR5	100	98.320	Bos_taurus
ENSMUSG00000037487	Ubr5	100	98.178	ENSCJAG00000015960	UBR5	100	98.178	Callithrix_jacchus
ENSMUSG00000037487	Ubr5	100	98.213	ENSCAFG00000000619	UBR5	100	98.213	Canis_familiaris
ENSMUSG00000037487	Ubr5	100	98.107	ENSCAFG00020000901	UBR5	100	98.107	Canis_lupus_dingo
ENSMUSG00000037487	Ubr5	100	98.356	ENSCHIG00000020937	UBR5	100	98.356	Capra_hircus
ENSMUSG00000037487	Ubr5	99	97.886	ENSTSYG00000011411	UBR5	99	97.886	Carlito_syrichta
ENSMUSG00000037487	Ubr5	99	89.975	ENSCPOG00000009637	UBR5	100	89.975	Cavia_porcellus
ENSMUSG00000037487	Ubr5	100	98.356	ENSCCAG00000037120	UBR5	100	98.356	Cebus_capucinus
ENSMUSG00000037487	Ubr5	100	98.215	ENSCATG00000035969	UBR5	100	98.215	Cercocebus_atys
ENSMUSG00000037487	Ubr5	99	97.482	ENSCLAG00000005604	UBR5	99	97.482	Chinchilla_lanigera
ENSMUSG00000037487	Ubr5	100	98.353	ENSCSAG00000011959	UBR5	100	98.353	Chlorocebus_sabaeus
ENSMUSG00000037487	Ubr5	87	98.485	ENSCHOG00000013701	UBR5	87	98.485	Choloepus_hoffmanni
ENSMUSG00000037487	Ubr5	100	97.141	ENSCPBG00000026166	UBR5	100	97.141	Chrysemys_picta_bellii
ENSMUSG00000037487	Ubr5	100	41.543	ENSCING00000008630	-	100	41.325	Ciona_intestinalis
ENSMUSG00000037487	Ubr5	99	98.344	ENSCANG00000041171	UBR5	100	98.344	Colobus_angolensis_palliatus
ENSMUSG00000037487	Ubr5	97	99.647	ENSCGRG00001002960	Ubr5	99	99.647	Cricetulus_griseus_chok1gshd
ENSMUSG00000037487	Ubr5	99	94.327	ENSCGRG00000005867	Ubr5	99	94.327	Cricetulus_griseus_crigri
ENSMUSG00000037487	Ubr5	100	86.990	ENSCSEG00000008448	ubr5	98	87.027	Cynoglossus_semilaevis
ENSMUSG00000037487	Ubr5	91	88.570	ENSCVAG00000021987	ubr5	100	88.610	Cyprinodon_variegatus
ENSMUSG00000037487	Ubr5	100	89.051	ENSDARG00000018192	ubr5	100	89.087	Danio_rerio
ENSMUSG00000037487	Ubr5	99	95.364	ENSDNOG00000007897	UBR5	99	95.364	Dasypus_novemcinctus
ENSMUSG00000037487	Ubr5	99	98.092	ENSDORG00000007058	Ubr5	99	98.092	Dipodomys_ordii
ENSMUSG00000037487	Ubr5	56	52.305	FBgn0002431	hyd	94	52.472	Drosophila_melanogaster
ENSMUSG00000037487	Ubr5	78	100.000	ENSETEG00000020339	UBR5	77	100.000	Echinops_telfairi
ENSMUSG00000037487	Ubr5	100	98.250	ENSEASG00005001629	UBR5	100	98.250	Equus_asinus_asinus
ENSMUSG00000037487	Ubr5	91	98.314	ENSECAG00000015755	UBR5	100	98.314	Equus_caballus
ENSMUSG00000037487	Ubr5	91	88.597	ENSELUG00000005362	ubr5	100	88.636	Esox_lucius
ENSMUSG00000037487	Ubr5	100	98.356	ENSFCAG00000011214	UBR5	100	98.356	Felis_catus
ENSMUSG00000037487	Ubr5	99	97.042	ENSFALG00000005901	UBR5	99	97.042	Ficedula_albicollis
ENSMUSG00000037487	Ubr5	99	97.733	ENSFDAG00000014793	UBR5	99	97.733	Fukomys_damarensis
ENSMUSG00000037487	Ubr5	91	88.614	ENSFHEG00000019770	ubr5	100	88.653	Fundulus_heteroclitus
ENSMUSG00000037487	Ubr5	99	88.549	ENSGMOG00000018440	ubr5	100	88.614	Gadus_morhua
ENSMUSG00000037487	Ubr5	100	94.675	ENSGALG00000031282	UBR5	100	94.460	Gallus_gallus
ENSMUSG00000037487	Ubr5	99	88.420	ENSGACG00000004642	ubr5	100	88.420	Gasterosteus_aculeatus
ENSMUSG00000037487	Ubr5	99	97.986	ENSGGOG00000003058	UBR5	99	97.986	Gorilla_gorilla
ENSMUSG00000037487	Ubr5	87	89.076	ENSHBUG00000021803	ubr5	100	89.117	Haplochromis_burtoni
ENSMUSG00000037487	Ubr5	100	97.820	ENSHGLG00000010405	UBR5	100	97.820	Heterocephalus_glaber_female
ENSMUSG00000037487	Ubr5	99	96.292	ENSHGLG00100004167	UBR5	99	96.292	Heterocephalus_glaber_male
ENSMUSG00000037487	Ubr5	91	87.770	ENSHCOG00000014022	ubr5	100	87.809	Hippocampus_comes
ENSMUSG00000037487	Ubr5	87	87.562	ENSIPUG00000023090	ubr5	100	87.603	Ictalurus_punctatus
ENSMUSG00000037487	Ubr5	99	98.341	ENSSTOG00000005328	UBR5	99	98.341	Ictidomys_tridecemlineatus
ENSMUSG00000037487	Ubr5	100	97.999	ENSJJAG00000013619	Ubr5	100	97.999	Jaculus_jaculus
ENSMUSG00000037487	Ubr5	100	86.955	ENSKMAG00000001452	ubr5	100	86.919	Kryptolebias_marmoratus
ENSMUSG00000037487	Ubr5	100	86.233	ENSLBEG00000024613	ubr5	100	86.431	Labrus_bergylta
ENSMUSG00000037487	Ubr5	99	93.508	ENSLACG00000012137	UBR5	100	93.544	Latimeria_chalumnae
ENSMUSG00000037487	Ubr5	100	90.993	ENSLOCG00000009882	ubr5	100	91.206	Lepisosteus_oculatus
ENSMUSG00000037487	Ubr5	100	98.357	ENSMFAG00000044216	UBR5	100	98.357	Macaca_fascicularis
ENSMUSG00000037487	Ubr5	100	98.352	ENSMMUG00000020766	UBR5	100	98.352	Macaca_mulatta
ENSMUSG00000037487	Ubr5	100	98.321	ENSMNEG00000028834	UBR5	100	98.321	Macaca_nemestrina
ENSMUSG00000037487	Ubr5	100	98.357	ENSMLEG00000039922	UBR5	100	98.357	Mandrillus_leucophaeus
ENSMUSG00000037487	Ubr5	91	89.238	ENSMZEG00005025460	ubr5	100	89.277	Maylandia_zebra
ENSMUSG00000037487	Ubr5	79	96.206	ENSMGAG00000012296	-	100	96.206	Meleagris_gallopavo
ENSMUSG00000037487	Ubr5	100	98.070	ENSMAUG00000018902	Ubr5	100	98.070	Mesocricetus_auratus
ENSMUSG00000037487	Ubr5	100	98.249	ENSMICG00000014824	UBR5	100	98.249	Microcebus_murinus
ENSMUSG00000037487	Ubr5	100	98.356	ENSMOCG00000019809	Ubr5	100	98.356	Microtus_ochrogaster
ENSMUSG00000037487	Ubr5	91	86.371	ENSMMOG00000018266	ubr5	100	86.606	Mola_mola
ENSMUSG00000037487	Ubr5	99	97.013	ENSMODG00000005976	UBR5	100	97.013	Monodelphis_domestica
ENSMUSG00000037487	Ubr5	91	88.270	ENSMALG00000008018	ubr5	100	88.270	Monopterus_albus
ENSMUSG00000037487	Ubr5	100	99.500	MGP_CAROLIEiJ_G0019748	Ubr5	100	99.500	Mus_caroli
ENSMUSG00000037487	Ubr5	100	99.464	MGP_PahariEiJ_G0019757	Ubr5	100	99.464	Mus_pahari
ENSMUSG00000037487	Ubr5	100	99.893	MGP_SPRETEiJ_G0020645	Ubr5	100	99.893	Mus_spretus
ENSMUSG00000037487	Ubr5	91	98.192	ENSMPUG00000015136	UBR5	100	98.192	Mustela_putorius_furo
ENSMUSG00000037487	Ubr5	99	97.913	ENSMLUG00000008052	UBR5	100	97.913	Myotis_lucifugus
ENSMUSG00000037487	Ubr5	100	98.570	ENSNGAG00000001915	Ubr5	100	98.570	Nannospalax_galili
ENSMUSG00000037487	Ubr5	87	88.570	ENSNBRG00000001982	ubr5	100	88.611	Neolamprologus_brichardi
ENSMUSG00000037487	Ubr5	99	98.272	ENSNLEG00000003404	UBR5	100	98.272	Nomascus_leucogenys
ENSMUSG00000037487	Ubr5	69	97.890	ENSMEUG00000004964	-	71	96.094	Notamacropus_eugenii
ENSMUSG00000037487	Ubr5	84	100.000	ENSOPRG00000004459	UBR5	82	100.000	Ochotona_princeps
ENSMUSG00000037487	Ubr5	100	97.391	ENSODEG00000001200	UBR5	100	97.391	Octodon_degus
ENSMUSG00000037487	Ubr5	100	88.933	ENSONIG00000016431	ubr5	100	89.040	Oreochromis_niloticus
ENSMUSG00000037487	Ubr5	91	97.445	ENSOANG00000013340	-	100	97.445	Ornithorhynchus_anatinus
ENSMUSG00000037487	Ubr5	100	96.495	ENSOCUG00000008549	UBR5	99	96.495	Oryctolagus_cuniculus
ENSMUSG00000037487	Ubr5	100	87.118	ENSORLG00000003009	ubr5	100	87.189	Oryzias_latipes
ENSMUSG00000037487	Ubr5	91	88.706	ENSORLG00020022466	ubr5	100	88.627	Oryzias_latipes_hni
ENSMUSG00000037487	Ubr5	100	87.955	ENSORLG00015012347	ubr5	100	88.131	Oryzias_latipes_hsok
ENSMUSG00000037487	Ubr5	91	87.708	ENSOMEG00000014794	ubr5	100	87.866	Oryzias_melastigma
ENSMUSG00000037487	Ubr5	100	98.106	ENSOGAG00000004491	UBR5	100	98.106	Otolemur_garnettii
ENSMUSG00000037487	Ubr5	99	98.305	ENSOARG00000017554	UBR5	98	98.305	Ovis_aries
ENSMUSG00000037487	Ubr5	100	96.605	ENSPPAG00000040534	UBR5	100	96.605	Pan_paniscus
ENSMUSG00000037487	Ubr5	99	98.340	ENSPPRG00000001290	UBR5	100	98.340	Panthera_pardus
ENSMUSG00000037487	Ubr5	99	97.142	ENSPTIG00000016223	UBR5	99	97.142	Panthera_tigris_altaica
ENSMUSG00000037487	Ubr5	100	98.213	ENSPTRG00000020482	UBR5	100	98.213	Pan_troglodytes
ENSMUSG00000037487	Ubr5	100	98.353	ENSPANG00000017236	UBR5	100	98.353	Papio_anubis
ENSMUSG00000037487	Ubr5	86	86.835	ENSPKIG00000005940	ubr5	99	87.271	Paramormyrops_kingsleyae
ENSMUSG00000037487	Ubr5	100	83.723	ENSPKIG00000016015	UBR5	100	83.582	Paramormyrops_kingsleyae
ENSMUSG00000037487	Ubr5	99	97.018	ENSPSIG00000013244	UBR5	100	97.018	Pelodiscus_sinensis
ENSMUSG00000037487	Ubr5	100	85.484	ENSPMGG00000022205	ubr5	100	85.627	Periophthalmus_magnuspinnatus
ENSMUSG00000037487	Ubr5	100	98.429	ENSPEMG00000020823	Ubr5	100	98.429	Peromyscus_maniculatus_bairdii
ENSMUSG00000037487	Ubr5	91	88.302	ENSPFOG00000012957	ubr5	100	88.222	Poecilia_formosa
ENSMUSG00000037487	Ubr5	87	88.378	ENSPLAG00000008530	ubr5	100	88.419	Poecilia_latipinna
ENSMUSG00000037487	Ubr5	87	86.899	ENSPMEG00000019322	ubr5	100	86.940	Poecilia_mexicana
ENSMUSG00000037487	Ubr5	100	87.233	ENSPREG00000016584	ubr5	100	87.171	Poecilia_reticulata
ENSMUSG00000037487	Ubr5	97	99.049	ENSPPYG00000018797	UBR5	100	99.049	Pongo_abelii
ENSMUSG00000037487	Ubr5	81	98.065	ENSPCAG00000001160	UBR5	81	98.065	Procavia_capensis
ENSMUSG00000037487	Ubr5	100	97.036	ENSPCOG00000014399	UBR5	100	97.036	Propithecus_coquereli
ENSMUSG00000037487	Ubr5	90	100.000	ENSPVAG00000012646	UBR5	90	100.000	Pteropus_vampyrus
ENSMUSG00000037487	Ubr5	87	88.821	ENSPNYG00000004164	ubr5	100	88.862	Pundamilia_nyererei
ENSMUSG00000037487	Ubr5	91	87.441	ENSPNAG00000001318	ubr5	100	87.559	Pygocentrus_nattereri
ENSMUSG00000037487	Ubr5	87	97.000	ENSRNOG00000006816	Ubr5	100	97.000	Rattus_norvegicus
ENSMUSG00000037487	Ubr5	99	95.009	ENSRBIG00000038821	UBR5	100	95.234	Rhinopithecus_bieti
ENSMUSG00000037487	Ubr5	100	96.902	ENSRROG00000040919	UBR5	100	96.902	Rhinopithecus_roxellana
ENSMUSG00000037487	Ubr5	100	98.285	ENSSBOG00000025123	UBR5	100	98.285	Saimiri_boliviensis_boliviensis
ENSMUSG00000037487	Ubr5	100	97.181	ENSSHAG00000017701	UBR5	100	97.181	Sarcophilus_harrisii
ENSMUSG00000037487	Ubr5	91	88.020	ENSSFOG00015003412	ubr5	100	87.903	Scleropages_formosus
ENSMUSG00000037487	Ubr5	91	87.559	ENSSMAG00000010194	ubr5	100	87.598	Scophthalmus_maximus
ENSMUSG00000037487	Ubr5	91	88.727	ENSSDUG00000008072	ubr5	100	88.767	Seriola_dumerili
ENSMUSG00000037487	Ubr5	100	87.372	ENSSLDG00000013014	ubr5	100	88.727	Seriola_lalandi_dorsalis
ENSMUSG00000037487	Ubr5	91	100.000	ENSSARG00000000171	UBR5	91	100.000	Sorex_araneus
ENSMUSG00000037487	Ubr5	91	87.984	ENSSPAG00000015131	ubr5	100	88.023	Stegastes_partitus
ENSMUSG00000037487	Ubr5	100	98.281	ENSSSCG00000022479	UBR5	100	98.281	Sus_scrofa
ENSMUSG00000037487	Ubr5	99	96.792	ENSTGUG00000012099	UBR5	100	96.792	Taeniopygia_guttata
ENSMUSG00000037487	Ubr5	91	87.485	ENSTRUG00000010399	ubr5	100	87.408	Takifugu_rubripes
ENSMUSG00000037487	Ubr5	99	84.214	ENSTNIG00000013292	ubr5	100	84.430	Tetraodon_nigroviridis
ENSMUSG00000037487	Ubr5	89	100.000	ENSTBEG00000015656	UBR5	89	100.000	Tupaia_belangeri
ENSMUSG00000037487	Ubr5	87	100.000	ENSTTRG00000000492	UBR5	86	100.000	Tursiops_truncatus
ENSMUSG00000037487	Ubr5	98	97.672	ENSUMAG00000017960	UBR5	100	97.672	Ursus_maritimus
ENSMUSG00000037487	Ubr5	91	98.905	ENSVPAG00000008376	UBR5	95	98.905	Vicugna_pacos
ENSMUSG00000037487	Ubr5	98	98.072	ENSVVUG00000013461	UBR5	100	98.072	Vulpes_vulpes
ENSMUSG00000037487	Ubr5	100	93.851	ENSXETG00000031995	UBR5	100	94.065	Xenopus_tropicalis
ENSMUSG00000037487	Ubr5	76	100.000	ENSXCOG00000017034	ubr5	99	84.968	Xiphophorus_couchianus
ENSMUSG00000037487	Ubr5	87	88.255	ENSXMAG00000002429	ubr5	100	88.296	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000209	protein polyubiquitination	21873635.	IBA	Process
GO:0000209	protein polyubiquitination	-	ISO	Process
GO:0003723	RNA binding	-	IEA	Function
GO:0004842	ubiquitin-protein transferase activity	-	IEA	Function
GO:0005515	protein binding	25470037.	IPI	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005829	cytosol	-	ISO	Component
GO:0006281	DNA repair	-	IEA	Process
GO:0006974	cellular response to DNA damage stimulus	21873635.	IBA	Process
GO:0006974	cellular response to DNA damage stimulus	-	ISO	Process
GO:0008270	zinc ion binding	-	IEA	Function
GO:0010628	positive regulation of gene expression	18076571.	ISO	Process
GO:0016740	transferase activity	-	IEA	Function
GO:0031647	regulation of protein stability	25470037.	IMP	Process
GO:0032991	protein-containing complex	18076571.	ISO	Component
GO:0034450	ubiquitin-ubiquitin ligase activity	-	ISO	Function
GO:0042307	positive regulation of protein import into nucleus	-	ISO	Process
GO:0043130	ubiquitin binding	-	IEA	Function
GO:0046872	metal ion binding	-	IEA	Function
GO:0048471	perinuclear region of cytoplasm	18076571.	ISO	Component
GO:0050847	progesterone receptor signaling pathway	-	ISO	Process
GO:0061630	ubiquitin protein ligase activity	-	ISO	Function
GO:0070936	protein K48-linked ubiquitination	-	ISO	Process
GO:0090263	positive regulation of canonical Wnt signaling pathway	-	ISO	Process
GO:1901315	negative regulation of histone H2A K63-linked ubiquitination	21873635.	IBA	Process
GO:1901315	negative regulation of histone H2A K63-linked ubiquitination	-	ISO	Process
GO:1905077	negative regulation of interleukin-17 secretion	25470037.	IGI	Process
GO:2000780	negative regulation of double-strand break repair	-	ISO	Process